Wall clock time and date at job start Sat Mar 6 2021 18:54:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86293 * 109.47219 * 2 1 4 4 C 1.50700 * 109.47278 * 120.00368 * 2 1 3 5 5 C 1.37860 * 119.89044 * 65.29692 * 4 2 1 6 6 C 1.39665 * 119.87394 * 180.27745 * 5 4 2 7 7 C 1.47692 * 120.16388 * 179.69989 * 6 5 4 8 8 O 1.21569 * 119.99967 * 179.72810 * 7 6 5 9 9 N 1.34777 * 119.99889 * 359.72540 * 7 6 5 10 10 C 1.46501 * 119.99658 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.85330 * 23.79892 * 10 9 7 12 12 C 1.53778 * 113.61494 * 154.99701 * 10 9 7 13 13 C 1.53778 * 87.07998 * 89.11625 * 12 10 9 14 14 H 1.09001 * 113.61418 * 270.88308 * 13 12 10 15 15 O 1.42897 * 113.61684 * 139.98413 * 13 12 10 16 16 C 1.35900 * 117.00414 * 156.68201 * 15 13 12 17 17 C 1.38732 * 120.05568 * 5.42743 * 16 15 13 18 18 C 1.38144 * 119.94857 * 179.74534 * 17 16 15 19 19 C 1.38268 * 120.04933 * 0.51084 * 18 17 16 20 20 C 1.38259 * 120.11711 * 359.76597 * 19 18 17 21 21 C 1.38142 * 120.05290 * 359.97438 * 20 19 18 22 22 C 1.53775 * 87.08507 * 25.43234 * 13 12 10 23 23 C 1.39814 * 119.66593 * 359.42353 * 6 5 4 24 24 F 1.35104 * 120.10942 * 180.29701 * 23 6 5 25 25 C 1.38322 * 119.78352 * 0.27972 * 23 6 5 26 26 C 1.38206 * 120.11723 * 0.02562 * 25 23 6 27 27 H 0.96694 * 113.99372 * 299.99691 * 1 2 3 28 28 H 1.09003 * 109.46759 * 240.00017 * 2 1 3 29 29 H 1.48507 * 110.00113 * 300.00148 * 3 2 1 30 30 H 1.48496 * 110.00144 * 61.31969 * 3 2 1 31 31 H 1.07998 * 120.06175 * 359.97438 * 5 4 2 32 32 H 0.96997 * 120.00063 * 0.02562 * 9 7 6 33 33 H 1.08996 * 113.61283 * 334.56944 * 12 10 9 34 34 H 1.09000 * 113.61523 * 203.66198 * 12 10 9 35 35 H 1.08004 * 120.02520 * 359.97438 * 17 16 15 36 36 H 1.07997 * 119.97784 * 180.28083 * 18 17 16 37 37 H 1.08011 * 119.94282 * 179.74448 * 19 18 17 38 38 H 1.07998 * 119.97966 * 179.97438 * 20 19 18 39 39 H 1.08003 * 120.02757 * 180.02562 * 21 20 19 40 40 H 1.09002 * 113.61351 * 89.11168 * 22 13 12 41 41 H 1.08996 * 113.61665 * 220.02187 * 22 13 12 42 42 H 1.08007 * 119.94485 * 180.02562 * 25 23 6 43 43 H 1.07993 * 119.83192 * 180.02562 * 26 25 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.6895 -2.0580 1.3925 6 6 2.1502 -2.7148 2.5357 7 6 1.8889 -4.1569 2.7191 8 8 2.2956 -4.7267 3.7130 9 7 1.1996 -4.8410 1.7846 10 6 0.9399 -6.2712 1.9668 11 1 0.9673 -6.5765 3.0129 12 6 -0.3016 -6.7731 1.2110 13 6 0.6301 -7.0400 0.0171 14 1 0.7386 -6.1860 -0.6516 15 8 0.3391 -8.2554 -0.6758 16 6 0.7463 -8.3409 -1.9695 17 6 1.5098 -7.3251 -2.5262 18 6 1.9270 -7.4167 -3.8399 19 6 1.5754 -8.5149 -4.6030 20 6 0.8098 -9.5259 -4.0524 21 6 0.3946 -9.4414 -2.7375 22 6 1.7721 -7.1715 1.0385 23 6 2.8650 -2.0017 3.5029 24 9 3.3201 -2.6295 4.6093 25 6 3.1051 -0.6514 3.3230 26 6 2.6396 -0.0090 2.1914 27 1 -0.3932 0.4417 0.7651 28 1 1.7923 -0.5139 -0.8900 29 1 1.5615 2.4679 -1.2085 30 1 1.5880 2.4585 1.2242 31 1 1.1406 -2.6035 0.6393 32 1 0.8754 -4.3863 0.9915 33 1 -1.0416 -5.9955 1.0219 34 1 -0.7359 -7.6777 1.6366 35 1 1.7808 -6.4650 -1.9319 36 1 2.5251 -6.6284 -4.2724 37 1 1.8991 -8.5828 -5.6312 38 1 0.5361 -10.3824 -4.6505 39 1 -0.2031 -10.2317 -2.3076 40 1 1.9047 -8.1850 1.4170 41 1 2.7062 -6.7155 0.7103 42 1 3.6574 -0.0981 4.0683 43 1 2.8301 1.0453 2.0554 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11987230_12335834.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:54:49 Heat of formation + Delta-G solvation = -50.660062 kcal Electronic energy + Delta-G solvation = -29076.887530 eV Core-core repulsion = 24776.995204 eV Total energy + Delta-G solvation = -4299.892326 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.126 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -50.03509 -41.92122 -41.12012 -40.17803 -39.25151 -37.63926 -37.47062 -34.54437 -32.52494 -32.23657 -31.92108 -30.67912 -26.94070 -26.69253 -26.55716 -25.28927 -23.69859 -23.30244 -22.79399 -21.78779 -20.63583 -19.58666 -19.17899 -18.40230 -18.37353 -17.42544 -17.38195 -16.96670 -16.83365 -16.76460 -16.43500 -16.18408 -16.00388 -15.91870 -15.69924 -15.49610 -15.11380 -14.84927 -14.59731 -14.41748 -14.38111 -14.01279 -13.70911 -13.59046 -13.57043 -13.23899 -13.17899 -12.87532 -12.66091 -12.46654 -12.28993 -11.95567 -11.72728 -11.56418 -11.38824 -11.30195 -10.63610 -10.48040 -10.21089 -9.97318 -9.86867 -9.17595 -4.88139 -0.53125 -0.04972 0.37137 0.46678 1.30887 1.54127 1.62341 1.79822 2.01595 2.20013 2.43422 2.81651 3.02460 3.25282 3.29569 3.33567 3.42459 3.51787 3.59756 3.66645 3.68668 3.90668 3.97516 3.99274 4.07843 4.20532 4.30090 4.44495 4.47675 4.53055 4.57602 4.62360 4.64558 4.69760 4.73927 4.77405 4.81860 4.83710 4.89587 4.93368 5.06810 5.12167 5.29897 5.37693 5.46963 5.57509 5.60019 5.84887 6.25361 6.45610 6.49896 6.96254 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.074 4.074 3 Si 0.759 3.241 4 C -0.130 4.130 5 C -0.023 4.023 6 C -0.188 4.188 7 C 0.559 3.441 8 O -0.567 6.567 9 N -0.693 5.693 10 C 0.122 3.878 11 H 0.099 0.901 12 C -0.125 4.125 13 C 0.054 3.946 14 H 0.117 0.883 15 O -0.315 6.315 16 C 0.110 3.890 17 C -0.217 4.217 18 C -0.087 4.087 19 C -0.168 4.168 20 C -0.087 4.087 21 C -0.174 4.174 22 C -0.164 4.164 23 C 0.135 3.865 24 F -0.137 7.137 25 C -0.152 4.152 26 C -0.052 4.052 27 H 0.388 0.612 28 H 0.138 0.862 29 H -0.306 1.306 30 H -0.277 1.277 31 H 0.160 0.840 32 H 0.415 0.585 33 H 0.101 0.899 34 H 0.111 0.889 35 H 0.143 0.857 36 H 0.145 0.855 37 H 0.141 0.859 38 H 0.146 0.854 39 H 0.131 0.869 40 H 0.098 0.902 41 H 0.077 0.923 42 H 0.166 0.834 43 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.487 5.122 -5.281 7.373 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.184 4.184 3 Si 0.665 3.335 4 C -0.131 4.131 5 C -0.042 4.042 6 C -0.192 4.192 7 C 0.348 3.652 8 O -0.447 6.447 9 N -0.346 5.346 10 C 0.016 3.984 11 H 0.117 0.883 12 C -0.163 4.163 13 C -0.002 4.002 14 H 0.134 0.866 15 O -0.229 6.229 16 C 0.065 3.935 17 C -0.235 4.235 18 C -0.105 4.105 19 C -0.186 4.186 20 C -0.105 4.105 21 C -0.192 4.192 22 C -0.203 4.203 23 C 0.115 3.885 24 F -0.115 7.115 25 C -0.171 4.171 26 C -0.069 4.069 27 H 0.238 0.762 28 H 0.156 0.844 29 H -0.234 1.234 30 H -0.204 1.204 31 H 0.177 0.823 32 H 0.254 0.746 33 H 0.120 0.880 34 H 0.129 0.871 35 H 0.160 0.840 36 H 0.163 0.837 37 H 0.159 0.841 38 H 0.164 0.836 39 H 0.149 0.851 40 H 0.116 0.884 41 H 0.095 0.905 42 H 0.184 0.816 43 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges 0.554 5.050 -4.951 7.094 hybrid contribution -0.969 -0.220 0.656 1.191 sum -0.415 4.829 -4.296 6.477 Atomic orbital electron populations 1.86603 1.18031 1.80251 1.50353 1.25152 0.83674 1.11383 0.98155 0.94137 0.90296 0.72331 0.76736 1.20382 1.00579 0.94146 0.97967 1.21204 0.94583 0.94207 0.94183 1.19995 1.07117 0.93566 0.98543 1.18317 0.77682 0.86671 0.82574 1.90854 1.52245 1.70993 1.30571 1.45418 1.56050 1.09277 1.23842 1.21558 0.96640 0.79769 1.00421 0.88302 1.23548 0.96307 1.03194 0.93241 1.24377 0.97076 0.86674 0.92042 0.86581 1.86150 1.75841 1.39017 1.21852 1.19272 0.94828 0.95456 0.83905 1.21475 1.03756 1.00413 0.97896 1.21315 0.97741 0.98298 0.93146 1.21434 1.00853 0.94939 1.01411 1.21298 0.95990 0.99298 0.93947 1.20719 1.05191 0.98583 0.94720 1.23986 0.98363 1.01370 0.96542 1.18213 0.95449 0.91736 0.83141 1.91565 1.86334 1.82939 1.50657 1.21383 1.03308 0.91399 1.00966 1.21425 0.93240 1.01112 0.91151 0.76227 0.84431 1.23434 1.20351 0.82295 0.74592 0.88021 0.87083 0.83991 0.83736 0.84127 0.83648 0.85084 0.88355 0.90457 0.81620 0.81727 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 2.75 12.83 -148.98 -1.91 0.84 16 2 C -0.07 0.63 2.79 71.24 0.20 0.83 16 3 Si 0.76 -6.11 29.87 68.60 2.05 -4.06 16 4 C -0.13 0.93 5.34 -19.90 -0.11 0.82 16 5 C -0.02 0.12 9.17 22.52 0.21 0.33 16 6 C -0.19 -0.32 5.88 -20.05 -0.12 -0.44 16 7 C 0.56 3.25 7.77 86.74 0.67 3.93 16 8 O -0.57 -8.84 14.94 -3.93 -0.06 -8.90 16 9 N -0.69 1.13 5.21 -443.05 -2.31 -1.18 16 10 C 0.12 -0.05 4.32 45.52 0.20 0.15 16 11 H 0.10 0.40 7.46 -2.39 -0.02 0.38 16 12 C -0.13 0.47 7.66 31.12 0.24 0.70 16 13 C 0.05 -0.11 3.56 31.12 0.11 0.00 16 14 H 0.12 -0.67 5.95 -2.39 -0.01 -0.69 16 15 O -0.31 -1.24 10.15 -92.42 -0.94 -2.18 16 16 C 0.11 0.48 6.68 22.51 0.15 0.63 16 17 C -0.22 -0.25 9.02 22.37 0.20 -0.05 16 18 C -0.09 0.00 10.04 22.25 0.22 0.22 16 19 C -0.17 -0.07 10.04 22.28 0.22 0.16 16 20 C -0.09 -0.13 10.04 22.25 0.22 0.10 16 21 C -0.17 -0.70 9.99 22.37 0.22 -0.48 16 22 C -0.16 0.05 7.71 31.12 0.24 0.29 16 23 C 0.14 0.53 7.29 22.67 0.17 0.69 16 24 F -0.14 -1.53 15.55 44.97 0.70 -0.83 16 25 C -0.15 0.50 10.01 22.28 0.22 0.72 16 26 C -0.05 0.38 8.66 22.31 0.19 0.58 16 27 H 0.39 -3.87 8.70 -74.06 -0.64 -4.51 16 28 H 0.14 -1.52 7.96 -2.39 -0.02 -1.54 16 29 H -0.31 -0.33 7.11 99.48 0.71 0.38 16 30 H -0.28 1.28 7.00 99.48 0.70 1.98 16 31 H 0.16 -1.65 6.41 -2.91 -0.02 -1.66 16 32 H 0.42 -3.41 6.73 -92.71 -0.62 -4.03 16 33 H 0.10 -0.69 8.14 -2.39 -0.02 -0.71 16 34 H 0.11 -0.35 8.14 -2.39 -0.02 -0.37 16 35 H 0.14 -0.46 5.91 -2.91 -0.02 -0.47 16 36 H 0.14 -0.68 8.06 -2.91 -0.02 -0.71 16 37 H 0.14 -0.51 8.06 -2.91 -0.02 -0.53 16 38 H 0.15 -0.42 8.06 -2.91 -0.02 -0.44 16 39 H 0.13 0.34 8.06 -2.91 -0.02 0.32 16 40 H 0.10 0.13 8.14 -2.39 -0.02 0.11 16 41 H 0.08 0.01 8.14 -2.39 -0.02 -0.01 16 42 H 0.17 -1.18 8.06 -2.91 -0.02 -1.20 16 43 H 0.17 -2.01 4.82 -2.91 -0.01 -2.02 16 Total: 0.00 -23.69 365.45 0.84 -22.85 By element: Atomic # 1 Polarization: -15.57 SS G_CDS: -0.16 Total: -15.73 kcal Atomic # 6 Polarization: 5.72 SS G_CDS: 3.47 Total: 9.19 kcal Atomic # 7 Polarization: 1.13 SS G_CDS: -2.31 Total: -1.18 kcal Atomic # 8 Polarization: -7.34 SS G_CDS: -2.91 Total: -10.24 kcal Atomic # 9 Polarization: -1.53 SS G_CDS: 0.70 Total: -0.83 kcal Atomic # 14 Polarization: -6.11 SS G_CDS: 2.05 Total: -4.06 kcal Total: -23.69 0.84 -22.85 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_12335834.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.808 kcal (2) G-P(sol) polarization free energy of solvation -23.691 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.499 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.839 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.852 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.660 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds