Wall clock time and date at job start Sat Mar 6 2021 18:55:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86296 * 109.47109 * 2 1 4 4 C 1.50697 * 109.46989 * 120.00297 * 2 1 3 5 5 C 1.34840 * 125.65346 * 64.99768 * 4 2 1 6 6 C 1.40803 * 107.04709 * 180.02562 * 5 4 2 7 7 C 1.36104 * 106.73476 * 359.97438 * 6 5 4 8 8 C 1.47573 * 125.94253 * 179.97438 * 7 6 5 9 9 C 1.39569 * 119.95206 * 179.97438 * 8 7 6 10 10 C 1.38322 * 119.80817 * 179.74380 * 9 8 7 11 11 O 1.35678 * 120.13256 * 180.30074 * 10 9 8 12 12 C 1.40361 * 119.72659 * 0.55448 * 10 9 8 13 13 C 1.47292 * 120.04915 * 179.71905 * 12 10 9 14 14 O 1.21627 * 119.99832 * 359.72856 * 13 12 10 15 15 N 1.34773 * 120.00488 * 179.72746 * 13 12 10 16 16 C 1.46503 * 120.00369 * 179.97438 * 15 13 12 17 17 H 1.08999 * 112.84765 * 23.80494 * 16 15 13 18 18 C 1.53782 * 113.61454 * 154.99674 * 16 15 13 19 19 C 1.53788 * 87.07843 * 89.11988 * 18 16 15 20 20 H 1.09003 * 113.60993 * 270.80176 * 19 18 16 21 21 O 1.42894 * 113.61573 * 139.98202 * 19 18 16 22 22 C 1.35902 * 117.00327 * 157.86952 * 21 19 18 23 23 C 1.38735 * 120.04993 * 5.94876 * 22 21 19 24 24 C 1.38142 * 119.93955 * 180.29790 * 23 22 21 25 25 C 1.38268 * 120.05725 * 359.42559 * 24 23 22 26 26 C 1.38272 * 120.10950 * 0.59611 * 25 24 23 27 27 C 1.38144 * 120.05260 * 359.68250 * 26 25 24 28 28 C 1.53776 * 113.61303 * 252.49715 * 16 15 13 29 29 C 1.39916 * 119.90619 * 359.44567 * 12 10 9 30 30 C 1.36382 * 120.18614 * 0.27660 * 29 12 10 31 31 O 1.34239 * 125.65408 * 245.32592 * 4 2 1 32 32 H 0.96703 * 114.00322 * 299.99923 * 1 2 3 33 33 H 1.08996 * 109.47026 * 239.99981 * 2 1 3 34 34 H 1.48493 * 110.00303 * 299.99914 * 3 2 1 35 35 H 1.48502 * 109.99948 * 61.32167 * 3 2 1 36 36 H 1.07996 * 126.47942 * 0.05966 * 5 4 2 37 37 H 1.07999 * 126.63114 * 179.97438 * 6 5 4 38 38 H 1.07999 * 120.09714 * 0.05013 * 9 8 7 39 39 H 0.96701 * 114.00021 * 270.25380 * 11 10 9 40 40 H 0.97002 * 119.99548 * 359.97438 * 15 13 12 41 41 H 1.08994 * 113.61459 * 334.56998 * 18 16 15 42 42 H 1.08993 * 113.61020 * 203.66275 * 18 16 15 43 43 H 1.07995 * 120.02805 * 0.02562 * 23 22 21 44 44 H 1.07998 * 119.97399 * 179.70121 * 24 23 22 45 45 H 1.07998 * 119.94755 * 180.30103 * 25 24 23 46 46 H 1.07994 * 119.97287 * 179.70501 * 26 25 24 47 47 H 1.08001 * 120.02510 * 179.97438 * 27 26 25 48 48 H 1.09000 * 113.61215 * 156.33375 * 28 16 15 49 49 H 1.09000 * 113.61821 * 25.43582 * 28 16 15 50 50 H 1.08005 * 119.90642 * 180.25402 * 29 12 10 51 51 H 1.08006 * 119.85859 * 179.97438 * 30 29 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.7566 -2.0181 1.5093 6 6 2.3799 -2.2628 2.7479 7 6 2.9074 -1.0785 3.1620 8 6 3.6557 -0.8541 4.4140 9 6 4.1438 0.4182 4.7155 10 6 4.8402 0.6264 5.8924 11 8 5.3123 1.8619 6.1950 12 6 5.0610 -0.4468 6.7696 13 6 5.8070 -0.2345 8.0217 14 8 6.2365 0.8704 8.2938 15 7 6.0138 -1.2645 8.8660 16 6 6.7563 -1.0534 10.1112 17 1 6.7306 -0.0173 10.4488 18 6 6.4122 -2.0691 11.2133 19 6 7.5284 -2.9554 10.6356 20 1 7.1867 -3.6334 9.8536 21 8 8.3138 -3.6102 11.6338 22 6 8.9857 -4.7289 11.2544 23 6 8.9916 -5.1178 9.9227 24 6 9.6703 -6.2587 9.5406 25 6 10.3532 -7.0064 10.4822 26 6 10.3485 -6.6211 11.8102 27 6 9.6665 -5.4841 12.1982 28 6 8.1675 -1.6642 10.0979 29 6 4.5665 -1.7175 6.4557 30 6 3.8754 -1.9174 5.2970 31 8 2.6214 -0.1451 2.2335 32 1 -0.3934 0.4417 0.7651 33 1 1.7923 -0.5138 -0.8900 34 1 1.5615 2.4679 -1.2084 35 1 1.5879 2.4585 1.2243 36 1 1.2374 -2.7412 0.8979 37 1 2.4298 -3.2077 3.2686 38 1 3.9739 1.2390 4.0344 39 1 6.2047 2.0337 5.8646 40 1 5.6709 -2.1456 8.6492 41 1 5.4164 -2.5008 11.1139 42 1 6.6193 -1.7073 12.2204 43 1 8.4625 -4.5315 9.1862 44 1 9.6713 -6.5646 8.5049 45 1 10.8872 -7.8953 10.1807 46 1 10.8786 -7.2093 12.5445 47 1 9.6627 -5.1838 13.2356 48 1 8.8543 -1.1917 10.8002 49 1 8.5886 -1.7689 9.0981 50 1 4.7329 -2.5425 7.1326 51 1 3.4964 -2.9005 5.0598 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_12807986.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:55:51 Heat of formation + Delta-G solvation = -29.859910 kcal Electronic energy + Delta-G solvation = -36632.639408 eV Core-core repulsion = 31625.522595 eV Total energy + Delta-G solvation = -5007.116813 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.150 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -43.79417 -41.96178 -41.28492 -40.15270 -39.03078 -38.23850 -37.90599 -37.41448 -34.59649 -34.18068 -33.12548 -31.95632 -31.38043 -30.75286 -30.46810 -27.33718 -26.99715 -26.16601 -24.58398 -24.16166 -23.56313 -23.03860 -22.52291 -22.15253 -21.44441 -20.64655 -19.76793 -19.53594 -18.81198 -18.62375 -17.74235 -17.56149 -17.43375 -17.24802 -16.80171 -16.67944 -16.58595 -16.31505 -16.13158 -15.93096 -15.87495 -15.64569 -15.38219 -15.04744 -14.91080 -14.48869 -14.40916 -14.32096 -14.07130 -14.03375 -13.83316 -13.77397 -13.68170 -13.60022 -13.49655 -13.19477 -12.99301 -12.81803 -12.66880 -12.51016 -12.09228 -11.99767 -11.88980 -11.61332 -11.43437 -11.19612 -10.89068 -10.88564 -10.68672 -10.23220 -10.03904 -9.97110 -9.15777 -9.08593 -5.04291 -0.86207 0.03590 0.37067 0.48514 0.59105 1.06170 1.36852 1.40372 1.66025 1.87271 1.88033 1.89736 2.17406 2.55419 2.82237 2.94111 3.09764 3.19730 3.27047 3.27978 3.44473 3.52048 3.58353 3.63709 3.78512 3.83099 3.87460 3.88335 3.93427 4.07647 4.16033 4.24846 4.25605 4.30991 4.43101 4.47770 4.49637 4.55443 4.59656 4.61533 4.64223 4.69484 4.72890 4.76999 4.79044 4.85723 4.91967 5.01410 5.04017 5.10144 5.31544 5.32235 5.37745 5.40387 5.45351 5.59449 5.81357 5.89297 6.17529 6.30271 6.45427 6.62858 7.10538 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.035 4.035 3 Si 0.697 3.303 4 C -0.043 4.043 5 C -0.173 4.173 6 C -0.176 4.176 7 C 0.022 3.978 8 C 0.032 3.968 9 C -0.141 4.141 10 C 0.181 3.819 11 O -0.474 6.474 12 C -0.166 4.166 13 C 0.563 3.437 14 O -0.512 6.512 15 N -0.715 5.715 16 C 0.124 3.876 17 H 0.118 0.882 18 C -0.136 4.136 19 C 0.054 3.946 20 H 0.099 0.901 21 O -0.300 6.300 22 C 0.129 3.871 23 C -0.210 4.210 24 C -0.080 4.080 25 C -0.159 4.159 26 C -0.080 4.080 27 C -0.154 4.154 28 C -0.165 4.165 29 C -0.064 4.064 30 C -0.116 4.116 31 O -0.162 6.162 32 H 0.381 0.619 33 H 0.139 0.861 34 H -0.247 1.247 35 H -0.255 1.255 36 H 0.156 0.844 37 H 0.156 0.844 38 H 0.144 0.856 39 H 0.400 0.600 40 H 0.399 0.601 41 H 0.085 0.915 42 H 0.111 0.889 43 H 0.126 0.874 44 H 0.124 0.876 45 H 0.124 0.876 46 H 0.130 0.870 47 H 0.131 0.869 48 H 0.105 0.895 49 H 0.078 0.922 50 H 0.135 0.865 51 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.388 -4.832 -1.904 5.376 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.144 4.144 3 Si 0.596 3.404 4 C -0.093 4.093 5 C -0.192 4.192 6 C -0.195 4.195 7 C -0.028 4.028 8 C 0.031 3.969 9 C -0.159 4.159 10 C 0.134 3.866 11 O -0.286 6.286 12 C -0.170 4.170 13 C 0.351 3.649 14 O -0.387 6.387 15 N -0.368 5.368 16 C 0.019 3.981 17 H 0.136 0.864 18 C -0.174 4.174 19 C -0.002 4.002 20 H 0.116 0.884 21 O -0.213 6.213 22 C 0.084 3.916 23 C -0.229 4.229 24 C -0.098 4.098 25 C -0.177 4.177 26 C -0.098 4.098 27 C -0.172 4.172 28 C -0.204 4.204 29 C -0.083 4.083 30 C -0.134 4.134 31 O -0.059 6.059 32 H 0.229 0.771 33 H 0.156 0.844 34 H -0.171 1.171 35 H -0.179 1.179 36 H 0.174 0.826 37 H 0.174 0.826 38 H 0.162 0.838 39 H 0.259 0.741 40 H 0.234 0.766 41 H 0.103 0.897 42 H 0.130 0.870 43 H 0.144 0.856 44 H 0.142 0.858 45 H 0.142 0.858 46 H 0.148 0.852 47 H 0.148 0.852 48 H 0.124 0.876 49 H 0.097 0.903 50 H 0.153 0.847 51 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 1.107 -2.983 -1.773 3.642 hybrid contribution -0.887 -1.117 -0.015 1.426 sum 0.221 -4.100 -1.788 4.478 Atomic orbital electron populations 1.86667 1.16622 1.80143 1.49272 1.24361 0.84033 1.12200 0.93822 0.94489 0.91409 0.73316 0.81153 1.22954 1.00612 0.93782 0.91948 1.21590 1.03940 0.95722 0.97965 1.21916 1.01864 0.98399 0.97365 1.20314 1.03837 0.87474 0.91128 1.17761 0.95387 0.93732 0.89973 1.21606 1.00291 0.97109 0.96901 1.18280 0.93793 0.84069 0.90471 1.84779 1.36543 1.27448 1.79782 1.20439 1.04828 0.94379 0.97367 1.17965 0.79472 0.84340 0.83149 1.90860 1.49602 1.23360 1.74908 1.45614 1.57520 1.12333 1.21285 1.21599 0.91447 1.01136 0.83932 0.86432 1.23601 0.98230 0.95306 1.00252 1.24237 0.92440 0.92362 0.91191 0.88384 1.86171 1.59331 1.37375 1.38456 1.19039 0.93040 0.86688 0.92870 1.21243 1.06032 1.00610 0.95006 1.20985 0.95365 0.93791 0.99682 1.21127 1.02024 1.01202 0.93349 1.21036 0.97119 0.95304 0.96320 1.20509 1.01286 0.96115 0.99311 1.24029 0.97660 0.95888 1.02833 1.20795 0.95603 0.95443 0.96464 1.20699 1.00214 0.98782 0.93717 1.83952 1.57797 1.37713 1.26403 0.77067 0.84391 1.17147 1.17881 0.82647 0.82611 0.83780 0.74147 0.76562 0.89674 0.87040 0.85599 0.85756 0.85780 0.85234 0.85152 0.87632 0.90300 0.84714 0.84314 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.13 12.88 -35.23 -0.45 -0.58 16 2 C -0.03 0.03 2.98 36.00 0.11 0.14 16 3 Si 0.70 -0.76 32.11 -169.99 -5.46 -6.22 16 4 C -0.04 -0.01 6.20 -35.52 -0.22 -0.23 16 5 C -0.17 0.00 10.78 -39.82 -0.43 -0.43 16 6 C -0.18 0.07 10.26 -39.38 -0.40 -0.33 16 7 C 0.02 0.01 7.02 -36.54 -0.26 -0.25 16 8 C 0.03 -0.01 5.87 -104.95 -0.62 -0.62 16 9 C -0.14 -0.06 9.65 -39.05 -0.38 -0.44 16 10 C 0.18 0.22 6.71 -38.75 -0.26 -0.04 16 11 O -0.47 -0.95 11.56 -40.70 -0.47 -1.42 16 12 C -0.17 -0.05 5.89 -104.79 -0.62 -0.66 16 13 C 0.56 0.85 7.75 -12.58 -0.10 0.75 16 14 O -0.51 -2.66 14.74 -16.70 -0.25 -2.91 16 15 N -0.71 1.09 5.21 -54.13 -0.28 0.80 16 16 C 0.12 -0.14 4.32 -67.12 -0.29 -0.43 16 17 H 0.12 0.06 7.46 -51.93 -0.39 -0.33 16 18 C -0.14 0.30 7.66 -25.91 -0.20 0.10 16 19 C 0.05 -0.07 3.51 -25.92 -0.09 -0.16 16 20 H 0.10 -0.27 6.04 -51.93 -0.31 -0.59 16 21 O -0.30 -0.42 10.15 -19.43 -0.20 -0.62 16 22 C 0.13 0.21 6.68 -39.22 -0.26 -0.05 16 23 C -0.21 -0.10 9.01 -39.43 -0.36 -0.46 16 24 C -0.08 -0.01 10.04 -39.61 -0.40 -0.41 16 25 C -0.16 -0.04 10.04 -39.56 -0.40 -0.44 16 26 C -0.08 -0.04 10.04 -39.60 -0.40 -0.43 16 27 C -0.15 -0.21 9.99 -39.44 -0.39 -0.61 16 28 C -0.17 0.18 7.71 -25.92 -0.20 -0.02 16 29 C -0.06 0.15 9.47 -39.62 -0.38 -0.22 16 30 C -0.12 0.24 9.48 -39.61 -0.38 -0.13 16 31 O -0.16 -0.16 8.79 4.71 0.04 -0.12 16 32 H 0.38 -0.89 8.70 45.56 0.40 -0.50 16 33 H 0.14 -0.35 7.96 -51.93 -0.41 -0.77 16 34 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 35 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 36 H 0.16 -0.18 8.06 -52.49 -0.42 -0.60 16 37 H 0.16 -0.44 7.24 -52.49 -0.38 -0.82 16 38 H 0.14 -0.02 7.89 -52.49 -0.41 -0.43 16 39 H 0.40 -0.73 9.06 45.56 0.41 -0.32 16 40 H 0.40 -1.70 6.71 -40.82 -0.27 -1.97 16 41 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 42 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 43 H 0.13 -0.18 5.95 -52.49 -0.31 -0.49 16 44 H 0.12 -0.23 8.06 -52.49 -0.42 -0.65 16 45 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 46 H 0.13 -0.20 8.06 -52.49 -0.42 -0.62 16 47 H 0.13 0.06 8.06 -52.49 -0.42 -0.37 16 48 H 0.11 -0.07 8.14 -51.93 -0.42 -0.49 16 49 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 50 H 0.14 -0.74 6.38 -52.48 -0.33 -1.08 16 51 H 0.14 -0.60 6.96 -52.48 -0.37 -0.97 16 LS Contribution 433.93 15.07 6.54 6.54 Total: 0.00 -10.49 433.93 -12.82 -23.31 By element: Atomic # 1 Polarization: -8.02 SS G_CDS: -5.39 Total: -13.41 kcal Atomic # 6 Polarization: 1.53 SS G_CDS: -6.90 Total: -5.37 kcal Atomic # 7 Polarization: 1.09 SS G_CDS: -0.28 Total: 0.80 kcal Atomic # 8 Polarization: -4.32 SS G_CDS: -1.33 Total: -5.65 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.46 Total: -6.22 kcal Total LS contribution 6.54 Total: 6.54 kcal Total: -10.49 -12.82 -23.31 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_12807986.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.551 kcal (2) G-P(sol) polarization free energy of solvation -10.489 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.040 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.820 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.309 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.860 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds