Wall clock time and date at job start Sat Mar 6 2021 18:55:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86304 * 109.47054 * 2 1 4 4 C 1.50707 * 109.46823 * 240.00275 * 2 1 3 5 5 C 1.37941 * 119.91943 * 299.99814 * 4 2 1 6 6 C 1.39597 * 119.86964 * 180.02562 * 5 4 2 7 7 C 1.47855 * 120.13467 * 179.97438 * 6 5 4 8 8 O 1.21549 * 120.00378 * 359.97438 * 7 6 5 9 9 N 1.34776 * 119.99472 * 180.02562 * 7 6 5 10 10 C 1.46500 * 119.99920 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.84596 * 336.19474 * 10 9 7 12 12 C 1.53781 * 113.69255 * 107.45923 * 10 9 7 13 13 C 1.53782 * 87.08169 * 139.99585 * 12 10 9 14 14 H 1.09004 * 113.68639 * 220.01056 * 13 12 10 15 15 O 1.42896 * 113.61845 * 89.11663 * 13 12 10 16 16 C 1.35900 * 117.00374 * 105.83219 * 15 13 12 17 17 C 1.38736 * 120.05206 * 354.29846 * 16 15 13 18 18 C 1.38143 * 119.94187 * 179.97438 * 17 16 15 19 19 C 1.38260 * 120.05540 * 0.25206 * 18 17 16 20 20 C 1.38264 * 120.11546 * 359.49287 * 19 18 17 21 21 C 1.38149 * 120.05337 * 0.50794 * 20 19 18 22 22 C 1.53776 * 113.61864 * 204.99631 * 10 9 7 23 23 C 1.39536 * 119.72461 * 0.25285 * 6 5 4 24 24 C 1.38080 * 119.84228 * 359.45073 * 23 6 5 25 25 Br 1.89096 * 119.94207 * 180.29790 * 24 23 6 26 26 C 1.38358 * 119.92195 * 119.97796 * 4 2 1 27 27 H 0.96704 * 113.99976 * 59.99896 * 1 2 3 28 28 H 1.08997 * 109.47135 * 120.00079 * 2 1 3 29 29 H 1.48492 * 109.99951 * 60.00421 * 3 2 1 30 30 H 1.48502 * 109.99943 * 181.32285 * 3 2 1 31 31 H 1.07997 * 120.06336 * 0.02562 * 5 4 2 32 32 H 0.97000 * 120.00698 * 359.97438 * 9 7 6 33 33 H 1.08996 * 113.61458 * 25.44441 * 12 10 9 34 34 H 1.09004 * 113.61521 * 254.54488 * 12 10 9 35 35 H 1.08001 * 120.02622 * 359.95725 * 17 16 15 36 36 H 1.07999 * 119.96681 * 179.97438 * 18 17 16 37 37 H 1.08002 * 119.94288 * 179.72559 * 19 18 17 38 38 H 1.08001 * 119.97872 * 180.25150 * 20 19 18 39 39 H 1.07992 * 120.03166 * 179.72043 * 21 20 19 40 40 H 1.09000 * 113.61509 * 105.37998 * 22 10 9 41 41 H 1.09005 * 113.68844 * 334.49509 * 22 10 9 42 42 H 1.08001 * 120.08127 * 179.74781 * 23 6 5 43 43 H 1.07998 * 119.85983 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 1.5970 -2.0310 -1.4472 6 6 2.0633 -2.6882 -2.5872 7 6 1.7091 -4.1039 -2.8250 8 8 1.0109 -4.6980 -2.0268 9 7 2.1612 -4.7357 -3.9262 10 6 1.8098 -6.1383 -4.1622 11 1 1.5559 -6.6709 -3.2457 12 6 0.7875 -6.3372 -5.2936 13 6 1.6116 -7.5651 -5.7158 14 1 1.7129 -7.6742 -6.7957 15 8 1.2078 -8.7748 -5.0713 16 6 0.5140 -9.6714 -5.8207 17 6 0.1251 -9.3445 -7.1117 18 6 -0.5796 -10.2579 -7.8716 19 6 -0.9018 -11.4949 -7.3448 20 6 -0.5109 -11.8251 -6.0604 21 6 0.1940 -10.9153 -5.2963 22 6 2.8194 -6.8855 -5.0494 23 6 2.8698 -2.0052 -3.4983 24 6 3.1922 -0.6816 -3.2730 25 35 4.2781 0.2490 -4.5101 26 6 2.7262 -0.0363 -2.1405 27 1 -0.3933 0.4417 -0.7651 28 1 1.7923 -0.5138 0.8899 29 1 1.5616 2.4678 1.2085 30 1 3.5346 1.7703 -0.0322 31 1 0.9758 -2.5555 -0.7364 32 1 2.7187 -4.2618 -4.5630 33 1 0.7907 -5.5346 -6.0311 34 1 -0.2134 -6.5839 -4.9394 35 1 0.3728 -8.3767 -7.5220 36 1 -0.8829 -10.0037 -8.8765 37 1 -1.4566 -12.2059 -7.9390 38 1 -0.7603 -12.7936 -5.6526 39 1 0.4952 -11.1719 -4.2915 40 1 3.4589 -7.5747 -4.4980 41 1 3.3790 -6.2338 -5.7205 42 1 3.2371 -2.5092 -4.3800 43 1 2.9844 0.9978 -1.9664 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11987230_12335870.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:55:19 Heat of formation + Delta-G solvation = -3.700430 kcal Electronic energy + Delta-G solvation = -27946.363093 eV Core-core repulsion = 23778.143062 eV Total energy + Delta-G solvation = -4168.220031 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 404.046 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.92854 -41.31972 -40.20230 -39.26031 -37.70297 -37.38804 -34.69374 -33.61935 -32.80841 -31.93862 -30.66074 -30.45842 -27.15354 -26.90144 -26.68333 -24.86323 -23.46782 -23.21898 -22.81910 -21.63331 -20.80173 -19.44405 -19.03199 -17.94463 -17.77818 -17.39076 -17.11753 -16.80432 -16.69725 -16.39893 -16.16341 -16.12652 -15.67559 -15.42462 -15.37950 -14.99979 -14.96262 -14.38215 -14.36121 -14.17520 -13.97664 -13.63208 -13.51486 -13.29827 -13.20581 -13.04882 -12.60395 -12.49546 -12.21179 -12.09778 -11.97121 -11.95627 -11.52206 -11.47608 -11.37201 -11.19032 -10.60907 -10.36900 -10.12176 -9.97797 -9.91843 -9.19538 -5.06282 -0.53864 -0.17446 0.36554 0.42397 0.45499 1.20197 1.47926 1.58392 1.88994 1.96325 2.07542 2.43771 2.80833 3.25359 3.27074 3.36175 3.39922 3.52668 3.68131 3.78195 3.85116 3.85997 3.90003 3.95057 3.99870 4.15001 4.20096 4.27289 4.31112 4.46106 4.47518 4.52543 4.60232 4.65110 4.71022 4.74347 4.80919 4.90688 4.91931 4.94465 5.06056 5.08443 5.31125 5.34178 5.39265 5.46551 5.59141 5.84783 6.33556 6.44361 6.70050 7.00860 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.077 4.077 3 Si 0.774 3.226 4 C -0.116 4.116 5 C -0.031 4.031 6 C -0.136 4.136 7 C 0.559 3.441 8 O -0.576 6.576 9 N -0.697 5.697 10 C 0.121 3.879 11 H 0.088 0.912 12 C -0.163 4.163 13 C 0.052 3.948 14 H 0.116 0.884 15 O -0.314 6.314 16 C 0.111 3.889 17 C -0.214 4.214 18 C -0.087 4.087 19 C -0.167 4.167 20 C -0.088 4.088 21 C -0.175 4.175 22 C -0.125 4.125 23 C -0.042 4.042 24 C -0.098 4.098 25 Br -0.026 7.026 26 C -0.061 4.061 27 H 0.397 0.603 28 H 0.112 0.888 29 H -0.294 1.294 30 H -0.275 1.275 31 H 0.128 0.872 32 H 0.418 0.582 33 H 0.125 0.875 34 H 0.060 0.940 35 H 0.148 0.852 36 H 0.146 0.854 37 H 0.142 0.858 38 H 0.145 0.855 39 H 0.128 0.872 40 H 0.083 0.917 41 H 0.141 0.859 42 H 0.166 0.834 43 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.395 3.300 -8.044 9.019 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.186 4.186 3 Si 0.679 3.321 4 C -0.117 4.117 5 C -0.051 4.051 6 C -0.140 4.140 7 C 0.347 3.653 8 O -0.456 6.456 9 N -0.349 5.349 10 C 0.016 3.984 11 H 0.106 0.894 12 C -0.202 4.202 13 C -0.005 4.005 14 H 0.134 0.866 15 O -0.228 6.228 16 C 0.066 3.934 17 C -0.233 4.233 18 C -0.105 4.105 19 C -0.185 4.185 20 C -0.106 4.106 21 C -0.193 4.193 22 C -0.163 4.163 23 C -0.062 4.062 24 C -0.178 4.178 25 Br 0.060 6.940 26 C -0.080 4.080 27 H 0.247 0.753 28 H 0.129 0.871 29 H -0.222 1.222 30 H -0.202 1.202 31 H 0.146 0.854 32 H 0.257 0.743 33 H 0.143 0.857 34 H 0.079 0.921 35 H 0.165 0.835 36 H 0.164 0.836 37 H 0.159 0.841 38 H 0.163 0.837 39 H 0.146 0.854 40 H 0.102 0.898 41 H 0.159 0.841 42 H 0.183 0.817 43 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 2.954 3.484 -6.802 8.193 hybrid contribution -0.168 -0.810 0.596 1.020 sum 2.786 2.674 -6.205 7.309 Atomic orbital electron populations 1.86513 1.16920 1.82164 1.50546 1.25282 0.85585 1.11195 0.96552 0.93826 0.78288 0.74569 0.85441 1.20330 0.99361 0.94276 0.97770 1.21245 0.94942 0.93638 0.95263 1.19852 1.02800 0.93562 0.97760 1.18445 0.79090 0.86468 0.81298 1.90811 1.39527 1.68176 1.47097 1.45750 1.52788 1.12560 1.23820 1.22508 0.96971 0.80991 0.97938 0.89354 1.24027 0.98734 0.98322 0.99067 1.23343 0.96707 0.81918 0.98514 0.86645 1.86065 1.68915 1.28359 1.39483 1.19249 0.93318 0.89788 0.91029 1.21519 1.04976 1.02589 0.94182 1.21332 0.95701 0.93135 1.00357 1.21440 1.02779 0.97983 0.96332 1.21285 0.95641 0.99409 0.94232 1.20699 1.04354 0.92382 1.01887 1.23619 0.95680 0.98401 0.98571 1.21470 0.93867 0.92370 0.98537 1.21745 1.02935 0.95812 0.97294 1.96866 1.65582 1.75267 1.56301 1.21389 0.94521 1.00481 0.91630 0.75280 0.87087 1.22170 1.20166 0.85444 0.74275 0.85654 0.92119 0.83491 0.83621 0.84059 0.83690 0.85384 0.89844 0.84146 0.81688 0.82573 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.11 12.76 -148.98 -1.90 -2.01 16 2 C -0.08 0.09 2.82 71.24 0.20 0.29 16 3 Si 0.77 -2.87 29.78 68.60 2.04 -0.83 16 4 C -0.12 0.11 5.38 -19.90 -0.11 0.00 16 5 C -0.03 -0.09 9.15 22.53 0.21 0.11 16 6 C -0.14 -0.16 5.87 -20.09 -0.12 -0.28 16 7 C 0.56 2.80 7.77 86.79 0.67 3.47 16 8 O -0.58 -8.59 15.95 -3.87 -0.06 -8.65 16 9 N -0.70 1.66 5.31 -442.91 -2.35 -0.69 16 10 C 0.12 -0.02 4.17 45.52 0.19 0.17 16 11 H 0.09 0.67 7.46 -2.39 -0.02 0.65 16 12 C -0.16 0.36 7.71 31.12 0.24 0.60 16 13 C 0.05 -0.12 3.75 31.12 0.12 -0.01 16 14 H 0.12 -0.74 5.96 -2.38 -0.01 -0.76 16 15 O -0.31 -1.63 10.06 -92.42 -0.93 -2.56 16 16 C 0.11 0.60 6.68 22.51 0.15 0.75 16 17 C -0.21 -0.36 9.01 22.37 0.20 -0.15 16 18 C -0.09 -0.05 10.04 22.25 0.22 0.18 16 19 C -0.17 -0.18 10.04 22.28 0.22 0.04 16 20 C -0.09 -0.22 10.04 22.25 0.22 0.01 16 21 C -0.17 -0.94 9.99 22.37 0.22 -0.72 16 22 C -0.12 0.70 7.66 31.12 0.24 0.94 16 23 C -0.04 0.18 9.28 22.55 0.21 0.39 16 24 C -0.10 0.34 6.22 22.28 0.14 0.48 16 25 Br -0.03 0.10 33.69 -20.37 -0.69 -0.58 16 26 C -0.06 0.21 8.41 22.34 0.19 0.39 16 27 H 0.40 -3.30 8.70 -74.05 -0.64 -3.95 16 28 H 0.11 0.03 7.96 -2.39 -0.02 0.01 16 29 H -0.29 -1.18 7.11 99.48 0.71 -0.47 16 30 H -0.28 0.00 7.11 99.48 0.71 0.70 16 31 H 0.13 0.89 7.65 -2.91 -0.02 0.87 16 32 H 0.42 -4.17 6.76 -92.71 -0.63 -4.80 16 33 H 0.13 -0.94 8.14 -2.39 -0.02 -0.96 16 34 H 0.06 0.19 8.14 -2.38 -0.02 0.17 16 35 H 0.15 -0.47 5.92 -2.91 -0.02 -0.48 16 36 H 0.15 -0.63 8.06 -2.91 -0.02 -0.65 16 37 H 0.14 -0.43 8.06 -2.91 -0.02 -0.45 16 38 H 0.15 -0.26 8.06 -2.91 -0.02 -0.29 16 39 H 0.13 0.58 8.06 -2.91 -0.02 0.55 16 40 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 41 H 0.14 -1.77 8.12 -2.38 -0.02 -1.79 16 42 H 0.17 -1.74 6.40 -2.91 -0.02 -1.76 16 43 H 0.16 -1.07 4.86 -2.91 -0.01 -1.08 16 Total: 0.00 -22.82 382.23 -0.62 -23.44 By element: Atomic # 1 Polarization: -14.63 SS G_CDS: -0.15 Total: -14.78 kcal Atomic # 6 Polarization: 3.24 SS G_CDS: 3.42 Total: 6.66 kcal Atomic # 7 Polarization: 1.66 SS G_CDS: -2.35 Total: -0.69 kcal Atomic # 8 Polarization: -10.33 SS G_CDS: -2.89 Total: -13.23 kcal Atomic # 14 Polarization: -2.87 SS G_CDS: 2.04 Total: -0.83 kcal Atomic # 35 Polarization: 0.10 SS G_CDS: -0.69 Total: -0.58 kcal Total: -22.82 -0.62 -23.44 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_12335870.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.740 kcal (2) G-P(sol) polarization free energy of solvation -22.822 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.083 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.618 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.440 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.700 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds