Wall clock time and date at job start Sat Mar 6 2021 18:55:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86304 * 109.47054 * 2 1 4 4 C 1.50707 * 109.46823 * 240.00275 * 2 1 3 5 5 C 1.37941 * 119.91943 * 299.99814 * 4 2 1 6 6 C 1.39597 * 119.86964 * 180.02562 * 5 4 2 7 7 C 1.47855 * 120.13467 * 179.97438 * 6 5 4 8 8 O 1.21549 * 120.00378 * 359.97438 * 7 6 5 9 9 N 1.34776 * 119.99472 * 180.02562 * 7 6 5 10 10 C 1.46500 * 119.99920 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.84596 * 336.19474 * 10 9 7 12 12 C 1.53781 * 113.69255 * 107.45923 * 10 9 7 13 13 C 1.53782 * 87.08169 * 139.99585 * 12 10 9 14 14 H 1.09004 * 113.68639 * 220.01056 * 13 12 10 15 15 O 1.42896 * 113.61845 * 89.11663 * 13 12 10 16 16 C 1.35900 * 117.00374 * 105.83219 * 15 13 12 17 17 C 1.38736 * 120.05206 * 354.29846 * 16 15 13 18 18 C 1.38143 * 119.94187 * 179.97438 * 17 16 15 19 19 C 1.38260 * 120.05540 * 0.25206 * 18 17 16 20 20 C 1.38264 * 120.11546 * 359.49287 * 19 18 17 21 21 C 1.38149 * 120.05337 * 0.50794 * 20 19 18 22 22 C 1.53776 * 113.61864 * 204.99631 * 10 9 7 23 23 C 1.39536 * 119.72461 * 0.25285 * 6 5 4 24 24 C 1.38080 * 119.84228 * 359.45073 * 23 6 5 25 25 Br 1.89096 * 119.94207 * 180.29790 * 24 23 6 26 26 C 1.38358 * 119.92195 * 119.97796 * 4 2 1 27 27 H 0.96704 * 113.99976 * 59.99896 * 1 2 3 28 28 H 1.08997 * 109.47135 * 120.00079 * 2 1 3 29 29 H 1.48492 * 109.99951 * 60.00421 * 3 2 1 30 30 H 1.48502 * 109.99943 * 181.32285 * 3 2 1 31 31 H 1.07997 * 120.06336 * 0.02562 * 5 4 2 32 32 H 0.97000 * 120.00698 * 359.97438 * 9 7 6 33 33 H 1.08996 * 113.61458 * 25.44441 * 12 10 9 34 34 H 1.09004 * 113.61521 * 254.54488 * 12 10 9 35 35 H 1.08001 * 120.02622 * 359.95725 * 17 16 15 36 36 H 1.07999 * 119.96681 * 179.97438 * 18 17 16 37 37 H 1.08002 * 119.94288 * 179.72559 * 19 18 17 38 38 H 1.08001 * 119.97872 * 180.25150 * 20 19 18 39 39 H 1.07992 * 120.03166 * 179.72043 * 21 20 19 40 40 H 1.09000 * 113.61509 * 105.37998 * 22 10 9 41 41 H 1.09005 * 113.68844 * 334.49509 * 22 10 9 42 42 H 1.08001 * 120.08127 * 179.74781 * 23 6 5 43 43 H 1.07998 * 119.85983 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 1.5970 -2.0310 -1.4472 6 6 2.0633 -2.6882 -2.5872 7 6 1.7091 -4.1039 -2.8250 8 8 1.0109 -4.6980 -2.0268 9 7 2.1612 -4.7357 -3.9262 10 6 1.8098 -6.1383 -4.1622 11 1 1.5559 -6.6709 -3.2457 12 6 0.7875 -6.3372 -5.2936 13 6 1.6116 -7.5651 -5.7158 14 1 1.7129 -7.6742 -6.7957 15 8 1.2078 -8.7748 -5.0713 16 6 0.5140 -9.6714 -5.8207 17 6 0.1251 -9.3445 -7.1117 18 6 -0.5796 -10.2579 -7.8716 19 6 -0.9018 -11.4949 -7.3448 20 6 -0.5109 -11.8251 -6.0604 21 6 0.1940 -10.9153 -5.2963 22 6 2.8194 -6.8855 -5.0494 23 6 2.8698 -2.0052 -3.4983 24 6 3.1922 -0.6816 -3.2730 25 35 4.2781 0.2490 -4.5101 26 6 2.7262 -0.0363 -2.1405 27 1 -0.3933 0.4417 -0.7651 28 1 1.7923 -0.5138 0.8899 29 1 1.5616 2.4678 1.2085 30 1 3.5346 1.7703 -0.0322 31 1 0.9758 -2.5555 -0.7364 32 1 2.7187 -4.2618 -4.5630 33 1 0.7907 -5.5346 -6.0311 34 1 -0.2134 -6.5839 -4.9394 35 1 0.3728 -8.3767 -7.5220 36 1 -0.8829 -10.0037 -8.8765 37 1 -1.4566 -12.2059 -7.9390 38 1 -0.7603 -12.7936 -5.6526 39 1 0.4952 -11.1719 -4.2915 40 1 3.4589 -7.5747 -4.4980 41 1 3.3790 -6.2338 -5.7205 42 1 3.2371 -2.5092 -4.3800 43 1 2.9844 0.9978 -1.9664 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_12335870.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:55:20 Heat of formation + Delta-G solvation = -6.693360 kcal Electronic energy + Delta-G solvation = -27946.492876 eV Core-core repulsion = 23778.143062 eV Total energy + Delta-G solvation = -4168.349814 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.046 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -41.91781 -41.31656 -40.19223 -39.22037 -37.74768 -37.34274 -34.62988 -33.67197 -32.85035 -31.92160 -30.63670 -30.52870 -27.19416 -27.01592 -26.70910 -24.87170 -23.44101 -23.21510 -22.86243 -21.57752 -20.84554 -19.45213 -19.05269 -17.98325 -17.75879 -17.44277 -17.13762 -16.82812 -16.69484 -16.40517 -16.13412 -16.07694 -15.66010 -15.44647 -15.35439 -15.03633 -14.92420 -14.38494 -14.37304 -14.22570 -13.97488 -13.71910 -13.56084 -13.35102 -13.28798 -13.04990 -12.60121 -12.51002 -12.23123 -12.11848 -12.00951 -11.97093 -11.55201 -11.52795 -11.42659 -11.09524 -10.65151 -10.35433 -10.15769 -9.97635 -9.94229 -9.15107 -5.17135 -0.55842 -0.23093 0.34353 0.39828 0.50341 1.11590 1.48256 1.55117 1.84506 1.94680 2.01735 2.44684 2.84234 3.16233 3.20064 3.29071 3.30442 3.39567 3.60865 3.68806 3.77629 3.78667 3.87447 3.91085 3.95606 4.09792 4.16106 4.20324 4.27663 4.38464 4.41559 4.45608 4.50558 4.60328 4.65969 4.67035 4.73468 4.84474 4.87648 4.91748 5.03547 5.07198 5.28623 5.35454 5.38106 5.48086 5.61975 5.83331 6.29620 6.43509 6.44718 7.04098 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.067 4.067 3 Si 0.684 3.316 4 C -0.119 4.119 5 C -0.017 4.017 6 C -0.128 4.128 7 C 0.562 3.438 8 O -0.523 6.523 9 N -0.717 5.717 10 C 0.130 3.870 11 H 0.124 0.876 12 C -0.170 4.170 13 C 0.059 3.941 14 H 0.096 0.904 15 O -0.293 6.293 16 C 0.128 3.872 17 C -0.209 4.209 18 C -0.081 4.081 19 C -0.158 4.158 20 C -0.080 4.080 21 C -0.152 4.152 22 C -0.141 4.141 23 C -0.054 4.054 24 C -0.094 4.094 25 Br -0.032 7.032 26 C -0.064 4.064 27 H 0.381 0.619 28 H 0.121 0.879 29 H -0.248 1.248 30 H -0.253 1.253 31 H 0.149 0.851 32 H 0.401 0.599 33 H 0.099 0.901 34 H 0.084 0.916 35 H 0.129 0.871 36 H 0.125 0.875 37 H 0.124 0.876 38 H 0.130 0.870 39 H 0.131 0.869 40 H 0.091 0.909 41 H 0.105 0.895 42 H 0.138 0.862 43 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.364 2.210 -5.470 6.055 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.178 4.178 3 Si 0.585 3.415 4 C -0.120 4.120 5 C -0.036 4.036 6 C -0.132 4.132 7 C 0.349 3.651 8 O -0.400 6.400 9 N -0.368 5.368 10 C 0.025 3.975 11 H 0.142 0.858 12 C -0.209 4.209 13 C 0.001 3.999 14 H 0.114 0.886 15 O -0.206 6.206 16 C 0.083 3.917 17 C -0.227 4.227 18 C -0.099 4.099 19 C -0.176 4.176 20 C -0.098 4.098 21 C -0.170 4.170 22 C -0.179 4.179 23 C -0.075 4.075 24 C -0.174 4.174 25 Br 0.053 6.947 26 C -0.084 4.084 27 H 0.228 0.772 28 H 0.138 0.862 29 H -0.173 1.173 30 H -0.178 1.178 31 H 0.167 0.833 32 H 0.236 0.764 33 H 0.118 0.882 34 H 0.103 0.897 35 H 0.147 0.853 36 H 0.143 0.857 37 H 0.142 0.858 38 H 0.148 0.852 39 H 0.149 0.851 40 H 0.109 0.891 41 H 0.123 0.877 42 H 0.156 0.844 43 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 1.909 2.403 -4.164 5.173 hybrid contribution 0.164 -0.477 -0.233 0.556 sum 2.073 1.926 -4.397 5.229 Atomic orbital electron populations 1.86552 1.16539 1.81627 1.49276 1.25090 0.85670 1.10166 0.96891 0.94829 0.81228 0.77581 0.87832 1.20387 0.99211 0.94905 0.97527 1.21306 0.94397 0.92896 0.95041 1.19972 1.01735 0.94293 0.97187 1.18146 0.79726 0.85928 0.81286 1.90836 1.36953 1.66979 1.45188 1.45896 1.53584 1.12863 1.24469 1.22589 0.95220 0.80864 0.98796 0.85777 1.24030 1.00356 0.97457 0.99058 1.23120 0.96290 0.82955 0.97497 0.88604 1.86085 1.68758 1.27383 1.38402 1.19021 0.92769 0.89565 0.90307 1.21274 1.05149 1.01644 0.94658 1.20992 0.96167 0.93277 0.99431 1.21133 1.02781 0.97390 0.96284 1.21031 0.95948 0.98896 0.93950 1.20497 1.03343 0.91644 1.01528 1.23595 0.96473 0.98829 0.99000 1.21272 0.95198 0.92542 0.98448 1.21646 1.02933 0.95624 0.97180 1.96847 1.65803 1.75394 1.56634 1.21225 0.95308 0.99845 0.92007 0.77180 0.86160 1.17255 1.17786 0.83344 0.76356 0.88221 0.89688 0.85318 0.85696 0.85758 0.85196 0.85114 0.89074 0.87659 0.84402 0.84084 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.21 12.76 -35.23 -0.45 -0.24 16 2 C -0.07 0.07 2.82 36.01 0.10 0.17 16 3 Si 0.68 -1.27 29.78 -169.99 -5.06 -6.33 16 4 C -0.12 0.09 5.38 -104.68 -0.56 -0.48 16 5 C -0.02 -0.01 9.15 -39.18 -0.36 -0.37 16 6 C -0.13 -0.04 5.87 -104.97 -0.62 -0.65 16 7 C 0.56 1.01 7.77 -12.33 -0.10 0.92 16 8 O -0.52 -3.06 15.95 5.32 0.08 -2.98 16 9 N -0.72 0.84 5.31 -53.96 -0.29 0.56 16 10 C 0.13 -0.07 4.17 -67.12 -0.28 -0.35 16 11 H 0.12 0.27 7.46 -51.93 -0.39 -0.12 16 12 C -0.17 0.20 7.71 -25.92 -0.20 0.00 16 13 C 0.06 -0.06 3.75 -25.92 -0.10 -0.16 16 14 H 0.10 -0.23 5.96 -51.93 -0.31 -0.54 16 15 O -0.29 -0.55 10.06 -19.42 -0.20 -0.74 16 16 C 0.13 0.27 6.68 -39.21 -0.26 0.01 16 17 C -0.21 -0.19 9.01 -39.43 -0.36 -0.54 16 18 C -0.08 -0.05 10.04 -39.61 -0.40 -0.44 16 19 C -0.16 -0.10 10.04 -39.56 -0.40 -0.50 16 20 C -0.08 -0.07 10.04 -39.60 -0.40 -0.47 16 21 C -0.15 -0.28 9.99 -39.43 -0.39 -0.67 16 22 C -0.14 0.34 7.66 -25.92 -0.20 0.14 16 23 C -0.05 0.08 9.28 -39.16 -0.36 -0.28 16 24 C -0.09 0.10 6.22 -39.57 -0.25 -0.14 16 25 Br -0.03 0.04 33.69 -68.01 -2.29 -2.26 16 26 C -0.06 0.08 8.41 -39.47 -0.33 -0.25 16 27 H 0.38 -1.65 8.70 45.56 0.40 -1.25 16 28 H 0.12 -0.08 7.96 -51.93 -0.41 -0.49 16 29 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 30 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 31 H 0.15 0.27 7.65 -52.49 -0.40 -0.13 16 32 H 0.40 -1.64 6.76 -40.82 -0.28 -1.91 16 33 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 34 H 0.08 0.06 8.14 -51.93 -0.42 -0.37 16 35 H 0.13 -0.13 5.92 -52.49 -0.31 -0.44 16 36 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 37 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 38 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 39 H 0.13 0.12 8.06 -52.49 -0.42 -0.30 16 40 H 0.09 -0.15 8.14 -51.93 -0.42 -0.58 16 41 H 0.11 -0.50 8.12 -51.93 -0.42 -0.92 16 42 H 0.14 -0.55 6.40 -52.49 -0.34 -0.89 16 43 H 0.14 -0.38 4.86 -52.49 -0.26 -0.64 16 LS Contribution 382.23 15.07 5.76 5.76 Total: 0.00 -8.19 382.23 -12.77 -20.95 By element: Atomic # 1 Polarization: -5.77 SS G_CDS: -4.87 Total: -10.65 kcal Atomic # 6 Polarization: 1.38 SS G_CDS: -5.45 Total: -4.08 kcal Atomic # 7 Polarization: 0.84 SS G_CDS: -0.29 Total: 0.56 kcal Atomic # 8 Polarization: -3.40 SS G_CDS: -0.56 Total: -3.96 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: -5.06 Total: -6.33 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -2.29 Total: -2.26 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -8.19 -12.77 -20.95 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_12335870.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.260 kcal (2) G-P(sol) polarization free energy of solvation -8.187 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 6.073 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.767 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.953 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.693 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds