Wall clock time and date at job start Sat Mar 6 2021 18:56:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46902 * 1 3 3 C 1.46900 * 110.99906 * 2 1 4 4 C 1.39042 * 110.99409 * 236.04955 * 2 1 3 5 5 C 1.39205 * 119.92835 * 239.99780 * 4 2 1 6 6 C 1.50700 * 119.96474 * 0.02562 * 5 4 2 7 7 O 1.42903 * 109.46796 * 284.99948 * 6 5 4 8 8 Si 1.86299 * 109.46852 * 165.00053 * 6 5 4 9 9 C 1.37631 * 120.06727 * 180.02562 * 5 4 2 10 10 C 1.39773 * 119.93120 * 359.97438 * 9 5 4 11 11 C 1.47522 * 120.06677 * 180.02562 * 10 9 5 12 12 O 1.21587 * 119.99957 * 359.97438 * 11 10 9 13 13 N 1.34774 * 119.99540 * 180.02562 * 11 10 9 14 14 C 1.46502 * 119.99629 * 179.97438 * 13 11 10 15 15 H 1.09001 * 112.85220 * 336.19938 * 14 13 11 16 16 C 1.53783 * 113.61289 * 107.50038 * 14 13 11 17 17 C 1.53784 * 87.08190 * 89.11875 * 16 14 13 18 18 H 1.09000 * 113.68719 * 270.87406 * 17 16 14 19 19 O 1.42895 * 113.61669 * 139.98030 * 17 16 14 20 20 C 1.35898 * 117.00303 * 104.62314 * 19 17 16 21 21 C 1.38728 * 120.06139 * 173.77818 * 20 19 17 22 22 C 1.38149 * 119.94638 * 179.74752 * 21 20 19 23 23 C 1.38265 * 120.05450 * 0.50537 * 22 21 20 24 24 C 1.38265 * 120.11062 * 359.77037 * 23 22 21 25 25 C 1.38144 * 120.05730 * 359.97438 * 24 23 22 26 26 C 1.53783 * 113.61746 * 204.99960 * 14 13 11 27 27 C 1.39824 * 119.86322 * 359.97438 * 10 9 5 28 28 C 1.37581 * 119.92796 * 359.75197 * 27 10 9 29 29 H 1.09000 * 109.47420 * 183.94767 * 1 2 3 30 30 H 1.09007 * 109.47360 * 63.94839 * 1 2 3 31 31 H 1.09007 * 109.47069 * 303.95387 * 1 2 3 32 32 H 1.09001 * 109.46789 * 60.00600 * 3 2 1 33 33 H 1.08998 * 109.46478 * 180.02562 * 3 2 1 34 34 H 1.09000 * 109.47585 * 300.00180 * 3 2 1 35 35 H 1.09002 * 109.47275 * 44.99342 * 6 5 4 36 36 H 0.96695 * 114.00505 * 59.99917 * 7 6 5 37 37 H 1.48497 * 109.99861 * 299.99427 * 8 6 5 38 38 H 1.48498 * 110.00130 * 61.31793 * 8 6 5 39 39 H 1.07999 * 120.02922 * 179.97438 * 9 5 4 40 40 H 0.97000 * 120.00884 * 359.97438 * 13 11 10 41 41 H 1.09006 * 113.61187 * 203.66377 * 16 14 13 42 42 H 1.08999 * 113.61690 * 334.56799 * 16 14 13 43 43 H 1.08000 * 120.02628 * 359.97438 * 21 20 19 44 44 H 1.07995 * 119.96870 * 180.23329 * 22 21 20 45 45 H 1.07995 * 119.94306 * 179.74952 * 23 22 21 46 46 H 1.07999 * 119.97529 * 180.02562 * 24 23 22 47 47 H 1.08001 * 120.02706 * 179.97438 * 25 24 23 48 48 H 1.08997 * 113.61347 * 25.42901 * 26 14 13 49 49 H 1.08990 * 113.61798 * 156.33649 * 26 14 13 50 50 H 1.08001 * 120.03064 * 179.97438 * 27 10 9 51 51 H 1.08002 * 119.96300 * 180.24713 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.9672 -0.7250 -1.0768 5 6 2.7792 -1.8330 -0.8519 6 6 3.1165 -2.2453 0.5578 7 8 4.0855 -1.3448 1.0984 8 14 3.8114 -3.9739 0.5497 9 6 3.2743 -2.5524 -1.9157 10 6 2.9605 -2.1696 -3.2229 11 6 3.4891 -2.9389 -4.3653 12 8 4.1988 -3.9066 -4.1703 13 7 3.1860 -2.5682 -5.6252 14 6 3.7114 -3.3318 -6.7597 15 1 4.6198 -3.8824 -6.5151 16 6 2.6481 -4.1811 -7.4759 17 6 2.3757 -2.9528 -8.3602 18 1 1.6197 -2.2803 -7.9548 19 8 2.1524 -3.2750 -9.7343 20 6 0.8699 -3.2203 -10.1804 21 6 0.5952 -3.3937 -11.5291 22 6 -0.7099 -3.3429 -11.9791 23 6 -1.7410 -3.1090 -11.0882 24 6 -1.4694 -2.9301 -9.7443 25 6 -0.1665 -2.9853 -9.2885 26 6 3.8178 -2.5129 -8.0571 27 6 2.1437 -1.0568 -3.4454 28 6 1.6473 -0.3452 -2.3777 29 1 -0.3634 -1.0252 0.0707 30 1 -0.3634 0.4514 -0.9233 31 1 -0.3633 0.5740 0.8525 32 1 1.6460 1.8947 0.8901 33 1 3.0850 1.3423 -0.0005 34 1 1.6460 1.8949 -0.8899 35 1 2.2148 -2.2190 1.1697 36 1 3.7910 -0.4245 1.1331 37 1 2.8132 -4.9199 -0.0103 38 1 5.0587 -4.0161 -0.2551 39 1 3.9046 -3.4117 -1.7406 40 1 2.6201 -1.7959 -5.7808 41 1 3.0617 -5.0291 -8.0218 42 1 1.8071 -4.4559 -6.8391 43 1 1.4007 -3.5720 -12.2261 44 1 -0.9245 -3.4816 -13.0284 45 1 -2.7603 -3.0656 -11.4426 46 1 -2.2765 -2.7479 -9.0503 47 1 0.0452 -2.8451 -8.2387 48 1 3.9211 -1.4409 -7.8895 49 1 4.5511 -2.9048 -8.7618 50 1 1.8999 -0.7584 -4.4543 51 1 1.0131 0.5121 -2.5488 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_13422196.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:56:51 Heat of formation + Delta-G solvation = 2.420217 kcal Electronic energy + Delta-G solvation = -32887.003988 eV Core-core repulsion = 28526.828603 eV Total energy + Delta-G solvation = -4360.175385 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.177 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.05153 -41.52658 -40.59251 -39.37544 -37.79065 -37.51922 -37.26881 -34.43164 -32.75456 -31.98254 -31.40893 -30.69103 -28.83109 -27.05823 -26.99285 -26.86648 -25.68186 -23.79178 -23.40602 -23.11802 -22.89574 -21.41533 -20.69445 -19.58350 -19.09648 -18.08911 -17.93771 -17.52059 -17.30044 -16.85161 -16.76001 -16.46734 -16.37781 -16.05829 -16.02923 -15.73382 -15.58661 -15.29621 -15.07726 -15.01530 -14.75479 -14.43362 -14.18439 -14.07776 -13.87644 -13.73807 -13.66639 -13.59994 -13.28127 -13.24353 -13.12155 -12.91721 -12.78310 -12.69220 -12.53177 -12.03570 -12.00433 -11.65240 -11.46676 -11.33945 -11.16464 -10.90244 -10.34183 -10.21928 -9.99155 -9.92853 -9.82077 -9.17897 -4.74983 -0.51018 0.02366 0.35027 0.46450 1.45941 1.57059 1.76516 1.82105 2.09213 2.14769 2.51370 2.54724 2.80154 3.15945 3.24349 3.38875 3.44665 3.55080 3.55676 3.60719 3.79703 3.85424 3.90551 3.91199 4.00413 4.07103 4.10039 4.13485 4.22554 4.26932 4.31747 4.35185 4.41021 4.46388 4.51151 4.52549 4.54245 4.60485 4.65331 4.68760 4.70208 4.72437 4.75476 4.82516 4.89525 4.99625 5.01970 5.10254 5.27482 5.34575 5.40180 5.43334 5.52854 5.57429 5.79242 6.03115 6.23333 6.42983 6.65451 7.00719 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.516 5.516 3 C 0.023 3.977 4 C 0.128 3.872 5 C -0.096 4.096 6 C -0.066 4.066 7 O -0.533 6.533 8 Si 0.735 3.265 9 C -0.054 4.054 10 C -0.134 4.134 11 C 0.564 3.436 12 O -0.526 6.526 13 N -0.712 5.712 14 C 0.122 3.878 15 H 0.119 0.881 16 C -0.165 4.165 17 C 0.054 3.946 18 H 0.098 0.902 19 O -0.299 6.299 20 C 0.128 3.872 21 C -0.153 4.153 22 C -0.080 4.080 23 C -0.158 4.158 24 C -0.080 4.080 25 C -0.211 4.211 26 C -0.135 4.135 27 C -0.072 4.072 28 C -0.152 4.152 29 H 0.073 0.927 30 H 0.035 0.965 31 H 0.080 0.920 32 H 0.082 0.918 33 H 0.074 0.926 34 H 0.035 0.965 35 H 0.082 0.918 36 H 0.364 0.636 37 H -0.248 1.248 38 H -0.249 1.249 39 H 0.141 0.859 40 H 0.400 0.600 41 H 0.106 0.894 42 H 0.078 0.922 43 H 0.131 0.869 44 H 0.130 0.870 45 H 0.124 0.876 46 H 0.124 0.876 47 H 0.126 0.874 48 H 0.085 0.915 49 H 0.112 0.888 50 H 0.129 0.871 51 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.373 4.600 0.890 6.409 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 N -0.237 5.237 3 C -0.124 4.124 4 C 0.033 3.967 5 C -0.098 4.098 6 C -0.176 4.176 7 O -0.338 6.338 8 Si 0.633 3.367 9 C -0.073 4.073 10 C -0.137 4.137 11 C 0.352 3.648 12 O -0.402 6.402 13 N -0.364 5.364 14 C 0.017 3.983 15 H 0.136 0.864 16 C -0.204 4.204 17 C -0.002 4.002 18 H 0.116 0.884 19 O -0.213 6.213 20 C 0.083 3.917 21 C -0.172 4.172 22 C -0.098 4.098 23 C -0.177 4.177 24 C -0.098 4.098 25 C -0.229 4.229 26 C -0.173 4.173 27 C -0.091 4.091 28 C -0.172 4.172 29 H 0.092 0.908 30 H 0.053 0.947 31 H 0.099 0.901 32 H 0.100 0.900 33 H 0.092 0.908 34 H 0.054 0.946 35 H 0.100 0.900 36 H 0.212 0.788 37 H -0.173 1.173 38 H -0.173 1.173 39 H 0.158 0.842 40 H 0.236 0.764 41 H 0.125 0.875 42 H 0.097 0.903 43 H 0.149 0.851 44 H 0.148 0.852 45 H 0.142 0.858 46 H 0.142 0.858 47 H 0.143 0.857 48 H 0.103 0.897 49 H 0.131 0.869 50 H 0.146 0.854 51 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -2.956 2.415 0.944 3.932 hybrid contribution -1.681 2.337 -1.599 3.293 sum -4.637 4.752 -0.655 6.672 Atomic orbital electron populations 1.22512 0.84891 1.03182 1.01530 1.59464 1.09303 1.14600 1.40298 1.22556 1.01090 0.86794 1.01911 1.18837 0.94959 0.93802 0.89058 1.20294 0.97827 0.95093 0.96543 1.25141 0.97651 1.05076 0.89698 1.86726 1.41449 1.21054 1.84586 0.93289 0.80721 0.73515 0.89133 1.21121 0.96734 0.98523 0.90881 1.19841 1.02298 0.98090 0.93477 1.18149 0.80062 0.83939 0.82675 1.90829 1.36938 1.27312 1.85157 1.45590 1.53066 1.32654 1.05070 1.21639 0.98453 0.93658 0.84563 0.86357 1.24036 1.00116 0.98276 0.98008 1.24229 0.97952 0.97848 0.80175 0.88429 1.86170 1.24131 1.83516 1.27459 1.19044 0.83360 0.95979 0.93297 1.20512 0.97653 1.06134 0.92858 1.21039 0.91702 0.97016 1.00008 1.21125 0.99552 1.03516 0.93473 1.20984 0.95824 0.97141 0.95901 1.21242 0.93332 1.08769 0.99573 1.23596 0.96048 1.01442 0.96198 1.21135 0.95228 0.93550 0.99192 1.21607 1.01764 1.01082 0.92776 0.90844 0.94676 0.90130 0.89964 0.90754 0.94608 0.89975 0.78773 1.17303 1.17341 0.84191 0.76428 0.87521 0.90292 0.85117 0.85190 0.85754 0.85777 0.85670 0.89664 0.86939 0.85366 0.85066 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.33 60.07 0.56 0.50 16 2 N -0.52 0.62 3.70 -186.85 -0.69 -0.07 16 3 C 0.02 -0.06 9.00 60.06 0.54 0.48 16 4 C 0.13 0.03 4.65 -83.86 -0.39 -0.36 16 5 C -0.10 -0.19 5.28 -104.48 -0.55 -0.74 16 6 C -0.07 -0.09 2.29 36.01 0.08 -0.01 16 7 O -0.53 -1.03 12.65 -35.23 -0.45 -1.48 16 8 Si 0.73 0.99 30.40 -169.99 -5.17 -4.18 16 9 C -0.05 -0.18 8.19 -39.23 -0.32 -0.50 16 10 C -0.13 -0.26 5.88 -104.95 -0.62 -0.87 16 11 C 0.56 1.64 7.76 -12.48 -0.10 1.54 16 12 O -0.53 -3.61 15.93 5.29 0.08 -3.53 16 13 N -0.71 0.38 5.21 -54.06 -0.28 0.10 16 14 C 0.12 -0.05 4.32 -67.12 -0.29 -0.34 16 15 H 0.12 0.13 7.46 -51.93 -0.39 -0.26 16 16 C -0.17 0.06 7.71 -25.92 -0.20 -0.14 16 17 C 0.05 -0.04 3.51 -25.91 -0.09 -0.14 16 18 H 0.10 -0.21 6.04 -51.93 -0.31 -0.53 16 19 O -0.30 -0.54 10.15 -19.42 -0.20 -0.73 16 20 C 0.13 0.26 6.68 -39.22 -0.26 0.00 16 21 C -0.15 -0.26 9.99 -39.43 -0.39 -0.65 16 22 C -0.08 -0.06 10.04 -39.60 -0.40 -0.45 16 23 C -0.16 -0.09 10.04 -39.56 -0.40 -0.49 16 24 C -0.08 -0.05 10.04 -39.61 -0.40 -0.44 16 25 C -0.21 -0.20 9.01 -39.43 -0.36 -0.56 16 26 C -0.13 0.24 7.66 -25.91 -0.20 0.04 16 27 C -0.07 0.06 9.53 -39.23 -0.37 -0.31 16 28 C -0.15 0.14 8.57 -39.45 -0.34 -0.20 16 29 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.03 -0.09 7.08 -51.93 -0.37 -0.46 16 31 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 32 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 33 H 0.07 -0.18 7.52 -51.93 -0.39 -0.57 16 34 H 0.04 -0.10 7.47 -51.93 -0.39 -0.49 16 35 H 0.08 0.03 7.78 -51.93 -0.40 -0.38 16 36 H 0.36 -0.03 7.56 45.56 0.34 0.31 16 37 H -0.25 -0.74 7.11 56.52 0.40 -0.34 16 38 H -0.25 -1.11 6.81 56.52 0.38 -0.72 16 39 H 0.14 0.67 4.50 -52.49 -0.24 0.43 16 40 H 0.40 -1.33 6.72 -40.82 -0.27 -1.60 16 41 H 0.11 0.00 8.14 -51.93 -0.42 -0.43 16 42 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 43 H 0.13 0.08 8.06 -52.49 -0.42 -0.34 16 44 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 45 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 46 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 47 H 0.13 -0.10 5.95 -52.49 -0.31 -0.41 16 48 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 49 H 0.11 -0.19 8.14 -51.93 -0.42 -0.62 16 50 H 0.13 -0.51 6.39 -52.49 -0.34 -0.85 16 51 H 0.13 -0.35 7.01 -52.49 -0.37 -0.72 16 LS Contribution 412.16 15.07 6.21 6.21 Total: 0.00 -7.78 412.16 -12.27 -20.05 By element: Atomic # 1 Polarization: -5.45 SS G_CDS: -7.30 Total: -12.74 kcal Atomic # 6 Polarization: 0.86 SS G_CDS: -4.49 Total: -3.63 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: -0.97 Total: 0.02 kcal Atomic # 8 Polarization: -5.18 SS G_CDS: -0.56 Total: -5.74 kcal Atomic # 14 Polarization: 0.99 SS G_CDS: -5.17 Total: -4.18 kcal Total LS contribution 6.21 Total: 6.21 kcal Total: -7.78 -12.27 -20.05 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_13422196.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.475 kcal (2) G-P(sol) polarization free energy of solvation -7.780 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.694 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.274 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.054 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.420 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds