Wall clock time and date at job start Sat Mar 6 2021 18:56:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86304 * 109.47177 * 2 1 4 4 C 1.50704 * 109.47075 * 240.00464 * 2 1 3 5 5 C 1.38359 * 120.34255 * 299.99686 * 4 2 1 6 6 C 1.40033 * 118.28678 * 180.02562 * 5 4 2 7 7 C 1.47832 * 120.55835 * 179.97438 * 6 5 4 8 8 O 1.21552 * 120.00367 * 0.02562 * 7 6 5 9 9 N 1.34783 * 120.00047 * 180.02562 * 7 6 5 10 10 C 1.46498 * 120.00120 * 180.02562 * 9 7 6 11 11 H 1.08993 * 112.84675 * 23.80077 * 10 9 7 12 12 C 1.53777 * 113.61292 * 155.00244 * 10 9 7 13 13 C 1.53772 * 87.08305 * 139.97922 * 12 10 9 14 14 H 1.09005 * 113.61677 * 220.01936 * 13 12 10 15 15 O 1.42904 * 113.61717 * 89.19879 * 13 12 10 16 16 C 1.35891 * 117.00347 * 156.68520 * 15 13 12 17 17 C 1.38739 * 120.05537 * 5.43701 * 16 15 13 18 18 C 1.38153 * 119.94096 * 179.70142 * 17 16 15 19 19 C 1.38268 * 120.05660 * 0.59444 * 18 17 16 20 20 C 1.38272 * 120.11019 * 359.67536 * 19 18 17 21 21 C 1.38146 * 120.05424 * 0.02813 * 20 19 18 22 22 C 1.53777 * 113.61101 * 252.49536 * 10 9 7 23 23 C 1.39522 * 118.87610 * 0.02562 * 6 5 4 24 24 N 1.31692 * 120.57489 * 0.24853 * 23 6 5 25 25 C 1.31931 * 121.87222 * 359.48207 * 24 23 6 26 26 H 0.96706 * 114.00503 * 59.99753 * 1 2 3 27 27 H 1.08996 * 109.47612 * 120.00040 * 2 1 3 28 28 H 1.48502 * 110.00037 * 298.68353 * 3 2 1 29 29 H 1.48502 * 109.99952 * 59.99933 * 3 2 1 30 30 H 1.08002 * 120.85897 * 0.02562 * 5 4 2 31 31 H 0.97007 * 119.99604 * 0.02562 * 9 7 6 32 32 H 1.08999 * 113.61308 * 254.53006 * 12 10 9 33 33 H 1.09000 * 113.61711 * 25.43117 * 12 10 9 34 34 H 1.07994 * 120.02773 * 359.97438 * 17 16 15 35 35 H 1.08003 * 119.96754 * 180.27141 * 18 17 16 36 36 H 1.07992 * 119.94259 * 179.70493 * 19 18 17 37 37 H 1.07998 * 119.96803 * 180.02562 * 20 19 18 38 38 H 1.07997 * 120.02364 * 180.02562 * 21 20 19 39 39 H 1.08997 * 113.62039 * 334.57147 * 22 10 9 40 40 H 1.09001 * 113.61646 * 105.47249 * 22 10 9 41 41 H 1.08006 * 119.70982 * 179.97438 * 23 6 5 42 42 H 1.08001 * 119.45664 * 180.24944 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9312 -0.7103 -1.2306 5 6 1.6014 -2.0349 -1.4566 6 6 2.0920 -2.6528 -2.6135 7 6 1.7711 -4.0662 -2.9044 8 8 1.0756 -4.7021 -2.1366 9 7 2.2497 -4.6499 -4.0210 10 6 1.9313 -6.0505 -4.3096 11 1 1.0164 -6.3857 -3.8213 12 6 1.9954 -6.4011 -5.8055 13 6 2.6457 -7.7299 -5.3857 14 1 3.4593 -8.0437 -6.0396 15 8 1.7031 -8.7737 -5.1326 16 6 2.1542 -10.0513 -5.2378 17 6 3.5006 -10.2962 -5.4661 18 6 3.9576 -11.5960 -5.5664 19 6 3.0726 -12.6521 -5.4518 20 6 1.7294 -12.4105 -5.2298 21 6 1.2683 -11.1127 -5.1226 22 6 3.1210 -7.0052 -4.1153 23 6 2.8896 -1.9121 -3.4864 24 7 3.1804 -0.6547 -3.2245 25 6 2.7282 -0.0453 -2.1452 26 1 -0.3934 0.4417 -0.7650 27 1 1.7923 -0.5138 0.8899 28 1 1.5878 2.4586 -1.2242 29 1 1.5614 2.4679 1.2085 30 1 0.9815 -2.5783 -0.7588 31 1 2.8051 -4.1426 -4.6336 32 1 1.0158 -6.5214 -6.2681 33 1 2.6583 -5.7524 -6.3780 34 1 4.1914 -9.4715 -5.5609 35 1 5.0064 -11.7872 -5.7398 36 1 3.4311 -13.6674 -5.5353 37 1 1.0402 -13.2372 -5.1402 38 1 0.2192 -10.9246 -4.9487 39 1 4.0916 -6.5217 -4.2257 40 1 3.0502 -7.6133 -3.2134 41 1 3.2755 -2.3754 -4.3825 42 1 2.9878 0.9884 -1.9709 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_13287814.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:56:33 Heat of formation + Delta-G solvation = 2.236417 kcal Electronic energy + Delta-G solvation = -26058.557481 eV Core-core repulsion = 22164.986983 eV Total energy + Delta-G solvation = -3893.570498 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.130 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.06507 -41.56413 -40.40239 -39.26985 -38.11673 -37.36148 -34.64917 -33.80069 -32.87403 -31.92530 -30.64038 -27.39404 -27.04492 -26.91291 -25.13117 -23.91028 -23.45093 -23.23942 -21.71737 -20.88384 -19.47239 -19.17274 -18.27418 -17.94712 -17.81539 -17.20469 -17.09502 -16.73126 -16.54596 -16.22866 -16.07882 -15.88992 -15.48131 -15.39058 -14.98922 -14.65367 -14.43202 -14.38109 -14.26683 -13.98121 -13.72822 -13.57778 -13.48850 -13.29739 -12.84672 -12.60659 -12.51414 -12.13121 -12.11474 -11.55934 -11.45882 -11.33446 -11.10332 -10.76261 -10.58259 -10.42250 -10.18448 -9.94650 -9.15492 -5.10409 -0.61942 -0.06254 0.39426 0.49938 1.09206 1.45486 1.67153 1.82859 1.92852 2.01198 2.58374 2.83803 2.96411 3.18881 3.21673 3.29838 3.33219 3.55410 3.59072 3.63810 3.70615 3.76993 3.86710 3.95060 4.05615 4.09407 4.16470 4.27282 4.37941 4.42545 4.45214 4.50041 4.59387 4.65519 4.72134 4.79251 4.83848 4.85070 4.95217 5.06637 5.23798 5.32811 5.36352 5.47708 5.61598 5.82900 6.23637 6.27567 6.44251 6.58044 7.02423 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.071 4.071 3 Si 0.685 3.315 4 C -0.177 4.177 5 C 0.012 3.988 6 C -0.189 4.189 7 C 0.566 3.434 8 O -0.525 6.525 9 N -0.716 5.716 10 C 0.130 3.870 11 H 0.124 0.876 12 C -0.141 4.141 13 C 0.059 3.941 14 H 0.096 0.904 15 O -0.293 6.293 16 C 0.128 3.872 17 C -0.209 4.209 18 C -0.081 4.081 19 C -0.158 4.158 20 C -0.080 4.080 21 C -0.152 4.152 22 C -0.170 4.170 23 C 0.139 3.861 24 N -0.477 5.477 25 C 0.129 3.871 26 H 0.377 0.623 27 H 0.125 0.875 28 H -0.255 1.255 29 H -0.250 1.250 30 H 0.153 0.847 31 H 0.401 0.599 32 H 0.091 0.909 33 H 0.106 0.894 34 H 0.129 0.871 35 H 0.125 0.875 36 H 0.124 0.876 37 H 0.130 0.870 38 H 0.131 0.869 39 H 0.100 0.900 40 H 0.084 0.916 41 H 0.161 0.839 42 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.706 0.997 -3.149 5.750 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.182 4.182 3 Si 0.585 3.415 4 C -0.180 4.180 5 C -0.015 4.015 6 C -0.194 4.194 7 C 0.352 3.648 8 O -0.401 6.401 9 N -0.368 5.368 10 C 0.025 3.975 11 H 0.142 0.858 12 C -0.179 4.179 13 C 0.001 3.999 14 H 0.114 0.886 15 O -0.206 6.206 16 C 0.083 3.917 17 C -0.227 4.227 18 C -0.099 4.099 19 C -0.176 4.176 20 C -0.098 4.098 21 C -0.170 4.170 22 C -0.209 4.209 23 C -0.019 4.019 24 N -0.185 5.185 25 C -0.027 4.027 26 H 0.225 0.775 27 H 0.143 0.857 28 H -0.180 1.180 29 H -0.175 1.175 30 H 0.170 0.830 31 H 0.237 0.763 32 H 0.109 0.891 33 H 0.124 0.876 34 H 0.147 0.853 35 H 0.143 0.857 36 H 0.142 0.858 37 H 0.148 0.852 38 H 0.149 0.851 39 H 0.118 0.882 40 H 0.103 0.897 41 H 0.178 0.822 42 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 4.399 1.606 -2.574 5.344 hybrid contribution -1.023 -0.444 -0.330 1.163 sum 3.376 1.162 -2.903 4.602 Atomic orbital electron populations 1.86646 1.17227 1.79905 1.49358 1.25002 0.84285 1.11214 0.97664 0.95098 0.91394 0.73919 0.81067 1.21378 1.01531 0.95687 0.99379 1.21649 0.92612 0.92927 0.94269 1.21043 1.04074 0.95569 0.98721 1.18050 0.79511 0.85873 0.81341 1.90833 1.37328 1.64611 1.47338 1.45885 1.53432 1.13152 1.24297 1.22593 0.99565 0.79532 0.95772 0.85789 1.23596 1.03428 0.94421 0.96425 1.23120 0.92367 0.86475 0.97928 0.88592 1.86084 1.37859 1.12069 1.84618 1.19018 0.92541 0.83921 0.96180 1.21277 0.94643 0.98375 1.08442 1.20998 0.99829 0.91920 0.97116 1.21136 0.93592 0.99345 1.03518 1.21032 0.95871 0.95867 0.97052 1.20496 0.99735 0.90717 1.06073 1.24031 0.99401 0.98326 0.99154 1.23030 0.91826 0.89752 0.97316 1.67739 1.21577 1.10116 1.19064 1.22904 0.91463 0.99757 0.88619 0.77478 0.85720 1.17964 1.17483 0.82970 0.76335 0.89065 0.87603 0.85306 0.85691 0.85756 0.85195 0.85117 0.88177 0.89715 0.82176 0.81971 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.27 12.78 -35.23 -0.45 -0.72 16 2 C -0.07 0.09 2.83 36.01 0.10 0.19 16 3 Si 0.69 -1.53 29.82 -169.99 -5.07 -6.60 16 4 C -0.18 0.10 5.39 -104.54 -0.56 -0.46 16 5 C 0.01 0.01 9.31 -38.86 -0.36 -0.35 16 6 C -0.19 -0.08 5.89 -104.82 -0.62 -0.70 16 7 C 0.57 0.96 7.78 -12.33 -0.10 0.86 16 8 O -0.53 -3.06 16.02 5.32 0.09 -2.97 16 9 N -0.72 1.04 5.31 -53.97 -0.29 0.76 16 10 C 0.13 -0.09 4.18 -67.12 -0.28 -0.37 16 11 H 0.12 0.25 7.46 -51.93 -0.39 -0.14 16 12 C -0.14 0.36 7.66 -25.93 -0.20 0.17 16 13 C 0.06 -0.07 3.75 -25.92 -0.10 -0.17 16 14 H 0.10 -0.24 5.95 -51.93 -0.31 -0.55 16 15 O -0.29 -0.52 10.07 -19.40 -0.20 -0.72 16 16 C 0.13 0.26 6.68 -39.21 -0.26 0.00 16 17 C -0.21 -0.18 9.02 -39.43 -0.36 -0.53 16 18 C -0.08 -0.04 10.04 -39.60 -0.40 -0.44 16 19 C -0.16 -0.10 10.04 -39.56 -0.40 -0.49 16 20 C -0.08 -0.07 10.04 -39.60 -0.40 -0.46 16 21 C -0.15 -0.27 9.99 -39.43 -0.39 -0.67 16 22 C -0.17 0.22 7.71 -25.92 -0.20 0.02 16 23 C 0.14 -0.14 10.71 -17.13 -0.18 -0.33 16 24 N -0.48 -0.16 10.35 -12.91 -0.13 -0.29 16 25 C 0.13 -0.10 9.84 -17.47 -0.17 -0.27 16 26 H 0.38 -0.90 8.70 45.56 0.40 -0.50 16 27 H 0.13 -0.24 7.96 -51.93 -0.41 -0.66 16 28 H -0.25 0.11 7.11 56.52 0.40 0.51 16 29 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 30 H 0.15 0.26 7.74 -52.49 -0.41 -0.14 16 31 H 0.40 -1.84 6.79 -40.82 -0.28 -2.12 16 32 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 33 H 0.11 -0.53 8.12 -51.93 -0.42 -0.95 16 34 H 0.13 -0.14 5.91 -52.49 -0.31 -0.45 16 35 H 0.13 -0.18 8.06 -52.48 -0.42 -0.60 16 36 H 0.12 -0.14 8.06 -52.49 -0.42 -0.57 16 37 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 38 H 0.13 0.12 8.06 -52.49 -0.42 -0.30 16 39 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 40 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 41 H 0.16 -0.70 6.42 -52.48 -0.34 -1.04 16 42 H 0.16 -0.47 4.88 -52.49 -0.26 -0.73 16 LS Contribution 356.01 15.07 5.37 5.37 Total: 0.00 -9.16 356.01 -10.43 -19.59 By element: Atomic # 1 Polarization: -5.54 SS G_CDS: -4.88 Total: -10.42 kcal Atomic # 6 Polarization: 0.87 SS G_CDS: -4.87 Total: -4.00 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -0.42 Total: 0.46 kcal Atomic # 8 Polarization: -3.85 SS G_CDS: -0.56 Total: -4.41 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: -5.07 Total: -6.60 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -9.16 -10.43 -19.59 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_13287814.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.827 kcal (2) G-P(sol) polarization free energy of solvation -9.156 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.671 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.435 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.591 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.236 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds