Wall clock time and date at job start Sat Mar 6 2021 18:56:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86305 * 109.46957 * 2 1 4 4 C 1.50704 * 109.47064 * 119.99573 * 2 1 3 5 5 C 1.34191 * 126.54041 * 255.02871 * 4 2 1 6 6 N 1.36867 * 109.96671 * 179.97438 * 5 4 2 7 7 C 1.37410 * 109.98093 * 359.74318 * 6 5 4 8 8 C 1.39321 * 133.24918 * 179.56245 * 7 6 5 9 9 C 1.36358 * 120.23764 * 180.40388 * 8 7 6 10 10 C 1.40163 * 120.66713 * 0.27969 * 9 8 7 11 11 C 1.47658 * 119.97581 * 179.97438 * 10 9 8 12 12 O 1.21574 * 119.99984 * 179.97438 * 11 10 9 13 13 N 1.34772 * 119.99290 * 0.02562 * 11 10 9 14 14 C 1.46505 * 119.99471 * 179.97438 * 13 11 10 15 15 H 1.09005 * 112.84922 * 25.33753 * 14 13 11 16 16 C 1.53788 * 113.61023 * 156.52616 * 14 13 11 17 17 C 1.53784 * 87.07649 * 139.98603 * 16 14 13 18 18 H 1.09002 * 113.61116 * 220.01801 * 17 16 14 19 19 O 1.42894 * 113.61870 * 89.19984 * 17 16 14 20 20 C 1.35904 * 117.00173 * 156.68154 * 19 17 16 21 21 C 1.38729 * 120.05658 * 5.43602 * 20 19 17 22 22 C 1.38144 * 119.94414 * 179.74389 * 21 20 19 23 23 C 1.38255 * 120.05561 * 0.50742 * 22 21 20 24 24 C 1.38270 * 120.11293 * 359.76785 * 23 22 21 25 25 C 1.38146 * 120.05298 * 359.97438 * 24 23 22 26 26 C 1.53781 * 113.61602 * 254.13225 * 14 13 11 27 27 C 1.39193 * 120.05508 * 359.97273 * 10 9 8 28 28 C 1.39233 * 119.39272 * 0.02562 * 27 10 9 29 29 H 0.96708 * 113.99794 * 59.99944 * 1 2 3 30 30 H 1.08997 * 109.47149 * 239.99734 * 2 1 3 31 31 H 1.48497 * 110.00091 * 60.00120 * 3 2 1 32 32 H 1.48498 * 109.99774 * 181.31607 * 3 2 1 33 33 H 1.08002 * 125.01867 * 359.97438 * 5 4 2 34 34 H 0.96998 * 125.01337 * 180.02562 * 6 5 4 35 35 H 1.08001 * 119.88464 * 0.68656 * 8 7 6 36 36 H 1.07999 * 119.66308 * 180.29292 * 9 8 7 37 37 H 0.96999 * 120.00399 * 359.97438 * 13 11 10 38 38 H 1.08998 * 113.61452 * 254.53060 * 16 14 13 39 39 H 1.08993 * 113.61664 * 25.43619 * 16 14 13 40 40 H 1.08007 * 120.02680 * 359.97438 * 21 20 19 41 41 H 1.08007 * 119.97200 * 180.27797 * 22 21 20 42 42 H 1.08007 * 119.94237 * 179.74774 * 23 22 21 43 43 H 1.08001 * 119.97264 * 179.97438 * 24 23 22 44 44 H 1.08003 * 120.02085 * 179.97438 * 25 24 23 45 45 H 1.08994 * 113.61452 * 334.57342 * 26 14 13 46 46 H 1.09000 * 113.60911 * 105.47564 * 26 14 13 47 47 H 1.08001 * 120.30674 * 179.97438 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.4602 -0.1385 2.3232 6 7 2.8019 -1.1002 3.2352 7 6 2.4894 -2.3450 2.7442 8 6 2.6328 -3.6347 3.2512 9 6 2.2291 -4.7102 2.5165 10 6 1.6712 -4.5368 1.2424 11 6 1.2397 -5.7122 0.4598 12 8 0.7553 -5.5623 -0.6451 13 7 1.3821 -6.9511 0.9709 14 6 0.9535 -8.1174 0.1947 15 1 0.9573 -7.9352 -0.8800 16 6 1.6605 -9.4213 0.6009 17 6 0.3018 -10.1200 0.4259 18 1 0.0945 -10.8691 1.1901 19 8 0.0722 -10.6015 -0.8997 20 6 -0.8207 -11.6162 -1.0416 21 6 -1.5457 -12.0621 0.0539 22 6 -2.4565 -13.0902 -0.0940 23 6 -2.6382 -13.6817 -1.3304 24 6 -1.9127 -13.2430 -2.4227 25 6 -1.0046 -12.2117 -2.2810 26 6 -0.3493 -8.7536 0.7072 27 6 1.5234 -3.2575 0.7143 28 6 1.9348 -2.1576 1.4624 29 1 -0.3933 0.4418 -0.7651 30 1 1.7923 -0.5139 -0.8899 31 1 1.5614 2.4679 1.2085 32 1 3.5345 1.7703 -0.0321 33 1 2.5962 0.9239 2.4625 34 1 3.2016 -0.9282 4.1021 35 1 3.0610 -3.7830 4.2315 36 1 2.3402 -5.7056 2.9205 37 1 1.7682 -7.0706 1.8527 38 1 2.4155 -9.7495 -0.1136 39 1 2.0217 -9.4201 1.6292 40 1 -1.4008 -11.6033 1.0209 41 1 -3.0244 -13.4346 0.7576 42 1 -3.3479 -14.4881 -1.4431 43 1 -2.0562 -13.7070 -3.3873 44 1 -0.4379 -11.8697 -3.1345 45 1 -0.5386 -8.5695 1.7646 46 1 -1.2145 -8.5436 0.0784 47 1 1.0944 -3.1192 -0.2672 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11987230_13287722.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:56:15 Heat of formation + Delta-G solvation = 24.176348 kcal Electronic energy + Delta-G solvation = -30741.374561 eV Core-core repulsion = 26436.765550 eV Total energy + Delta-G solvation = -4304.609011 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.146 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.58078 -41.74840 -40.79703 -39.41029 -37.93414 -37.53806 -37.29857 -34.40838 -33.46311 -31.95517 -31.01122 -30.72452 -30.48885 -26.88643 -26.55801 -26.43899 -24.64242 -23.58695 -23.45239 -23.18704 -21.69377 -20.94229 -20.53651 -19.35035 -19.17341 -18.46441 -18.33961 -17.70287 -17.25839 -17.08517 -16.74844 -16.41163 -16.16313 -15.85400 -15.72353 -15.47848 -15.34867 -15.24131 -15.10073 -14.89899 -14.84890 -14.38589 -14.23734 -14.01055 -13.82914 -13.65321 -13.60020 -13.49506 -13.18152 -12.78782 -12.67633 -12.55074 -12.49195 -12.10159 -12.07388 -11.93666 -11.48640 -11.38192 -11.08942 -10.91154 -10.21857 -10.19667 -9.97590 -9.45046 -9.19122 -8.94101 -4.93872 -0.24612 0.09524 0.36795 0.45856 1.31800 1.33193 1.69869 1.76775 1.92803 1.95993 2.06513 2.08334 2.79624 2.81304 3.30396 3.41647 3.47637 3.57822 3.64924 3.68878 3.72601 3.85534 3.90352 3.97340 4.01481 4.07239 4.15801 4.17905 4.30912 4.32451 4.43295 4.47004 4.48336 4.53693 4.61370 4.66023 4.72021 4.72832 4.82384 4.91861 4.92972 4.98915 5.06697 5.17703 5.25902 5.33195 5.35526 5.44218 5.45635 5.47146 5.59217 5.85262 5.86448 6.41688 6.44865 6.47662 6.93070 7.14848 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.570 6.570 2 C -0.060 4.060 3 Si 0.790 3.210 4 C -0.181 4.181 5 C 0.058 3.942 6 N -0.573 5.573 7 C 0.110 3.890 8 C -0.125 4.125 9 C -0.061 4.061 10 C -0.177 4.177 11 C 0.561 3.439 12 O -0.588 6.588 13 N -0.698 5.698 14 C 0.121 3.879 15 H 0.085 0.915 16 C -0.122 4.122 17 C 0.053 3.947 18 H 0.116 0.884 19 O -0.314 6.314 20 C 0.111 3.889 21 C -0.215 4.215 22 C -0.087 4.087 23 C -0.167 4.167 24 C -0.087 4.087 25 C -0.174 4.174 26 C -0.165 4.165 27 C -0.017 4.017 28 C -0.130 4.130 29 H 0.399 0.601 30 H 0.069 0.931 31 H -0.280 1.280 32 H -0.286 1.286 33 H 0.188 0.812 34 H 0.438 0.562 35 H 0.165 0.835 36 H 0.169 0.831 37 H 0.418 0.582 38 H 0.084 0.916 39 H 0.142 0.858 40 H 0.147 0.853 41 H 0.146 0.854 42 H 0.142 0.858 43 H 0.146 0.854 44 H 0.129 0.871 45 H 0.123 0.877 46 H 0.057 0.943 47 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.806 0.214 6.509 7.092 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.379 6.379 2 C -0.169 4.169 3 Si 0.693 3.307 4 C -0.188 4.188 5 C -0.069 4.069 6 N -0.176 5.176 7 C 0.001 3.999 8 C -0.145 4.145 9 C -0.080 4.080 10 C -0.181 4.181 11 C 0.351 3.649 12 O -0.470 6.470 13 N -0.351 5.351 14 C 0.016 3.984 15 H 0.103 0.897 16 C -0.160 4.160 17 C -0.004 4.004 18 H 0.134 0.866 19 O -0.228 6.228 20 C 0.066 3.934 21 C -0.234 4.234 22 C -0.105 4.105 23 C -0.185 4.185 24 C -0.105 4.105 25 C -0.193 4.193 26 C -0.203 4.203 27 C -0.037 4.037 28 C -0.135 4.135 29 H 0.249 0.751 30 H 0.087 0.913 31 H -0.206 1.206 32 H -0.213 1.213 33 H 0.205 0.795 34 H 0.279 0.721 35 H 0.183 0.817 36 H 0.186 0.814 37 H 0.258 0.742 38 H 0.102 0.898 39 H 0.159 0.841 40 H 0.164 0.836 41 H 0.164 0.836 42 H 0.160 0.840 43 H 0.164 0.836 44 H 0.147 0.853 45 H 0.142 0.858 46 H 0.076 0.924 47 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 3.221 0.738 6.685 7.458 hybrid contribution 0.093 -0.311 0.471 0.572 sum 3.315 0.427 7.156 7.898 Atomic orbital electron populations 1.86476 1.18029 1.82557 1.50857 1.24438 0.85229 1.11659 0.95586 0.93734 0.77298 0.73944 0.85726 1.20114 1.09296 0.91578 0.97824 1.21878 1.00922 0.95006 0.89126 1.41682 1.54085 1.03355 1.18525 1.18742 0.99732 0.87807 0.93647 1.20095 1.04516 0.87575 1.02348 1.20949 0.95293 1.00357 0.91417 1.19605 1.08868 0.92117 0.97554 1.18487 0.77133 0.84177 0.85114 1.90769 1.46823 1.86779 1.22591 1.45690 1.63581 1.04349 1.21437 1.22472 0.95581 0.83902 0.96458 0.89704 1.23602 0.95554 0.91594 1.05266 1.23377 0.98214 0.95525 0.83257 0.86619 1.86067 1.57929 1.48233 1.30603 1.19261 0.90594 0.88476 0.95076 1.21518 1.00916 1.02036 0.98895 1.21329 0.96321 0.94444 0.98440 1.21442 1.01873 1.02204 0.93003 1.21290 0.94113 0.94947 1.00161 1.20705 1.03072 0.99516 0.96019 1.24062 0.97685 0.94927 1.03668 1.20615 0.94026 0.90522 0.98533 1.19168 1.05613 0.93151 0.95549 0.75089 0.91314 1.20637 1.21313 0.79517 0.72081 0.81747 0.81400 0.74218 0.89753 0.84059 0.83581 0.83635 0.83999 0.83606 0.85340 0.85849 0.92400 0.86860 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -2.87 12.86 -148.98 -1.92 -4.78 16 2 C -0.06 -0.23 3.05 71.24 0.22 -0.01 16 3 Si 0.79 -1.62 30.80 68.60 2.11 0.49 16 4 C -0.18 -1.39 5.61 -18.61 -0.10 -1.49 16 5 C 0.06 0.16 10.43 82.98 0.87 1.03 16 6 N -0.57 0.20 6.05 -187.47 -1.13 -0.94 16 7 C 0.11 0.41 7.27 39.18 0.28 0.70 16 8 C -0.13 0.20 10.00 22.09 0.22 0.42 16 9 C -0.06 0.07 9.46 22.30 0.21 0.29 16 10 C -0.18 -1.25 5.87 -20.09 -0.12 -1.37 16 11 C 0.56 5.43 7.76 86.73 0.67 6.11 16 12 O -0.59 -11.57 15.95 -3.95 -0.06 -11.63 16 13 N -0.70 -0.55 5.31 -443.07 -2.35 -2.90 16 14 C 0.12 0.29 4.15 45.52 0.19 0.48 16 15 H 0.08 0.88 7.50 -2.38 -0.02 0.86 16 16 C -0.12 0.49 7.66 31.12 0.24 0.72 16 17 C 0.05 -0.04 3.75 31.18 0.12 0.08 16 18 H 0.12 -0.58 5.95 -2.39 -0.01 -0.59 16 19 O -0.31 -2.10 10.07 -92.46 -0.93 -3.03 16 20 C 0.11 0.72 6.68 22.50 0.15 0.88 16 21 C -0.22 -0.61 9.02 22.36 0.20 -0.41 16 22 C -0.09 -0.13 10.04 22.25 0.22 0.10 16 23 C -0.17 -0.30 10.04 22.28 0.22 -0.08 16 24 C -0.09 -0.28 10.04 22.26 0.22 -0.05 16 25 C -0.17 -1.10 9.99 22.36 0.22 -0.87 16 26 C -0.16 -0.06 7.72 31.18 0.24 0.18 16 27 C -0.02 -0.20 9.64 22.74 0.22 0.02 16 28 C -0.13 -1.25 6.34 -20.21 -0.13 -1.38 16 29 H 0.40 -2.24 8.74 -74.05 -0.65 -2.88 16 30 H 0.07 0.21 7.96 -2.39 -0.02 0.19 16 31 H -0.28 -0.63 7.04 99.48 0.70 0.07 16 32 H -0.29 -0.83 7.11 99.48 0.71 -0.12 16 33 H 0.19 -0.33 6.30 -2.91 -0.02 -0.35 16 34 H 0.44 -3.46 8.96 -92.71 -0.83 -4.29 16 35 H 0.17 -1.47 8.06 -2.91 -0.02 -1.50 16 36 H 0.17 -1.69 6.36 -2.91 -0.02 -1.71 16 37 H 0.42 -3.16 6.71 -92.71 -0.62 -3.79 16 38 H 0.08 -0.17 8.14 -2.39 -0.02 -0.19 16 39 H 0.14 -1.60 8.11 -2.39 -0.02 -1.62 16 40 H 0.15 -0.27 5.91 -2.91 -0.02 -0.28 16 41 H 0.15 -0.50 8.06 -2.91 -0.02 -0.52 16 42 H 0.14 -0.35 8.06 -2.91 -0.02 -0.37 16 43 H 0.15 -0.19 8.06 -2.91 -0.02 -0.21 16 44 H 0.13 0.68 8.06 -2.91 -0.02 0.66 16 45 H 0.12 -0.59 8.14 -2.39 -0.02 -0.61 16 46 H 0.06 0.34 8.14 -2.39 -0.02 0.33 16 47 H 0.11 1.72 7.64 -2.91 -0.02 1.70 16 Total: 0.00 -31.74 394.60 -0.93 -32.67 By element: Atomic # 1 Polarization: -14.20 SS G_CDS: -1.02 Total: -15.21 kcal Atomic # 6 Polarization: 0.96 SS G_CDS: 4.37 Total: 5.33 kcal Atomic # 7 Polarization: -0.35 SS G_CDS: -3.49 Total: -3.83 kcal Atomic # 8 Polarization: -16.53 SS G_CDS: -2.91 Total: -19.44 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: 2.11 Total: 0.49 kcal Total: -31.74 -0.93 -32.67 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_13287722.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.845 kcal (2) G-P(sol) polarization free energy of solvation -31.742 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.104 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.927 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.669 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.176 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds