Wall clock time and date at job start Sat Mar 6 2021 18:55:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.39288 * 121.02795 * 2 1 4 4 C 1.46505 * 134.20287 * 359.34325 * 3 2 1 5 5 C 1.50697 * 126.59926 * 0.71855 * 4 3 2 6 6 O 1.42893 * 109.46972 * 284.71648 * 5 4 3 7 7 Si 1.86292 * 109.47077 * 164.71341 * 5 4 3 8 8 C 1.34178 * 106.79933 * 180.46088 * 4 3 2 9 9 N 1.36941 * 109.95464 * 0.22244 * 8 4 3 10 10 C 1.37156 * 110.11725 * 0.02562 * 9 8 4 11 11 N 1.32816 * 132.96778 * 179.97438 * 10 9 8 12 12 C 1.31303 * 121.89642 * 179.97438 * 11 10 9 13 13 C 1.39748 * 121.03070 * 179.73591 * 2 1 3 14 14 C 1.47657 * 120.45412 * 0.02562 * 13 2 1 15 15 O 1.21574 * 119.99957 * 354.05986 * 14 13 2 16 16 N 1.34784 * 119.99935 * 174.06309 * 14 13 2 17 17 C 1.46498 * 119.99947 * 179.97438 * 16 14 13 18 18 H 1.08998 * 112.84901 * 334.66592 * 17 16 14 19 19 C 1.53783 * 113.61310 * 105.86350 * 17 16 14 20 20 C 1.54044 * 86.98392 * 89.16143 * 19 17 16 21 21 H 1.09000 * 113.69060 * 270.87252 * 20 19 17 22 22 O 1.42905 * 113.61834 * 139.97981 * 20 19 17 23 23 C 1.35901 * 117.00056 * 106.27709 * 22 20 19 24 24 C 1.38735 * 120.05381 * 174.32172 * 23 22 20 25 25 C 1.38139 * 119.93911 * 179.74530 * 24 23 22 26 26 C 1.38265 * 120.06132 * 0.50736 * 25 24 23 27 27 C 1.38264 * 120.10875 * 359.76523 * 26 25 24 28 28 C 1.38150 * 120.05471 * 359.97438 * 27 26 25 29 29 C 1.53781 * 113.61564 * 203.47168 * 17 16 14 30 30 H 1.08998 * 109.47214 * 263.78169 * 1 2 3 31 31 H 1.09006 * 109.47413 * 23.78592 * 1 2 3 32 32 H 1.09005 * 109.47043 * 143.78231 * 1 2 3 33 33 H 1.09008 * 109.46869 * 44.71298 * 5 4 3 34 34 H 0.96709 * 114.00104 * 179.97438 * 6 5 4 35 35 H 1.48505 * 110.00165 * 298.68191 * 7 5 4 36 36 H 1.48498 * 110.00174 * 60.00211 * 7 5 4 37 37 H 1.08002 * 125.02237 * 180.20591 * 8 4 3 38 38 H 0.97004 * 124.94392 * 180.02562 * 9 8 4 39 39 H 1.08005 * 119.31693 * 180.02562 * 12 11 10 40 40 H 0.96997 * 119.99822 * 359.97438 * 16 14 13 41 41 H 1.08999 * 113.60884 * 203.66446 * 19 17 16 42 42 H 1.09004 * 113.61548 * 334.56473 * 19 17 16 43 43 H 1.08000 * 120.02953 * 359.97438 * 24 23 22 44 44 H 1.08008 * 119.97154 * 180.23545 * 25 24 23 45 45 H 1.07995 * 119.94725 * 179.74545 * 26 25 24 46 46 H 1.07999 * 119.97184 * 179.97438 * 27 26 25 47 47 H 1.08004 * 120.02761 * 179.97438 * 28 27 26 48 48 H 1.09005 * 113.61304 * 25.42986 * 29 17 16 49 49 H 1.08997 * 113.61225 * 156.33560 * 29 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1936 0.0000 4 6 1.8515 2.6102 -0.0120 5 6 0.4526 3.1706 -0.0139 6 8 -0.1198 3.0182 -1.3143 7 14 0.5074 4.9784 0.4326 8 6 2.9948 3.3126 -0.0153 9 7 4.0668 2.4605 -0.0113 10 6 3.6347 1.1588 -0.0058 11 7 4.2719 -0.0065 -0.0011 12 6 3.6267 -1.1501 0.0043 13 6 2.2274 -1.1975 0.0055 14 6 1.5225 -2.4949 0.0109 15 8 0.3121 -2.5286 0.1196 16 7 2.2210 -3.6418 -0.1045 17 6 1.5217 -4.9291 -0.0986 18 1 0.5652 -4.8888 0.4226 19 6 1.4411 -5.5927 -1.4835 20 6 2.7879 -6.2624 -1.1510 21 1 3.6553 -5.6703 -1.4428 22 8 2.8734 -7.6220 -1.5830 23 6 3.6525 -7.8771 -2.6668 24 6 3.8756 -9.1859 -3.0695 25 6 4.6636 -9.4423 -4.1747 26 6 5.2384 -8.3966 -4.8732 27 6 5.0222 -7.0917 -4.4705 28 6 4.2305 -6.8297 -3.3691 29 6 2.4082 -6.1098 0.3314 30 1 -0.3633 -0.1113 1.0216 31 1 -0.3634 0.9404 -0.4145 32 1 -0.3633 -0.8291 -0.6072 33 1 -0.1546 2.6344 0.7155 34 1 -1.0222 3.3577 -1.3891 35 1 1.0714 5.1481 1.7959 36 1 1.3322 5.7206 -0.5543 37 1 3.0599 4.3906 -0.0206 38 1 4.9965 2.7373 -0.0122 39 1 4.1870 -2.0734 0.0084 40 1 3.1867 -3.6149 -0.1915 41 1 0.6156 -6.2976 -1.5824 42 1 1.4961 -4.8850 -2.3107 43 1 3.4305 -10.0033 -2.5216 44 1 4.8345 -10.4608 -4.4909 45 1 5.8575 -8.5994 -5.7345 46 1 5.4726 -6.2766 -5.0175 47 1 4.0622 -5.8102 -3.0547 48 1 3.2436 -5.8192 0.9684 49 1 1.8466 -6.9558 0.7276 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_12890568.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:55:55 Heat of formation + Delta-G solvation = 39.096983 kcal Electronic energy + Delta-G solvation = -33846.980851 eV Core-core repulsion = 29322.055317 eV Total energy + Delta-G solvation = -4524.925534 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.157 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -42.89133 -41.75498 -40.79018 -39.52795 -38.61085 -37.79554 -37.43286 -35.07469 -34.23457 -32.09057 -31.92268 -31.05386 -30.56442 -28.82441 -26.94827 -26.69360 -26.11217 -24.70819 -24.04111 -23.47281 -22.89189 -22.05025 -20.58877 -20.42549 -19.54439 -19.21593 -18.67800 -18.40977 -17.67786 -17.41910 -17.05070 -16.77156 -16.62842 -16.49438 -16.23441 -15.80602 -15.58621 -15.44250 -15.32146 -15.18145 -15.01173 -14.69918 -14.38629 -14.24110 -14.06500 -14.01519 -13.75367 -13.63096 -13.55761 -13.50898 -13.28418 -13.12440 -12.84364 -12.64296 -12.59728 -12.46250 -12.01097 -11.93222 -11.55942 -11.38325 -11.11063 -11.01391 -10.42358 -10.21588 -10.19547 -9.92846 -9.63801 -9.19120 -9.11087 -5.09536 -0.27933 -0.10126 0.41391 0.52848 1.19728 1.29218 1.54769 1.59162 1.84937 1.86674 1.95046 2.22346 2.79474 2.86482 3.18837 3.26702 3.32273 3.33975 3.48921 3.60925 3.64284 3.67003 3.71992 3.79421 3.92008 3.98291 4.01396 4.07530 4.20079 4.24294 4.30328 4.44142 4.47342 4.53394 4.60525 4.61843 4.65373 4.68485 4.72380 4.76276 4.83852 4.89589 4.92233 5.00945 5.08304 5.15481 5.33166 5.37841 5.42748 5.49682 5.53131 5.63583 5.72599 5.85613 6.04638 6.36535 6.49950 6.62296 6.80577 7.16425 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C 0.088 3.912 3 C -0.148 4.148 4 C -0.132 4.132 5 C -0.041 4.041 6 O -0.544 6.544 7 Si 0.687 3.313 8 C 0.064 3.936 9 N -0.569 5.569 10 C 0.309 3.691 11 N -0.502 5.502 12 C 0.181 3.819 13 C -0.235 4.235 14 C 0.577 3.423 15 O -0.524 6.524 16 N -0.715 5.715 17 C 0.126 3.874 18 H 0.118 0.882 19 C -0.165 4.165 20 C 0.053 3.947 21 H 0.100 0.900 22 O -0.300 6.300 23 C 0.129 3.871 24 C -0.154 4.154 25 C -0.080 4.080 26 C -0.159 4.159 27 C -0.080 4.080 28 C -0.211 4.211 29 C -0.136 4.136 30 H 0.082 0.918 31 H 0.081 0.919 32 H 0.099 0.901 33 H 0.076 0.924 34 H 0.381 0.619 35 H -0.254 1.254 36 H -0.251 1.251 37 H 0.178 0.822 38 H 0.426 0.574 39 H 0.162 0.838 40 H 0.399 0.601 41 H 0.105 0.895 42 H 0.079 0.921 43 H 0.130 0.870 44 H 0.130 0.870 45 H 0.124 0.876 46 H 0.124 0.876 47 H 0.127 0.873 48 H 0.085 0.915 49 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.154 3.070 0.687 3.150 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.187 4.187 2 C 0.080 3.920 3 C -0.155 4.155 4 C -0.139 4.139 5 C -0.152 4.152 6 O -0.350 6.350 7 Si 0.588 3.412 8 C -0.062 4.062 9 N -0.174 5.174 10 C 0.076 3.924 11 N -0.215 5.215 12 C 0.012 3.988 13 C -0.242 4.242 14 C 0.365 3.635 15 O -0.401 6.401 16 N -0.367 5.367 17 C 0.020 3.980 18 H 0.135 0.865 19 C -0.204 4.204 20 C -0.004 4.004 21 H 0.117 0.883 22 O -0.213 6.213 23 C 0.084 3.916 24 C -0.172 4.172 25 C -0.098 4.098 26 C -0.177 4.177 27 C -0.098 4.098 28 C -0.229 4.229 29 C -0.174 4.174 30 H 0.101 0.899 31 H 0.099 0.901 32 H 0.118 0.882 33 H 0.094 0.906 34 H 0.229 0.771 35 H -0.179 1.179 36 H -0.176 1.176 37 H 0.194 0.806 38 H 0.265 0.735 39 H 0.179 0.821 40 H 0.234 0.766 41 H 0.123 0.877 42 H 0.097 0.903 43 H 0.148 0.852 44 H 0.147 0.853 45 H 0.142 0.858 46 H 0.142 0.858 47 H 0.145 0.855 48 H 0.103 0.897 49 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 0.974 3.515 1.002 3.783 hybrid contribution 0.722 -0.166 -0.176 0.761 sum 1.696 3.349 0.826 3.844 Atomic orbital electron populations 1.21255 0.88742 1.04888 1.03858 1.19904 0.97248 0.89022 0.85837 1.19456 0.92804 0.93386 1.09839 1.19538 0.93195 0.90635 1.10540 1.24038 0.91388 1.10932 0.88834 1.86541 1.33799 1.85604 1.29066 0.94918 0.90423 0.76050 0.79856 1.21630 0.85351 0.95634 1.03580 1.41468 1.09517 1.02727 1.63712 1.18468 0.89302 0.85835 0.98761 1.66430 1.40506 0.95944 1.18651 1.22500 0.90087 0.94419 0.91801 1.20387 0.94727 0.93632 1.15495 1.17833 0.86816 0.83088 0.75716 1.90764 1.13437 1.86911 1.48968 1.45600 1.10435 1.05088 1.75578 1.21585 0.97574 0.81558 0.97256 0.86454 1.24069 0.98140 0.99869 0.98302 1.24319 0.98436 0.81662 0.95958 0.88281 1.86170 1.63588 1.28403 1.43158 1.19039 0.91174 0.93984 0.87411 1.20501 1.02939 0.94267 0.99523 1.21029 0.95318 0.99557 0.93905 1.21119 1.02469 0.92709 1.01439 1.20990 0.96403 0.97058 0.95351 1.21256 1.03739 0.98560 0.99361 1.23602 1.00576 0.98385 0.94838 0.89921 0.90057 0.88242 0.90624 0.77087 1.17882 1.17584 0.80556 0.73516 0.82102 0.76577 0.87670 0.90254 0.85160 0.85256 0.85808 0.85771 0.85536 0.89653 0.87064 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.32 8.46 36.00 0.30 -0.01 16 2 C 0.09 0.30 5.98 -103.67 -0.62 -0.32 16 3 C -0.15 -0.53 6.16 -105.12 -0.65 -1.17 16 4 C -0.13 -0.27 5.61 -102.72 -0.58 -0.85 16 5 C -0.04 0.02 1.87 36.00 0.07 0.09 16 6 O -0.54 0.17 11.64 -35.23 -0.41 -0.24 16 7 Si 0.69 -1.55 30.80 -169.99 -5.24 -6.79 16 8 C 0.06 0.05 10.44 -16.70 -0.17 -0.13 16 9 N -0.57 -0.48 6.04 -12.12 -0.07 -0.56 16 10 C 0.31 1.03 8.42 -155.71 -1.31 -0.28 16 11 N -0.50 -1.55 10.37 -11.96 -0.12 -1.68 16 12 C 0.18 0.20 10.67 -17.11 -0.18 0.02 16 13 C -0.24 -0.53 5.89 -104.82 -0.62 -1.14 16 14 C 0.58 1.18 7.72 -12.41 -0.10 1.09 16 15 O -0.52 -2.51 13.12 5.30 0.07 -2.44 16 16 N -0.71 0.69 5.22 -54.02 -0.28 0.41 16 17 C 0.13 -0.11 4.30 -67.12 -0.29 -0.40 16 18 H 0.12 0.04 7.50 -51.93 -0.39 -0.35 16 19 C -0.16 0.09 7.73 -25.78 -0.20 -0.11 16 20 C 0.05 -0.04 3.60 -25.78 -0.09 -0.13 16 21 H 0.10 -0.20 5.92 -51.93 -0.31 -0.50 16 22 O -0.30 -0.57 10.15 -19.43 -0.20 -0.77 16 23 C 0.13 0.29 6.68 -39.22 -0.26 0.03 16 24 C -0.15 -0.29 9.99 -39.43 -0.39 -0.69 16 25 C -0.08 -0.08 10.04 -39.61 -0.40 -0.48 16 26 C -0.16 -0.15 10.04 -39.56 -0.40 -0.54 16 27 C -0.08 -0.08 10.04 -39.60 -0.40 -0.47 16 28 C -0.21 -0.27 9.02 -39.43 -0.36 -0.63 16 29 C -0.14 0.26 7.65 -25.92 -0.20 0.07 16 30 H 0.08 0.17 8.14 -51.93 -0.42 -0.26 16 31 H 0.08 0.12 4.78 -51.93 -0.25 -0.12 16 32 H 0.10 0.37 5.97 -51.93 -0.31 0.06 16 33 H 0.08 -0.12 7.13 -51.92 -0.37 -0.49 16 34 H 0.38 -2.02 8.74 45.56 0.40 -1.62 16 35 H -0.25 -0.08 7.11 56.52 0.40 0.33 16 36 H -0.25 -0.04 7.04 56.52 0.40 0.36 16 37 H 0.18 -0.29 6.31 -52.49 -0.33 -0.62 16 38 H 0.43 -0.81 8.96 -40.82 -0.37 -1.18 16 39 H 0.16 -0.43 6.43 -52.48 -0.34 -0.77 16 40 H 0.40 -1.37 6.78 -40.82 -0.28 -1.64 16 41 H 0.10 -0.02 8.14 -51.93 -0.42 -0.45 16 42 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 43 H 0.13 0.11 8.06 -52.49 -0.42 -0.31 16 44 H 0.13 -0.14 8.06 -52.48 -0.42 -0.56 16 45 H 0.12 -0.10 8.06 -52.49 -0.42 -0.52 16 46 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 47 H 0.13 -0.06 5.90 -52.48 -0.31 -0.37 16 48 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 49 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 LS Contribution 399.13 15.07 6.01 6.01 Total: 0.00 -10.48 399.13 -12.93 -23.41 By element: Atomic # 1 Polarization: -5.45 SS G_CDS: -5.85 Total: -11.30 kcal Atomic # 6 Polarization: 0.76 SS G_CDS: -6.84 Total: -6.07 kcal Atomic # 7 Polarization: -1.34 SS G_CDS: -0.48 Total: -1.82 kcal Atomic # 8 Polarization: -2.91 SS G_CDS: -0.54 Total: -3.44 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -5.24 Total: -6.79 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -10.48 -12.93 -23.41 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_12890568.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.508 kcal (2) G-P(sol) polarization free energy of solvation -10.485 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.024 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.927 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.412 kcal (6) G-S(sol) free energy of system = (1) + (5) 39.097 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds