Wall clock time and date at job start Sat Mar 6 2021 18:57:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86303 * 109.46718 * 2 1 4 4 C 1.50695 * 109.47522 * 119.99758 * 2 1 3 5 5 C 1.31118 * 118.54900 * 249.73555 * 4 2 1 6 6 N 1.38921 * 121.84795 * 180.68151 * 5 4 2 7 7 C 1.47037 * 118.88666 * 346.68637 * 6 5 4 8 8 C 1.50696 * 109.82270 * 163.20116 * 7 6 5 9 9 O 1.21289 * 119.99834 * 341.79342 * 8 7 6 10 10 N 1.34768 * 120.00278 * 161.79389 * 8 7 6 11 11 C 1.46501 * 120.00700 * 180.02562 * 10 8 7 12 12 H 1.09002 * 112.84230 * 23.79906 * 11 10 8 13 13 C 1.53777 * 113.61898 * 154.99592 * 11 10 8 14 14 C 1.53786 * 87.07858 * 139.98038 * 13 11 10 15 15 H 1.08991 * 113.61418 * 219.93497 * 14 13 11 16 16 O 1.42905 * 113.60875 * 89.12007 * 14 13 11 17 17 C 1.35906 * 116.99863 * 156.68431 * 16 14 13 18 18 C 1.38729 * 120.05132 * 5.43113 * 17 16 14 19 19 C 1.38148 * 119.93806 * 179.70126 * 18 17 16 20 20 C 1.38265 * 120.05878 * 0.59683 * 19 18 17 21 21 C 1.38271 * 120.10753 * 359.67664 * 20 19 18 22 22 C 1.38141 * 120.05794 * 0.02562 * 21 20 19 23 23 C 1.53778 * 87.08393 * 334.57126 * 14 13 11 24 24 C 1.53542 * 107.65206 * 43.66322 * 7 6 5 25 25 C 1.50206 * 118.54665 * 70.00150 * 4 2 1 26 26 H 0.96698 * 114.00220 * 60.00149 * 1 2 3 27 27 H 1.09001 * 109.47076 * 240.00349 * 2 1 3 28 28 H 1.48497 * 110.00108 * 59.99975 * 3 2 1 29 29 H 1.48502 * 110.00013 * 181.31982 * 3 2 1 30 30 H 1.07999 * 119.07364 * 0.65990 * 5 4 2 31 31 H 0.97005 * 120.55782 * 166.70929 * 6 5 4 32 32 H 1.08995 * 109.82119 * 284.12864 * 7 6 5 33 33 H 0.97002 * 119.99798 * 359.97438 * 10 8 7 34 34 H 1.08994 * 113.61640 * 254.53259 * 13 11 10 35 35 H 1.09001 * 113.61358 * 25.35280 * 13 11 10 36 36 H 1.08001 * 120.03127 * 359.97438 * 18 17 16 37 37 H 1.08000 * 119.97113 * 180.27653 * 19 18 17 38 38 H 1.08001 * 119.94975 * 179.70344 * 20 19 18 39 39 H 1.07999 * 119.97112 * 180.02562 * 21 20 19 40 40 H 1.07991 * 120.03052 * 179.97438 * 22 21 20 41 41 H 1.09000 * 113.60911 * 270.88291 * 23 14 13 42 42 H 1.08993 * 113.61719 * 139.98019 * 23 14 13 43 43 H 1.09011 * 109.61682 * 179.33049 * 24 7 6 44 44 H 1.08998 * 109.77610 * 58.86804 * 24 7 6 45 45 H 1.09006 * 109.33125 * 279.93530 * 25 4 2 46 46 H 1.09006 * 109.32497 * 39.58131 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9315 -0.7103 1.2304 5 6 2.5165 -0.0035 2.1671 6 7 3.0174 -0.5896 3.3227 7 6 2.6343 -1.9730 3.6409 8 6 3.5787 -2.5412 4.6687 9 8 4.6558 -2.0168 4.8581 10 7 3.2265 -3.6320 5.3774 11 6 4.1442 -4.1841 6.3770 12 1 4.8535 -3.4469 6.7532 13 6 3.4393 -4.9827 7.4861 14 6 4.6042 -5.9829 7.3976 15 1 4.2928 -7.0241 7.4794 16 8 5.7003 -5.6624 8.2567 17 6 6.5222 -6.6835 8.6154 18 6 6.3468 -7.9436 8.0621 19 6 7.1875 -8.9784 8.4236 20 6 8.1952 -8.7623 9.3454 21 6 8.3684 -7.5086 9.9025 22 6 7.5343 -6.4690 9.5396 23 6 4.7985 -5.5081 5.9479 24 6 2.7227 -2.7906 2.3443 25 6 1.7453 -2.1977 1.3269 26 1 -0.3933 0.4417 -0.7650 27 1 1.7924 -0.5138 -0.8900 28 1 1.5614 2.4679 1.2085 29 1 3.5345 1.7705 -0.0321 30 1 2.6119 1.0643 2.0363 31 1 3.6096 -0.0943 3.9100 32 1 1.6138 -1.9954 4.0231 33 1 2.3649 -4.0512 5.2262 34 1 3.3880 -4.4554 8.4386 35 1 2.4797 -5.4001 7.1811 36 1 5.5566 -8.1143 7.3460 37 1 7.0543 -9.9585 7.9899 38 1 8.8484 -9.5737 9.6304 39 1 9.1565 -7.3421 10.6219 40 1 7.6697 -5.4902 9.9753 41 1 4.2110 -6.0702 5.2220 42 1 5.8442 -5.4048 5.6587 43 1 2.4558 -3.8279 2.5467 44 1 3.7369 -2.7444 1.9476 45 1 0.7237 -2.4140 1.6395 46 1 1.9270 -2.6480 0.3510 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_15413834.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:57:11 Heat of formation + Delta-G solvation = -17.451681 kcal Electronic energy + Delta-G solvation = -27485.348779 eV Core-core repulsion = 23536.301584 eV Total energy + Delta-G solvation = -3949.047195 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.162 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.89404 -41.16756 -39.89361 -39.07400 -37.48781 -37.19973 -34.53556 -33.32427 -32.92030 -31.94492 -30.66103 -27.91201 -27.03198 -26.00520 -25.29721 -23.81951 -23.42727 -23.19758 -21.79649 -20.91695 -19.48852 -19.12409 -19.00823 -18.22075 -17.67192 -17.47963 -17.14606 -16.74026 -16.56094 -16.01529 -15.95468 -15.62812 -15.39561 -15.36943 -15.06311 -14.66177 -14.49326 -14.38726 -14.18851 -13.97300 -13.77762 -13.68689 -13.65217 -13.51417 -13.31338 -12.88384 -12.61634 -12.52865 -12.35741 -12.13335 -11.83573 -11.71837 -11.57082 -11.44835 -11.34988 -10.83545 -10.22696 -10.07905 -9.96218 -9.17118 -8.49975 -4.90551 0.37913 0.48388 1.28095 1.39581 1.43296 1.69528 1.80687 1.99612 2.02075 2.55825 2.82281 3.18812 3.27842 3.42409 3.56532 3.62402 3.68594 3.75295 3.85228 3.85590 3.93561 3.98304 4.08435 4.17241 4.25615 4.31240 4.36495 4.43707 4.48426 4.54397 4.58567 4.59479 4.63925 4.70275 4.71139 4.81709 4.90170 4.93710 5.05083 5.16603 5.23411 5.30687 5.34804 5.46179 5.51328 5.60091 5.81374 6.16740 6.33678 6.42579 6.75079 6.80744 7.02275 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.045 4.045 3 Si 0.665 3.335 4 C -0.232 4.232 5 C 0.135 3.865 6 N -0.732 5.732 7 C 0.136 3.864 8 C 0.514 3.486 9 O -0.528 6.528 10 N -0.717 5.717 11 C 0.129 3.871 12 H 0.122 0.878 13 C -0.140 4.140 14 C 0.059 3.941 15 H 0.096 0.904 16 O -0.293 6.293 17 C 0.128 3.872 18 C -0.209 4.209 19 C -0.080 4.080 20 C -0.158 4.158 21 C -0.080 4.080 22 C -0.152 4.152 23 C -0.170 4.170 24 C -0.127 4.127 25 C -0.051 4.051 26 H 0.376 0.624 27 H 0.065 0.935 28 H -0.254 1.254 29 H -0.257 1.257 30 H 0.126 0.874 31 H 0.409 0.591 32 H 0.092 0.908 33 H 0.404 0.596 34 H 0.090 0.910 35 H 0.106 0.894 36 H 0.129 0.871 37 H 0.125 0.875 38 H 0.125 0.875 39 H 0.130 0.870 40 H 0.131 0.869 41 H 0.100 0.900 42 H 0.083 0.917 43 H 0.080 0.920 44 H 0.076 0.924 45 H 0.072 0.928 46 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.538 -3.033 -2.053 5.093 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.157 4.157 3 Si 0.568 3.432 4 C -0.242 4.242 5 C 0.015 3.985 6 N -0.365 5.365 7 C 0.027 3.973 8 C 0.299 3.701 9 O -0.403 6.403 10 N -0.368 5.368 11 C 0.025 3.975 12 H 0.140 0.860 13 C -0.178 4.178 14 C 0.001 3.999 15 H 0.114 0.886 16 O -0.207 6.207 17 C 0.083 3.917 18 C -0.227 4.227 19 C -0.099 4.099 20 C -0.176 4.176 21 C -0.098 4.098 22 C -0.170 4.170 23 C -0.209 4.209 24 C -0.166 4.166 25 C -0.089 4.089 26 H 0.223 0.777 27 H 0.083 0.917 28 H -0.180 1.180 29 H -0.182 1.182 30 H 0.142 0.858 31 H 0.246 0.754 32 H 0.110 0.890 33 H 0.239 0.761 34 H 0.109 0.891 35 H 0.124 0.876 36 H 0.147 0.853 37 H 0.143 0.857 38 H 0.143 0.857 39 H 0.148 0.852 40 H 0.149 0.851 41 H 0.118 0.882 42 H 0.102 0.898 43 H 0.099 0.901 44 H 0.095 0.905 45 H 0.090 0.910 46 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -2.213 -2.260 -0.855 3.277 hybrid contribution -0.161 -0.715 0.194 0.758 sum -2.374 -2.975 -0.661 3.863 Atomic orbital electron populations 1.86515 1.18191 1.81634 1.49291 1.24431 0.84937 1.08645 0.97709 0.95542 0.80995 0.79270 0.87440 1.20066 1.12063 0.95694 0.96416 1.20249 0.96288 0.95560 0.86408 1.44224 1.54666 1.12473 1.25137 1.21017 0.97346 0.84257 0.94694 1.20639 0.87650 0.80320 0.81446 1.90747 1.23121 1.59815 1.66613 1.45922 1.21183 1.30091 1.39619 1.22570 0.92456 0.94457 0.88066 0.86003 1.23588 0.97084 0.96808 1.00347 1.23123 0.86838 0.99681 0.90229 0.88602 1.86087 1.37915 1.33218 1.63460 1.19022 0.91327 0.86875 0.94457 1.21273 1.03486 0.93077 1.04900 1.20997 0.94096 0.98521 0.96239 1.21139 0.99734 0.97565 0.99137 1.21032 0.97954 0.92304 0.98523 1.20494 0.96330 1.00736 0.99471 1.24020 1.03289 0.97282 0.96284 1.21891 1.01822 0.98665 0.94215 1.19965 0.98680 0.91354 0.98866 0.77749 0.91743 1.17986 1.18188 0.85770 0.75421 0.88996 0.76142 0.89148 0.87595 0.85318 0.85677 0.85732 0.85182 0.85130 0.88208 0.89822 0.90135 0.90522 0.90979 0.90674 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.44 12.86 -35.23 -0.45 -0.89 16 2 C -0.05 -0.03 2.80 36.00 0.10 0.07 16 3 Si 0.66 -0.15 29.91 -169.99 -5.08 -5.24 16 4 C -0.23 -0.52 5.40 -101.34 -0.55 -1.07 16 5 C 0.14 0.37 9.61 -16.08 -0.15 0.21 16 6 N -0.73 -1.67 5.47 -55.34 -0.30 -1.97 16 7 C 0.14 0.06 3.36 -68.51 -0.23 -0.17 16 8 C 0.51 0.77 7.10 -10.99 -0.08 0.69 16 9 O -0.53 -2.98 15.66 5.55 0.09 -2.89 16 10 N -0.72 1.05 5.35 -53.02 -0.28 0.77 16 11 C 0.13 -0.06 4.17 -67.12 -0.28 -0.34 16 12 H 0.12 0.28 7.46 -51.93 -0.39 -0.10 16 13 C -0.14 0.33 7.66 -25.92 -0.20 0.13 16 14 C 0.06 -0.06 3.75 -25.92 -0.10 -0.15 16 15 H 0.10 -0.22 5.95 -51.93 -0.31 -0.53 16 16 O -0.29 -0.59 10.07 -19.44 -0.20 -0.79 16 17 C 0.13 0.29 6.68 -39.22 -0.26 0.02 16 18 C -0.21 -0.21 9.02 -39.43 -0.36 -0.57 16 19 C -0.08 -0.05 10.04 -39.60 -0.40 -0.45 16 20 C -0.16 -0.11 10.04 -39.56 -0.40 -0.51 16 21 C -0.08 -0.08 10.04 -39.60 -0.40 -0.47 16 22 C -0.15 -0.30 9.99 -39.43 -0.39 -0.69 16 23 C -0.17 0.18 7.71 -25.92 -0.20 -0.02 16 24 C -0.13 0.02 5.47 -26.43 -0.14 -0.12 16 25 C -0.05 -0.04 5.85 -28.11 -0.16 -0.20 16 26 H 0.38 -1.49 8.74 45.56 0.40 -1.09 16 27 H 0.06 -0.04 7.96 -51.93 -0.41 -0.45 16 28 H -0.25 -0.70 6.88 56.52 0.39 -0.31 16 29 H -0.26 -0.67 7.11 56.52 0.40 -0.26 16 30 H 0.13 0.32 4.34 -52.49 -0.23 0.09 16 31 H 0.41 1.02 8.08 -40.82 -0.33 0.69 16 32 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 33 H 0.40 -1.81 8.73 -40.82 -0.36 -2.17 16 34 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 35 H 0.11 -0.50 8.12 -51.93 -0.42 -0.92 16 36 H 0.13 -0.12 5.91 -52.49 -0.31 -0.43 16 37 H 0.13 -0.17 8.06 -52.49 -0.42 -0.59 16 38 H 0.12 -0.13 8.06 -52.49 -0.42 -0.56 16 39 H 0.13 -0.14 8.06 -52.49 -0.42 -0.57 16 40 H 0.13 0.14 8.06 -52.49 -0.42 -0.28 16 41 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 42 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 43 H 0.08 -0.20 8.14 -51.92 -0.42 -0.62 16 44 H 0.08 0.11 8.14 -51.93 -0.42 -0.31 16 45 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 46 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 LS Contribution 374.67 15.07 5.65 5.65 Total: 0.00 -8.89 374.67 -11.43 -20.31 By element: Atomic # 1 Polarization: -4.67 SS G_CDS: -6.64 Total: -11.32 kcal Atomic # 6 Polarization: 0.56 SS G_CDS: -4.20 Total: -3.64 kcal Atomic # 7 Polarization: -0.62 SS G_CDS: -0.59 Total: -1.20 kcal Atomic # 8 Polarization: -4.01 SS G_CDS: -0.56 Total: -4.57 kcal Atomic # 14 Polarization: -0.15 SS G_CDS: -5.08 Total: -5.24 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -8.89 -11.43 -20.31 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_15413834.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.862 kcal (2) G-P(sol) polarization free energy of solvation -8.887 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -6.025 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.426 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.314 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.452 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds