Wall clock time and date at job start Sat Mar 6 2021 18:56:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86303 * 109.47275 * 2 1 4 4 C 1.50703 * 109.47086 * 239.99843 * 2 1 3 5 5 C 1.32694 * 124.68660 * 299.72591 * 4 2 1 6 6 C 1.44506 * 113.09872 * 179.82151 * 5 4 2 7 7 C 1.47042 * 123.49094 * 180.22030 * 6 5 4 8 8 O 1.21656 * 119.99872 * 180.25010 * 7 6 5 9 9 N 1.34777 * 120.00249 * 0.23604 * 7 6 5 10 10 C 1.46497 * 120.00290 * 180.02562 * 9 7 6 11 11 H 1.09010 * 112.84684 * 23.80883 * 10 9 7 12 12 C 1.53779 * 113.61513 * 155.00373 * 10 9 7 13 13 C 1.53774 * 87.08156 * 139.98442 * 12 10 9 14 14 H 1.08998 * 113.61517 * 220.01802 * 13 12 10 15 15 O 1.42906 * 113.61735 * 89.19857 * 13 12 10 16 16 C 1.35895 * 117.00163 * 156.68249 * 15 13 12 17 17 C 1.38735 * 120.05876 * 5.43684 * 16 15 13 18 18 C 1.38142 * 119.94834 * 179.69668 * 17 16 15 19 19 C 1.38271 * 120.05046 * 0.59839 * 18 17 16 20 20 C 1.38267 * 120.11373 * 359.67825 * 19 18 17 21 21 C 1.38146 * 120.05402 * 0.02562 * 20 19 18 22 22 C 1.53778 * 113.61704 * 252.50629 * 10 9 7 23 23 C 1.36220 * 113.01542 * 0.45744 * 6 5 4 24 24 Cl 1.73604 * 124.60643 * 179.75583 * 23 6 5 25 25 S 1.70451 * 110.79052 * 359.75862 * 23 6 5 26 26 H 0.96704 * 113.99873 * 60.00109 * 1 2 3 27 27 H 1.09004 * 109.46719 * 119.99997 * 2 1 3 28 28 H 1.48495 * 109.99700 * 298.68265 * 3 2 1 29 29 H 1.48503 * 109.99688 * 59.99832 * 3 2 1 30 30 H 1.07997 * 123.44500 * 359.97438 * 5 4 2 31 31 H 0.96997 * 119.99926 * 0.02562 * 9 7 6 32 32 H 1.09002 * 113.61024 * 254.53291 * 12 10 9 33 33 H 1.08998 * 113.61142 * 25.35133 * 12 10 9 34 34 H 1.08007 * 120.02332 * 359.97438 * 17 16 15 35 35 H 1.07995 * 119.97573 * 180.27999 * 18 17 16 36 36 H 1.08005 * 119.94079 * 179.69778 * 19 18 17 37 37 H 1.07995 * 119.97299 * 180.02562 * 20 19 18 38 38 H 1.07999 * 120.02662 * 180.02562 * 21 20 19 39 39 H 1.08999 * 113.61337 * 334.56169 * 22 10 9 40 40 H 1.08994 * 113.61651 * 105.47181 * 22 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 1.6730 -1.9772 -1.5294 6 6 2.2771 -2.4011 -2.7718 7 6 2.1342 -3.7570 -3.3224 8 8 2.6748 -4.0470 -4.3730 9 7 1.4046 -4.6787 -2.6631 10 6 1.2627 -6.0298 -3.2114 11 1 2.0760 -6.3008 -3.8848 12 6 0.9623 -7.0981 -2.1469 13 6 -0.0145 -7.7193 -3.1591 14 1 -0.9401 -8.0781 -2.7090 15 8 0.5920 -8.6825 -4.0232 16 6 -0.2277 -9.6079 -4.5875 17 6 -1.6005 -9.5226 -4.4066 18 6 -2.4322 -10.4610 -4.9864 19 6 -1.8964 -11.4917 -5.7363 20 6 -0.5281 -11.5823 -5.9134 21 6 0.3073 -10.6429 -5.3407 22 6 -0.1352 -6.3189 -3.7831 23 6 2.9970 -1.4159 -3.3774 24 17 3.8513 -1.5989 -4.8775 25 16 2.9451 0.0211 -2.4621 26 1 -0.3933 0.4417 -0.7651 27 1 1.7923 -0.5139 0.8900 28 1 1.5879 2.4585 -1.2242 29 1 1.5615 2.4679 1.2085 30 1 1.0707 -2.6243 -0.9090 31 1 0.9735 -4.4475 -1.8256 32 1 1.8155 -7.7359 -1.9156 33 1 0.4761 -6.7017 -1.2556 34 1 -2.0191 -8.7206 -3.8165 35 1 -3.5012 -10.3924 -4.8496 36 1 -2.5479 -12.2272 -6.1848 37 1 -0.1121 -12.3880 -6.4999 38 1 1.3760 -10.7138 -5.4796 39 1 -0.9229 -5.7098 -3.3396 40 1 -0.1682 -6.3277 -4.8725 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_13431040.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:56:58 Heat of formation + Delta-G solvation = -8.003820 kcal Electronic energy + Delta-G solvation = -26754.578782 eV Core-core repulsion = 22655.342599 eV Total energy + Delta-G solvation = -4099.236183 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.053 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -41.76277 -40.84527 -39.58156 -38.89806 -37.94414 -37.29484 -37.01392 -34.18137 -31.92020 -31.72267 -30.61996 -27.28038 -26.96007 -26.81262 -24.98434 -23.42196 -23.16032 -22.26265 -21.04591 -20.53953 -19.45664 -19.30002 -18.16416 -17.85226 -17.24054 -17.05389 -16.70505 -16.64849 -16.28304 -16.05773 -15.86256 -15.67824 -15.36795 -15.25319 -14.80346 -14.40847 -14.38853 -14.35304 -14.04059 -13.88707 -13.64204 -13.49721 -13.27899 -13.01509 -12.58490 -12.54870 -12.49854 -12.48898 -12.07495 -12.01657 -11.90735 -11.50459 -11.37368 -11.02250 -10.70560 -10.12739 -9.92533 -9.91335 -9.71683 -9.12709 -5.24435 -0.61899 -0.22372 0.40944 0.41710 0.52332 0.65905 1.01194 1.08206 1.38360 1.74527 2.04985 2.16415 2.24843 2.86272 3.04450 3.27309 3.32004 3.35455 3.66398 3.77652 3.81190 3.84033 3.90692 3.98929 4.13229 4.24919 4.29410 4.35576 4.43585 4.47676 4.54495 4.63520 4.65721 4.69669 4.78348 4.86180 4.89418 5.01164 5.09328 5.37579 5.44679 5.49963 5.63668 5.85516 6.11422 6.43155 6.47464 7.19770 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.522 6.522 2 C -0.031 4.031 3 Si 0.647 3.353 4 C -0.234 4.234 5 C -0.071 4.071 6 C -0.160 4.160 7 C 0.577 3.423 8 O -0.515 6.515 9 N -0.716 5.716 10 C 0.132 3.868 11 H 0.124 0.876 12 C -0.141 4.141 13 C 0.059 3.941 14 H 0.095 0.905 15 O -0.292 6.292 16 C 0.129 3.871 17 C -0.209 4.209 18 C -0.081 4.081 19 C -0.158 4.158 20 C -0.080 4.080 21 C -0.152 4.152 22 C -0.170 4.170 23 C -0.114 4.114 24 Cl 0.027 6.973 25 S 0.239 5.761 26 H 0.379 0.621 27 H 0.132 0.868 28 H -0.236 1.236 29 H -0.230 1.230 30 H 0.157 0.843 31 H 0.400 0.600 32 H 0.090 0.910 33 H 0.105 0.895 34 H 0.129 0.871 35 H 0.125 0.875 36 H 0.124 0.876 37 H 0.130 0.870 38 H 0.131 0.869 39 H 0.098 0.902 40 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.563 1.458 4.534 5.013 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.328 6.328 2 C -0.143 4.143 3 Si 0.545 3.455 4 C -0.352 4.352 5 C -0.100 4.100 6 C -0.179 4.179 7 C 0.362 3.638 8 O -0.391 6.391 9 N -0.367 5.367 10 C 0.028 3.972 11 H 0.142 0.858 12 C -0.179 4.179 13 C 0.001 3.999 14 H 0.113 0.887 15 O -0.206 6.206 16 C 0.084 3.916 17 C -0.228 4.228 18 C -0.099 4.099 19 C -0.176 4.176 20 C -0.098 4.098 21 C -0.170 4.170 22 C -0.209 4.209 23 C -0.261 4.261 24 Cl 0.056 6.944 25 S 0.503 5.497 26 H 0.228 0.772 27 H 0.150 0.850 28 H -0.160 1.160 29 H -0.153 1.153 30 H 0.174 0.826 31 H 0.235 0.765 32 H 0.109 0.891 33 H 0.123 0.877 34 H 0.147 0.853 35 H 0.143 0.857 36 H 0.142 0.858 37 H 0.148 0.852 38 H 0.149 0.851 39 H 0.117 0.883 40 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -0.367 3.239 3.965 5.132 hybrid contribution -2.010 -1.503 -0.071 2.510 sum -2.376 1.736 3.893 4.881 Atomic orbital electron populations 1.86637 1.16943 1.79885 1.49383 1.24394 0.83979 1.10084 0.95877 0.95237 0.91630 0.75099 0.83570 1.24751 1.08031 0.99189 1.03183 1.20987 0.99407 0.95012 0.94622 1.20235 1.04760 0.95488 0.97408 1.17442 0.78642 0.83546 0.84176 1.90890 1.46458 1.79949 1.21825 1.45802 1.52929 1.11569 1.26406 1.22542 0.98250 0.80215 0.96233 0.85828 1.23587 1.00304 0.96981 0.96986 1.23124 0.97365 0.87849 0.91547 0.88704 1.86087 1.35260 1.39812 1.59421 1.19023 0.89216 0.89346 0.94025 1.21276 0.92579 1.02891 1.06009 1.20991 0.99673 0.93628 0.95584 1.21133 0.95372 0.99613 1.01519 1.21027 0.93359 0.97750 0.97694 1.20496 1.00872 0.94539 1.01124 1.24028 0.98444 0.95549 1.02900 1.25560 1.02879 1.00889 0.96804 1.98446 1.73178 1.97041 1.25689 1.83367 1.46362 1.08463 1.11483 0.77227 0.85039 1.16014 1.15256 0.82566 0.76454 0.89130 0.87718 0.85327 0.85720 0.85777 0.85207 0.85109 0.88318 0.89799 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.78 12.85 -35.23 -0.45 0.33 16 2 C -0.03 0.08 2.94 36.01 0.11 0.19 16 3 Si 0.65 -1.72 30.91 -169.99 -5.25 -6.98 16 4 C -0.23 0.44 5.68 -36.19 -0.21 0.23 16 5 C -0.07 0.10 9.71 -39.00 -0.38 -0.27 16 6 C -0.16 -0.19 5.98 -104.59 -0.63 -0.81 16 7 C 0.58 1.54 7.79 -12.69 -0.10 1.44 16 8 O -0.52 -3.27 14.51 5.23 0.08 -3.19 16 9 N -0.72 0.34 5.33 -54.21 -0.29 0.06 16 10 C 0.13 0.00 4.18 -67.12 -0.28 -0.28 16 11 H 0.12 0.33 7.46 -51.92 -0.39 -0.06 16 12 C -0.14 0.27 7.66 -25.92 -0.20 0.07 16 13 C 0.06 -0.04 3.75 -25.92 -0.10 -0.13 16 14 H 0.10 -0.18 5.95 -51.93 -0.31 -0.49 16 15 O -0.29 -0.66 10.07 -19.41 -0.20 -0.85 16 16 C 0.13 0.31 6.68 -39.22 -0.26 0.05 16 17 C -0.21 -0.26 9.02 -39.43 -0.36 -0.62 16 18 C -0.08 -0.07 10.04 -39.60 -0.40 -0.47 16 19 C -0.16 -0.14 10.04 -39.56 -0.40 -0.54 16 20 C -0.08 -0.09 10.04 -39.60 -0.40 -0.49 16 21 C -0.15 -0.32 9.99 -39.43 -0.39 -0.72 16 22 C -0.17 0.10 7.71 -25.92 -0.20 -0.10 16 23 C -0.11 -0.19 6.87 30.01 0.21 0.02 16 24 Cl 0.03 0.09 27.20 -51.86 -1.41 -1.32 16 25 S 0.24 -0.26 20.17 -107.50 -2.17 -2.43 16 26 H 0.38 -1.54 8.70 45.56 0.40 -1.15 16 27 H 0.13 -0.51 7.96 -51.93 -0.41 -0.92 16 28 H -0.24 0.22 7.11 56.52 0.40 0.62 16 29 H -0.23 -0.03 7.11 56.52 0.40 0.37 16 30 H 0.16 -0.57 7.10 -52.49 -0.37 -0.94 16 31 H 0.40 -1.35 7.27 -40.82 -0.30 -1.64 16 32 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.10 -0.44 8.12 -51.93 -0.42 -0.86 16 34 H 0.13 -0.08 5.91 -52.48 -0.31 -0.39 16 35 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 36 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 37 H 0.13 -0.12 8.06 -52.49 -0.42 -0.55 16 38 H 0.13 0.16 8.06 -52.49 -0.42 -0.27 16 39 H 0.10 -0.21 8.14 -51.93 -0.42 -0.63 16 40 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 LS Contribution 368.46 15.07 5.55 5.55 Total: 0.00 -7.73 368.46 -12.39 -20.12 By element: Atomic # 1 Polarization: -4.59 SS G_CDS: -4.27 Total: -8.86 kcal Atomic # 6 Polarization: 1.55 SS G_CDS: -3.98 Total: -2.42 kcal Atomic # 7 Polarization: 0.34 SS G_CDS: -0.29 Total: 0.06 kcal Atomic # 8 Polarization: -3.14 SS G_CDS: -0.57 Total: -3.72 kcal Atomic # 14 Polarization: -1.72 SS G_CDS: -5.25 Total: -6.98 kcal Atomic # 16 Polarization: -0.26 SS G_CDS: -2.17 Total: -2.43 kcal Atomic # 17 Polarization: 0.09 SS G_CDS: -1.41 Total: -1.32 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -7.73 -12.39 -20.12 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_13431040.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.119 kcal (2) G-P(sol) polarization free energy of solvation -7.733 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.386 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.389 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.123 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.004 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds