Wall clock time and date at job start Sat Mar 6 2021 18:56:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46902 * 1 3 3 C 1.46900 * 110.99906 * 2 1 4 4 C 1.39042 * 110.99409 * 236.04955 * 2 1 3 5 5 C 1.39205 * 119.92835 * 239.99780 * 4 2 1 6 6 C 1.50700 * 119.96474 * 0.02562 * 5 4 2 7 7 O 1.42903 * 109.46796 * 284.99948 * 6 5 4 8 8 Si 1.86299 * 109.46852 * 165.00053 * 6 5 4 9 9 C 1.37631 * 120.06727 * 180.02562 * 5 4 2 10 10 C 1.39773 * 119.93120 * 359.97438 * 9 5 4 11 11 C 1.47522 * 120.06677 * 180.02562 * 10 9 5 12 12 O 1.21587 * 119.99957 * 359.97438 * 11 10 9 13 13 N 1.34774 * 119.99540 * 180.02562 * 11 10 9 14 14 C 1.46502 * 119.99629 * 179.97438 * 13 11 10 15 15 H 1.09001 * 112.85220 * 336.19938 * 14 13 11 16 16 C 1.53783 * 113.61289 * 107.50038 * 14 13 11 17 17 C 1.53784 * 87.08190 * 89.11875 * 16 14 13 18 18 H 1.09000 * 113.68719 * 270.87406 * 17 16 14 19 19 O 1.42895 * 113.61669 * 139.98030 * 17 16 14 20 20 C 1.35898 * 117.00303 * 104.62314 * 19 17 16 21 21 C 1.38728 * 120.06139 * 173.77818 * 20 19 17 22 22 C 1.38149 * 119.94638 * 179.74752 * 21 20 19 23 23 C 1.38265 * 120.05450 * 0.50537 * 22 21 20 24 24 C 1.38265 * 120.11062 * 359.77037 * 23 22 21 25 25 C 1.38144 * 120.05730 * 359.97438 * 24 23 22 26 26 C 1.53783 * 113.61746 * 204.99960 * 14 13 11 27 27 C 1.39824 * 119.86322 * 359.97438 * 10 9 5 28 28 C 1.37581 * 119.92796 * 359.75197 * 27 10 9 29 29 H 1.09000 * 109.47420 * 183.94767 * 1 2 3 30 30 H 1.09007 * 109.47360 * 63.94839 * 1 2 3 31 31 H 1.09007 * 109.47069 * 303.95387 * 1 2 3 32 32 H 1.09001 * 109.46789 * 60.00600 * 3 2 1 33 33 H 1.08998 * 109.46478 * 180.02562 * 3 2 1 34 34 H 1.09000 * 109.47585 * 300.00180 * 3 2 1 35 35 H 1.09002 * 109.47275 * 44.99342 * 6 5 4 36 36 H 0.96695 * 114.00505 * 59.99917 * 7 6 5 37 37 H 1.48497 * 109.99861 * 299.99427 * 8 6 5 38 38 H 1.48498 * 110.00130 * 61.31793 * 8 6 5 39 39 H 1.07999 * 120.02922 * 179.97438 * 9 5 4 40 40 H 0.97000 * 120.00884 * 359.97438 * 13 11 10 41 41 H 1.09006 * 113.61187 * 203.66377 * 16 14 13 42 42 H 1.08999 * 113.61690 * 334.56799 * 16 14 13 43 43 H 1.08000 * 120.02628 * 359.97438 * 21 20 19 44 44 H 1.07995 * 119.96870 * 180.23329 * 22 21 20 45 45 H 1.07995 * 119.94306 * 179.74952 * 23 22 21 46 46 H 1.07999 * 119.97529 * 180.02562 * 24 23 22 47 47 H 1.08001 * 120.02706 * 179.97438 * 25 24 23 48 48 H 1.08997 * 113.61347 * 25.42901 * 26 14 13 49 49 H 1.08990 * 113.61798 * 156.33649 * 26 14 13 50 50 H 1.08001 * 120.03064 * 179.97438 * 27 10 9 51 51 H 1.08002 * 119.96300 * 180.24713 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.9672 -0.7250 -1.0768 5 6 2.7792 -1.8330 -0.8519 6 6 3.1165 -2.2453 0.5578 7 8 4.0855 -1.3448 1.0984 8 14 3.8114 -3.9739 0.5497 9 6 3.2743 -2.5524 -1.9157 10 6 2.9605 -2.1696 -3.2229 11 6 3.4891 -2.9389 -4.3653 12 8 4.1988 -3.9066 -4.1703 13 7 3.1860 -2.5682 -5.6252 14 6 3.7114 -3.3318 -6.7597 15 1 4.6198 -3.8824 -6.5151 16 6 2.6481 -4.1811 -7.4759 17 6 2.3757 -2.9528 -8.3602 18 1 1.6197 -2.2803 -7.9548 19 8 2.1524 -3.2750 -9.7343 20 6 0.8699 -3.2203 -10.1804 21 6 0.5952 -3.3937 -11.5291 22 6 -0.7099 -3.3429 -11.9791 23 6 -1.7410 -3.1090 -11.0882 24 6 -1.4694 -2.9301 -9.7443 25 6 -0.1665 -2.9853 -9.2885 26 6 3.8178 -2.5129 -8.0571 27 6 2.1437 -1.0568 -3.4454 28 6 1.6473 -0.3452 -2.3777 29 1 -0.3634 -1.0252 0.0707 30 1 -0.3634 0.4514 -0.9233 31 1 -0.3633 0.5740 0.8525 32 1 1.6460 1.8947 0.8901 33 1 3.0850 1.3423 -0.0005 34 1 1.6460 1.8949 -0.8899 35 1 2.2148 -2.2190 1.1697 36 1 3.7910 -0.4245 1.1331 37 1 2.8132 -4.9199 -0.0103 38 1 5.0587 -4.0161 -0.2551 39 1 3.9046 -3.4117 -1.7406 40 1 2.6201 -1.7959 -5.7808 41 1 3.0617 -5.0291 -8.0218 42 1 1.8071 -4.4559 -6.8391 43 1 1.4007 -3.5720 -12.2261 44 1 -0.9245 -3.4816 -13.0284 45 1 -2.7603 -3.0656 -11.4426 46 1 -2.2765 -2.7479 -9.0503 47 1 0.0452 -2.8451 -8.2387 48 1 3.9211 -1.4409 -7.8895 49 1 4.5511 -2.9048 -8.7618 50 1 1.8999 -0.7584 -4.4543 51 1 1.0131 0.5121 -2.5488 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11987230_13422196.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:56:50 Heat of formation + Delta-G solvation = 5.528328 kcal Electronic energy + Delta-G solvation = -32886.869211 eV Core-core repulsion = 28526.828603 eV Total energy + Delta-G solvation = -4360.040607 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.177 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.11052 -41.52343 -40.66367 -39.42442 -37.76979 -37.58587 -37.36062 -34.54912 -32.79841 -31.98271 -31.40950 -30.70219 -28.59102 -27.02138 -26.97049 -26.91153 -25.66295 -23.78804 -23.42739 -23.13656 -22.90755 -21.47004 -20.72006 -19.60499 -19.15171 -18.11413 -17.99292 -17.53564 -17.31701 -16.83563 -16.76851 -16.46357 -16.43981 -16.16015 -16.00508 -15.81953 -15.57891 -15.28026 -15.10074 -15.07868 -14.73870 -14.42395 -14.14870 -14.08444 -13.92562 -13.81145 -13.61772 -13.54015 -13.25227 -13.19101 -13.07469 -12.75480 -12.70665 -12.67636 -12.50283 -12.36755 -11.99837 -11.63064 -11.47924 -11.42664 -11.37128 -11.03733 -10.45934 -10.26242 -10.00670 -9.93559 -9.65828 -9.21222 -4.93862 -0.57169 -0.01268 0.33731 0.43283 1.29698 1.43997 1.56227 1.75165 1.90598 2.16143 2.44622 2.66272 2.78276 3.20767 3.27943 3.38119 3.42642 3.53603 3.61064 3.65298 3.82025 3.87125 3.94422 3.96026 4.02061 4.08862 4.16616 4.26392 4.34661 4.36419 4.40937 4.44196 4.49338 4.53260 4.57125 4.57750 4.58912 4.65389 4.68416 4.70528 4.78702 4.84613 4.87801 4.96860 4.97354 4.98442 5.03420 5.08923 5.24698 5.33136 5.38937 5.43656 5.56766 5.74499 5.81513 6.12682 6.21305 6.41937 6.64468 6.89598 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 N -0.524 5.524 3 C 0.022 3.978 4 C 0.134 3.866 5 C -0.112 4.112 6 C -0.063 4.063 7 O -0.544 6.544 8 Si 0.794 3.206 9 C -0.081 4.081 10 C -0.149 4.149 11 C 0.561 3.439 12 O -0.579 6.579 13 N -0.691 5.691 14 C 0.119 3.881 15 H 0.098 0.902 16 C -0.165 4.165 17 C 0.056 3.944 18 H 0.117 0.883 19 O -0.314 6.314 20 C 0.110 3.890 21 C -0.172 4.172 22 C -0.087 4.087 23 C -0.168 4.168 24 C -0.088 4.088 25 C -0.217 4.217 26 C -0.123 4.123 27 C -0.057 4.057 28 C -0.148 4.148 29 H 0.065 0.935 30 H 0.044 0.956 31 H 0.091 0.909 32 H 0.093 0.907 33 H 0.070 0.930 34 H 0.043 0.957 35 H 0.097 0.903 36 H 0.374 0.626 37 H -0.275 1.275 38 H -0.301 1.301 39 H 0.112 0.888 40 H 0.417 0.583 41 H 0.098 0.902 42 H 0.075 0.925 43 H 0.132 0.868 44 H 0.146 0.854 45 H 0.141 0.859 46 H 0.144 0.856 47 H 0.141 0.859 48 H 0.104 0.896 49 H 0.111 0.889 50 H 0.165 0.835 51 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.598 7.289 0.671 9.854 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 N -0.245 5.245 3 C -0.123 4.123 4 C 0.039 3.961 5 C -0.114 4.114 6 C -0.173 4.173 7 O -0.351 6.351 8 Si 0.699 3.301 9 C -0.100 4.100 10 C -0.153 4.153 11 C 0.350 3.650 12 O -0.460 6.460 13 N -0.343 5.343 14 C 0.014 3.986 15 H 0.116 0.884 16 C -0.204 4.204 17 C 0.000 4.000 18 H 0.134 0.866 19 O -0.228 6.228 20 C 0.065 3.935 21 C -0.191 4.191 22 C -0.105 4.105 23 C -0.186 4.186 24 C -0.106 4.106 25 C -0.236 4.236 26 C -0.161 4.161 27 C -0.076 4.076 28 C -0.168 4.168 29 H 0.084 0.916 30 H 0.063 0.937 31 H 0.109 0.891 32 H 0.112 0.888 33 H 0.088 0.912 34 H 0.062 0.938 35 H 0.115 0.885 36 H 0.223 0.777 37 H -0.201 1.201 38 H -0.230 1.230 39 H 0.129 0.871 40 H 0.256 0.744 41 H 0.117 0.883 42 H 0.094 0.906 43 H 0.150 0.850 44 H 0.164 0.836 45 H 0.159 0.841 46 H 0.161 0.839 47 H 0.159 0.841 48 H 0.122 0.878 49 H 0.130 0.870 50 H 0.183 0.817 51 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -5.216 5.144 0.722 7.362 hybrid contribution -0.997 1.500 -1.594 2.405 sum -6.213 6.643 -0.872 9.138 Atomic orbital electron populations 1.22558 0.84018 1.03047 1.02546 1.59451 1.10027 1.15311 1.39736 1.22606 1.00889 0.85980 1.02866 1.18947 0.93900 0.92987 0.90237 1.20335 0.98893 0.96084 0.96079 1.25037 0.97894 1.04344 0.90009 1.86688 1.41938 1.21831 1.84609 0.92809 0.76734 0.73128 0.87424 1.21065 0.97770 0.98662 0.92490 1.19836 1.03667 0.99392 0.92357 1.18423 0.79423 0.83361 0.83819 1.90802 1.39510 1.29708 1.85941 1.45408 1.52336 1.32674 1.03932 1.21590 0.97790 0.94214 0.85036 0.88408 1.24001 0.99848 0.98505 0.98074 1.24360 0.98886 0.97571 0.79204 0.86554 1.86149 1.24295 1.83791 1.28592 1.19269 0.83738 0.96704 0.93756 1.20725 0.98322 1.06887 0.93163 1.21307 0.91434 0.96661 1.01068 1.21432 1.00359 1.03117 0.93661 1.21306 0.96263 0.96635 0.96386 1.21463 0.93306 1.08537 1.00247 1.23535 0.95537 1.02258 0.94733 1.21471 0.93232 0.91702 1.01155 1.21927 1.01350 1.01458 0.92019 0.91618 0.93697 0.89051 0.88843 0.91167 0.93808 0.88501 0.77660 1.20126 1.22975 0.87095 0.74421 0.88344 0.90640 0.85014 0.83580 0.84111 0.83853 0.84140 0.87768 0.87029 0.81741 0.82312 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.16 9.33 127.69 1.19 1.03 16 2 N -0.52 2.09 3.70 -745.07 -2.76 -0.66 16 3 C 0.02 -0.16 9.00 127.69 1.15 0.99 16 4 C 0.13 -0.07 4.65 38.47 0.18 0.11 16 5 C -0.11 -0.54 5.28 -19.78 -0.10 -0.64 16 6 C -0.06 -0.23 2.29 71.24 0.16 -0.07 16 7 O -0.54 -2.43 12.65 -148.98 -1.89 -4.32 16 8 Si 0.79 4.38 30.40 68.60 2.09 6.47 16 9 C -0.08 -0.72 8.19 22.50 0.18 -0.54 16 10 C -0.15 -0.70 5.88 -20.07 -0.12 -0.82 16 11 C 0.56 4.16 7.76 86.69 0.67 4.84 16 12 O -0.58 -10.03 15.93 -3.99 -0.06 -10.10 16 13 N -0.69 0.74 5.21 -443.21 -2.31 -1.57 16 14 C 0.12 0.00 4.32 45.52 0.20 0.19 16 15 H 0.10 0.45 7.46 -2.39 -0.02 0.44 16 16 C -0.17 -0.01 7.71 31.12 0.24 0.23 16 17 C 0.06 -0.12 3.51 31.12 0.11 -0.01 16 18 H 0.12 -0.72 6.04 -2.39 -0.01 -0.73 16 19 O -0.31 -1.18 10.15 -92.40 -0.94 -2.12 16 20 C 0.11 0.46 6.68 22.51 0.15 0.61 16 21 C -0.17 -0.65 9.99 22.37 0.22 -0.43 16 22 C -0.09 -0.10 10.04 22.25 0.22 0.12 16 23 C -0.17 -0.04 10.04 22.28 0.22 0.18 16 24 C -0.09 0.00 10.04 22.25 0.22 0.23 16 25 C -0.22 -0.24 9.01 22.37 0.20 -0.04 16 26 C -0.12 0.48 7.66 31.12 0.24 0.72 16 27 C -0.06 0.20 9.53 22.50 0.21 0.42 16 28 C -0.15 0.61 8.57 22.36 0.19 0.81 16 29 H 0.06 -0.31 8.14 -2.39 -0.02 -0.33 16 30 H 0.04 -0.37 7.08 -2.38 -0.02 -0.39 16 31 H 0.09 -0.78 8.14 -2.38 -0.02 -0.80 16 32 H 0.09 -0.86 8.14 -2.39 -0.02 -0.88 16 33 H 0.07 -0.44 7.52 -2.39 -0.02 -0.45 16 34 H 0.04 -0.37 7.47 -2.39 -0.02 -0.39 16 35 H 0.10 0.06 7.78 -2.39 -0.02 0.04 16 36 H 0.37 -0.11 7.56 -74.06 -0.56 -0.67 16 37 H -0.27 -2.57 7.11 99.48 0.71 -1.86 16 38 H -0.30 -4.24 6.81 99.48 0.68 -3.57 16 39 H 0.11 1.58 4.50 -2.91 -0.01 1.56 16 40 H 0.42 -3.53 6.72 -92.71 -0.62 -4.15 16 41 H 0.10 0.17 8.14 -2.38 -0.02 0.15 16 42 H 0.07 0.06 8.14 -2.39 -0.02 0.04 16 43 H 0.13 0.30 8.06 -2.91 -0.02 0.28 16 44 H 0.15 -0.46 8.06 -2.91 -0.02 -0.49 16 45 H 0.14 -0.53 8.06 -2.91 -0.02 -0.55 16 46 H 0.14 -0.66 8.06 -2.91 -0.02 -0.68 16 47 H 0.14 -0.44 5.95 -2.91 -0.02 -0.45 16 48 H 0.10 -0.77 8.14 -2.39 -0.02 -0.79 16 49 H 0.11 -0.37 8.14 -2.39 -0.02 -0.39 16 50 H 0.17 -1.91 6.39 -2.91 -0.02 -1.93 16 51 H 0.16 -1.49 7.01 -2.91 -0.02 -1.51 16 Total: 0.00 -22.56 412.16 -0.32 -22.88 By element: Atomic # 1 Polarization: -18.32 SS G_CDS: -0.20 Total: -18.52 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: 5.75 Total: 7.94 kcal Atomic # 7 Polarization: 2.84 SS G_CDS: -5.07 Total: -2.23 kcal Atomic # 8 Polarization: -13.65 SS G_CDS: -2.89 Total: -16.53 kcal Atomic # 14 Polarization: 4.38 SS G_CDS: 2.09 Total: 6.47 kcal Total: -22.56 -0.32 -22.88 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_13422196.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.408 kcal (2) G-P(sol) polarization free energy of solvation -22.563 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.845 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.317 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.880 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.528 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds