Wall clock time and date at job start Sat Mar 6 2021 18:56:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86305 * 109.46957 * 2 1 4 4 C 1.50704 * 109.47064 * 119.99573 * 2 1 3 5 5 C 1.34191 * 126.54041 * 255.02871 * 4 2 1 6 6 N 1.36867 * 109.96671 * 179.97438 * 5 4 2 7 7 C 1.37410 * 109.98093 * 359.74318 * 6 5 4 8 8 C 1.39321 * 133.24918 * 179.56245 * 7 6 5 9 9 C 1.36358 * 120.23764 * 180.40388 * 8 7 6 10 10 C 1.40163 * 120.66713 * 0.27969 * 9 8 7 11 11 C 1.47658 * 119.97581 * 179.97438 * 10 9 8 12 12 O 1.21574 * 119.99984 * 179.97438 * 11 10 9 13 13 N 1.34772 * 119.99290 * 0.02562 * 11 10 9 14 14 C 1.46505 * 119.99471 * 179.97438 * 13 11 10 15 15 H 1.09005 * 112.84922 * 25.33753 * 14 13 11 16 16 C 1.53788 * 113.61023 * 156.52616 * 14 13 11 17 17 C 1.53784 * 87.07649 * 139.98603 * 16 14 13 18 18 H 1.09002 * 113.61116 * 220.01801 * 17 16 14 19 19 O 1.42894 * 113.61870 * 89.19984 * 17 16 14 20 20 C 1.35904 * 117.00173 * 156.68154 * 19 17 16 21 21 C 1.38729 * 120.05658 * 5.43602 * 20 19 17 22 22 C 1.38144 * 119.94414 * 179.74389 * 21 20 19 23 23 C 1.38255 * 120.05561 * 0.50742 * 22 21 20 24 24 C 1.38270 * 120.11293 * 359.76785 * 23 22 21 25 25 C 1.38146 * 120.05298 * 359.97438 * 24 23 22 26 26 C 1.53781 * 113.61602 * 254.13225 * 14 13 11 27 27 C 1.39193 * 120.05508 * 359.97273 * 10 9 8 28 28 C 1.39233 * 119.39272 * 0.02562 * 27 10 9 29 29 H 0.96708 * 113.99794 * 59.99944 * 1 2 3 30 30 H 1.08997 * 109.47149 * 239.99734 * 2 1 3 31 31 H 1.48497 * 110.00091 * 60.00120 * 3 2 1 32 32 H 1.48498 * 109.99774 * 181.31607 * 3 2 1 33 33 H 1.08002 * 125.01867 * 359.97438 * 5 4 2 34 34 H 0.96998 * 125.01337 * 180.02562 * 6 5 4 35 35 H 1.08001 * 119.88464 * 0.68656 * 8 7 6 36 36 H 1.07999 * 119.66308 * 180.29292 * 9 8 7 37 37 H 0.96999 * 120.00399 * 359.97438 * 13 11 10 38 38 H 1.08998 * 113.61452 * 254.53060 * 16 14 13 39 39 H 1.08993 * 113.61664 * 25.43619 * 16 14 13 40 40 H 1.08007 * 120.02680 * 359.97438 * 21 20 19 41 41 H 1.08007 * 119.97200 * 180.27797 * 22 21 20 42 42 H 1.08007 * 119.94237 * 179.74774 * 23 22 21 43 43 H 1.08001 * 119.97264 * 179.97438 * 24 23 22 44 44 H 1.08003 * 120.02085 * 179.97438 * 25 24 23 45 45 H 1.08994 * 113.61452 * 334.57342 * 26 14 13 46 46 H 1.09000 * 113.60911 * 105.47564 * 26 14 13 47 47 H 1.08001 * 120.30674 * 179.97438 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.4602 -0.1385 2.3232 6 7 2.8019 -1.1002 3.2352 7 6 2.4894 -2.3450 2.7442 8 6 2.6328 -3.6347 3.2512 9 6 2.2291 -4.7102 2.5165 10 6 1.6712 -4.5368 1.2424 11 6 1.2397 -5.7122 0.4598 12 8 0.7553 -5.5623 -0.6451 13 7 1.3821 -6.9511 0.9709 14 6 0.9535 -8.1174 0.1947 15 1 0.9573 -7.9352 -0.8800 16 6 1.6605 -9.4213 0.6009 17 6 0.3018 -10.1200 0.4259 18 1 0.0945 -10.8691 1.1901 19 8 0.0722 -10.6015 -0.8997 20 6 -0.8207 -11.6162 -1.0416 21 6 -1.5457 -12.0621 0.0539 22 6 -2.4565 -13.0902 -0.0940 23 6 -2.6382 -13.6817 -1.3304 24 6 -1.9127 -13.2430 -2.4227 25 6 -1.0046 -12.2117 -2.2810 26 6 -0.3493 -8.7536 0.7072 27 6 1.5234 -3.2575 0.7143 28 6 1.9348 -2.1576 1.4624 29 1 -0.3933 0.4418 -0.7651 30 1 1.7923 -0.5139 -0.8899 31 1 1.5614 2.4679 1.2085 32 1 3.5345 1.7703 -0.0321 33 1 2.5962 0.9239 2.4625 34 1 3.2016 -0.9282 4.1021 35 1 3.0610 -3.7830 4.2315 36 1 2.3402 -5.7056 2.9205 37 1 1.7682 -7.0706 1.8527 38 1 2.4155 -9.7495 -0.1136 39 1 2.0217 -9.4201 1.6292 40 1 -1.4008 -11.6033 1.0209 41 1 -3.0244 -13.4346 0.7576 42 1 -3.3479 -14.4881 -1.4431 43 1 -2.0562 -13.7070 -3.3873 44 1 -0.4379 -11.8697 -3.1345 45 1 -0.5386 -8.5695 1.7646 46 1 -1.2145 -8.5436 0.0784 47 1 1.0944 -3.1192 -0.2672 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_13287722.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:56:16 Heat of formation + Delta-G solvation = 24.968860 kcal Electronic energy + Delta-G solvation = -30741.340195 eV Core-core repulsion = 26436.765550 eV Total energy + Delta-G solvation = -4304.574645 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.146 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -42.50309 -41.67430 -40.60687 -39.32593 -37.84569 -37.46965 -37.14844 -34.22953 -33.37405 -31.89483 -30.90822 -30.64808 -30.40561 -26.91819 -26.48426 -26.36294 -24.53159 -23.51606 -23.37659 -23.11093 -21.50881 -20.88849 -20.45832 -19.29004 -19.10210 -18.35259 -18.26915 -17.62793 -17.16271 -17.02270 -16.68070 -16.29468 -15.97557 -15.76492 -15.65746 -15.40405 -15.21161 -15.18897 -15.04391 -14.77325 -14.72987 -14.33866 -14.17888 -13.93805 -13.78975 -13.62874 -13.51261 -13.49563 -13.15082 -12.71414 -12.59840 -12.46695 -12.44018 -12.04569 -12.01452 -11.86237 -11.46481 -11.33771 -10.80273 -10.79214 -10.19245 -10.02365 -9.89982 -9.34418 -9.10078 -8.85316 -5.02266 -0.06213 0.16947 0.44079 0.54851 1.28678 1.40880 1.65444 1.92399 1.94873 1.99032 2.08504 2.19838 2.88630 2.94893 3.31450 3.40005 3.52788 3.57460 3.66016 3.72584 3.79583 3.86536 3.92335 3.94802 4.02046 4.11704 4.16448 4.24711 4.32173 4.36613 4.46351 4.47756 4.50156 4.55620 4.58407 4.68801 4.72587 4.77950 4.82452 4.94693 5.00322 5.05305 5.11966 5.24099 5.35797 5.40421 5.46051 5.52094 5.56347 5.57635 5.65922 5.88127 5.95633 6.32698 6.50421 6.56188 6.74419 7.33505 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.039 4.039 3 Si 0.688 3.312 4 C -0.144 4.144 5 C 0.056 3.944 6 N -0.584 5.584 7 C 0.119 3.881 8 C -0.133 4.133 9 C -0.066 4.066 10 C -0.169 4.169 11 C 0.566 3.434 12 O -0.535 6.535 13 N -0.720 5.720 14 C 0.132 3.868 15 H 0.122 0.878 16 C -0.141 4.141 17 C 0.058 3.942 18 H 0.095 0.905 19 O -0.293 6.293 20 C 0.129 3.871 21 C -0.209 4.209 22 C -0.081 4.081 23 C -0.158 4.158 24 C -0.080 4.080 25 C -0.152 4.152 26 C -0.170 4.170 27 C 0.010 3.990 28 C -0.101 4.101 29 H 0.380 0.620 30 H 0.073 0.927 31 H -0.253 1.253 32 H -0.256 1.256 33 H 0.170 0.830 34 H 0.422 0.578 35 H 0.128 0.872 36 H 0.129 0.871 37 H 0.399 0.601 38 H 0.090 0.910 39 H 0.104 0.896 40 H 0.129 0.871 41 H 0.125 0.875 42 H 0.124 0.876 43 H 0.130 0.870 44 H 0.131 0.869 45 H 0.098 0.902 46 H 0.083 0.917 47 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.059 0.942 3.484 4.156 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.150 4.150 3 Si 0.588 3.412 4 C -0.151 4.151 5 C -0.071 4.071 6 N -0.187 5.187 7 C 0.011 3.989 8 C -0.154 4.154 9 C -0.086 4.086 10 C -0.174 4.174 11 C 0.355 3.645 12 O -0.412 6.412 13 N -0.372 5.372 14 C 0.027 3.973 15 H 0.140 0.860 16 C -0.179 4.179 17 C 0.001 3.999 18 H 0.113 0.887 19 O -0.206 6.206 20 C 0.084 3.916 21 C -0.228 4.228 22 C -0.099 4.099 23 C -0.177 4.177 24 C -0.098 4.098 25 C -0.170 4.170 26 C -0.209 4.209 27 C -0.009 4.009 28 C -0.106 4.106 29 H 0.228 0.772 30 H 0.090 0.910 31 H -0.178 1.178 32 H -0.180 1.180 33 H 0.187 0.813 34 H 0.259 0.741 35 H 0.146 0.854 36 H 0.147 0.853 37 H 0.235 0.765 38 H 0.108 0.892 39 H 0.122 0.878 40 H 0.147 0.853 41 H 0.143 0.857 42 H 0.142 0.858 43 H 0.148 0.852 44 H 0.149 0.851 45 H 0.117 0.883 46 H 0.102 0.898 47 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 2.471 1.506 3.627 4.640 hybrid contribution 0.346 -0.507 1.411 1.538 sum 2.817 1.000 5.037 5.858 Atomic orbital electron populations 1.86535 1.17409 1.81823 1.49434 1.24002 0.85459 1.09372 0.96179 0.94974 0.80764 0.77605 0.87822 1.19644 1.07856 0.91338 0.96247 1.21583 1.01931 0.94069 0.89489 1.41688 1.54747 1.04173 1.18063 1.18441 0.99870 0.86487 0.94149 1.19658 1.05816 0.88721 1.01186 1.20578 0.96693 0.98303 0.92996 1.19551 1.08248 0.93272 0.96300 1.18193 0.77707 0.82937 0.85667 1.90798 1.44199 1.85984 1.20222 1.45872 1.64785 1.05601 1.20937 1.22517 0.93828 0.82887 0.98081 0.85996 1.23582 0.96478 0.94371 1.03426 1.23174 0.97568 0.95363 0.83813 0.88733 1.86087 1.57766 1.48026 1.28719 1.19024 0.89989 0.88107 0.94452 1.21278 1.01094 1.01878 0.98513 1.20988 0.96456 0.94768 0.97665 1.21126 1.01724 1.01782 0.93030 1.21026 0.94471 0.95253 0.99085 1.20496 1.02195 0.98590 0.95765 1.24058 0.99277 0.94735 1.02868 1.20682 0.92215 0.89123 0.98895 1.18902 1.04646 0.92747 0.94291 0.77228 0.90950 1.17788 1.18018 0.81315 0.74070 0.85365 0.85341 0.76473 0.89160 0.87759 0.85319 0.85731 0.85789 0.85216 0.85106 0.88326 0.89781 0.84278 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.78 12.86 -35.23 -0.45 -1.23 16 2 C -0.04 -0.03 3.05 36.01 0.11 0.08 16 3 Si 0.69 -0.86 30.80 -169.99 -5.23 -6.09 16 4 C -0.14 -0.42 5.61 -102.69 -0.58 -1.00 16 5 C 0.06 0.07 10.43 -16.73 -0.17 -0.11 16 6 N -0.58 -0.07 6.05 -10.61 -0.06 -0.14 16 7 C 0.12 0.23 7.27 -83.95 -0.61 -0.38 16 8 C -0.13 -0.02 10.00 -39.86 -0.40 -0.42 16 9 C -0.07 0.00 9.46 -39.54 -0.37 -0.38 16 10 C -0.17 -0.48 5.87 -104.97 -0.62 -1.09 16 11 C 0.57 2.15 7.76 -12.42 -0.10 2.05 16 12 O -0.53 -4.13 15.95 5.30 0.08 -4.05 16 13 N -0.72 -0.24 5.31 -54.01 -0.29 -0.53 16 14 C 0.13 0.09 4.15 -67.11 -0.28 -0.19 16 15 H 0.12 0.41 7.50 -51.93 -0.39 0.02 16 16 C -0.14 0.21 7.66 -25.91 -0.20 0.02 16 17 C 0.06 -0.01 3.75 -25.83 -0.10 -0.11 16 18 H 0.09 -0.16 5.95 -51.93 -0.31 -0.46 16 19 O -0.29 -0.76 10.07 -19.44 -0.20 -0.95 16 20 C 0.13 0.35 6.68 -39.22 -0.26 0.09 16 21 C -0.21 -0.31 9.02 -39.43 -0.36 -0.67 16 22 C -0.08 -0.08 10.04 -39.61 -0.40 -0.48 16 23 C -0.16 -0.17 10.04 -39.56 -0.40 -0.56 16 24 C -0.08 -0.10 10.04 -39.60 -0.40 -0.50 16 25 C -0.15 -0.35 9.99 -39.43 -0.39 -0.75 16 26 C -0.17 0.00 7.72 -25.83 -0.20 -0.20 16 27 C 0.01 0.04 9.64 -38.86 -0.37 -0.33 16 28 C -0.10 -0.38 6.34 -105.15 -0.67 -1.05 16 29 H 0.38 -1.40 8.74 45.56 0.40 -1.00 16 30 H 0.07 0.00 7.96 -51.93 -0.41 -0.42 16 31 H -0.25 -0.28 7.04 56.52 0.40 0.11 16 32 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 33 H 0.17 -0.13 6.30 -52.49 -0.33 -0.46 16 34 H 0.42 -1.34 8.96 -40.82 -0.37 -1.71 16 35 H 0.13 -0.32 8.06 -52.49 -0.42 -0.74 16 36 H 0.13 -0.42 6.36 -52.49 -0.33 -0.76 16 37 H 0.40 -1.10 6.71 -40.82 -0.27 -1.37 16 38 H 0.09 -0.08 8.14 -51.93 -0.42 -0.51 16 39 H 0.10 -0.41 8.11 -51.93 -0.42 -0.83 16 40 H 0.13 -0.05 5.91 -52.48 -0.31 -0.36 16 41 H 0.12 -0.12 8.06 -52.48 -0.42 -0.54 16 42 H 0.12 -0.09 8.06 -52.48 -0.42 -0.52 16 43 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 44 H 0.13 0.18 8.06 -52.48 -0.42 -0.24 16 45 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 46 H 0.08 0.16 8.14 -51.93 -0.42 -0.27 16 47 H 0.14 0.66 7.64 -52.49 -0.40 0.26 16 LS Contribution 394.60 15.07 5.95 5.95 Total: 0.00 -11.12 394.60 -12.69 -23.82 By element: Atomic # 1 Polarization: -5.07 SS G_CDS: -5.73 Total: -10.80 kcal Atomic # 6 Polarization: 0.78 SS G_CDS: -6.76 Total: -5.98 kcal Atomic # 7 Polarization: -0.31 SS G_CDS: -0.35 Total: -0.66 kcal Atomic # 8 Polarization: -5.67 SS G_CDS: -0.56 Total: -6.23 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.23 Total: -6.09 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -11.12 -12.69 -23.82 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_13287722.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.785 kcal (2) G-P(sol) polarization free energy of solvation -11.122 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.663 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.694 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.816 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.969 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds