Wall clock time and date at job start Sat Mar 6 2021 18:58:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37637 * 125.68247 * 2 1 4 4 C 1.46682 * 126.22143 * 0.02562 * 3 2 1 5 5 O 1.21698 * 119.99960 * 5.02193 * 4 3 2 6 6 N 1.34770 * 119.99979 * 185.02397 * 4 3 2 7 7 C 1.46498 * 120.00238 * 185.02105 * 6 4 3 8 8 H 1.09002 * 112.84960 * 25.33238 * 7 6 4 9 9 C 1.53780 * 113.61747 * 156.52479 * 7 6 4 10 10 C 1.53787 * 87.08172 * 139.98150 * 9 7 6 11 11 H 1.08995 * 113.61514 * 220.02561 * 10 9 7 12 12 O 1.42900 * 113.61236 * 89.19635 * 10 9 7 13 13 C 1.35903 * 116.99629 * 157.14679 * 12 10 9 14 14 C 1.38729 * 120.05442 * 5.61257 * 13 12 10 15 15 C 1.38149 * 119.94265 * 179.69694 * 14 13 12 16 16 C 1.38269 * 120.05215 * 0.58976 * 15 14 13 17 17 C 1.38266 * 120.11450 * 359.67823 * 16 15 14 18 18 C 1.38150 * 120.05282 * 0.02587 * 17 16 15 19 19 C 1.53785 * 113.61559 * 254.13775 * 7 6 4 20 20 C 1.37877 * 107.55378 * 180.02562 * 3 2 1 21 21 C 1.39873 * 107.09325 * 359.97438 * 20 3 2 22 22 Br 1.89103 * 126.07703 * 180.02562 * 21 20 3 23 23 C 1.35507 * 107.85233 * 359.73971 * 21 20 3 24 24 C 1.50704 * 125.57395 * 180.27503 * 23 21 20 25 25 O 1.42893 * 109.47221 * 244.52396 * 24 23 21 26 26 Si 1.86297 * 109.46846 * 124.52249 * 24 23 21 27 27 H 1.09005 * 109.46795 * 84.15315 * 1 2 3 28 28 H 1.08994 * 109.46580 * 324.15977 * 1 2 3 29 29 H 1.08998 * 109.47099 * 204.15708 * 1 2 3 30 30 H 0.97006 * 120.00155 * 5.01584 * 6 4 3 31 31 H 1.08996 * 113.61820 * 254.52946 * 9 7 6 32 32 H 1.08997 * 113.61165 * 25.43698 * 9 7 6 33 33 H 1.07995 * 120.03321 * 359.97438 * 14 13 12 34 34 H 1.07998 * 119.97306 * 180.27203 * 15 14 13 35 35 H 1.08000 * 119.94325 * 179.70314 * 16 15 14 36 36 H 1.08000 * 119.97536 * 180.02562 * 17 16 15 37 37 H 1.07998 * 120.02616 * 180.02562 * 18 17 16 38 38 H 1.08998 * 113.61051 * 334.56164 * 19 7 6 39 39 H 1.08996 * 113.61597 * 105.46851 * 19 7 6 40 40 H 1.08006 * 126.45558 * 179.97438 * 20 3 2 41 41 H 1.09000 * 109.46932 * 4.52396 * 24 23 21 42 42 H 0.96705 * 114.00277 * 300.00324 * 25 24 23 43 43 H 1.48506 * 109.99985 * 184.96432 * 26 24 23 44 44 H 1.48495 * 110.00176 * 306.28203 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2679 1.1180 0.0000 4 6 1.8122 2.5122 0.0005 5 8 0.6253 2.7645 0.0933 6 7 2.7081 3.5139 -0.1017 7 6 2.2660 4.9062 0.0092 8 1 1.3469 5.0139 0.5853 9 6 3.3804 5.8739 0.4409 10 6 2.7998 6.8715 -0.5754 11 1 3.5597 7.4221 -1.1298 12 8 1.7868 7.7195 -0.0304 13 6 1.5637 8.9004 -0.6650 14 6 2.2202 9.1854 -1.8534 15 6 1.9870 10.3839 -2.4997 16 6 1.1093 11.3041 -1.9567 17 6 0.4580 11.0247 -0.7695 18 6 0.6832 9.8251 -0.1225 19 6 2.2418 5.6538 -1.3345 20 6 3.5782 0.6890 -0.0006 21 6 3.5529 -0.7095 -0.0003 22 35 5.0609 -1.8505 -0.0002 23 6 2.2558 -1.1016 0.0062 24 6 1.7712 -2.5286 0.0147 25 8 1.0649 -2.7990 -1.1977 26 14 0.6343 -2.7896 1.4672 27 1 -0.3633 0.1047 -1.0224 28 1 -0.3632 0.8331 0.6017 29 1 -0.3633 -0.9377 0.4206 30 1 3.6456 3.3130 -0.2487 31 1 3.2945 6.2051 1.4757 32 1 4.3822 5.5267 0.1882 33 1 2.9096 8.4692 -2.2753 34 1 2.4944 10.6044 -3.4272 35 1 0.9319 12.2425 -2.4610 36 1 -0.2274 11.7449 -0.3476 37 1 0.1739 9.6071 0.8046 38 1 2.9318 5.2462 -2.0733 39 1 1.2381 5.8075 -1.7307 40 1 4.4584 1.3149 -0.0011 41 1 2.6248 -3.2016 0.0958 42 1 0.2912 -2.2357 -1.3362 43 1 0.2446 -4.2199 1.5566 44 1 1.3077 -2.3675 2.7216 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_11987230_5000100.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:58:22 Heat of formation + Delta-G solvation = 19.366660 kcal Electronic energy + Delta-G solvation = -29146.101535 eV Core-core repulsion = 24886.144378 eV Total energy + Delta-G solvation = -4259.957157 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.057 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.92084 -41.66750 -40.47209 -39.23375 -37.90065 -37.33967 -34.91254 -34.12556 -32.14346 -31.90215 -30.98062 -30.62589 -27.58017 -27.36974 -26.85276 -25.67394 -23.69348 -23.36610 -22.90594 -21.67209 -21.07362 -20.40846 -19.33412 -18.89437 -18.06323 -17.57750 -17.18418 -17.07695 -16.88092 -16.68088 -16.21129 -16.11879 -15.69685 -15.63883 -15.24791 -15.20176 -14.71102 -14.42799 -14.37033 -14.35808 -14.27450 -13.95064 -13.73666 -13.59054 -13.48446 -13.28871 -13.14263 -12.95540 -12.56192 -12.47893 -12.37683 -12.07249 -11.95006 -11.47076 -11.40861 -11.29850 -11.09508 -10.83741 -10.21706 -9.96203 -9.82728 -9.32045 -9.17528 -5.24037 0.11567 0.38138 0.47191 0.59591 0.88937 1.15901 1.41385 1.51970 1.80170 2.09391 2.12549 2.25096 2.82500 3.17224 3.32085 3.40675 3.43322 3.51535 3.69904 3.73097 3.87215 3.88230 3.92395 4.02638 4.17867 4.23988 4.29306 4.32633 4.39067 4.48733 4.53575 4.60240 4.64215 4.66721 4.70138 4.74303 4.85001 4.95172 5.00102 5.08061 5.22267 5.34664 5.42078 5.48196 5.54042 5.60744 5.80084 5.86299 6.39394 6.44421 6.46063 7.03933 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.052 3.948 2 N -0.396 5.396 3 C -0.044 4.044 4 C 0.592 3.408 5 O -0.571 6.571 6 N -0.693 5.693 7 C 0.129 3.871 8 H 0.094 0.906 9 C -0.125 4.125 10 C 0.051 3.949 11 H 0.112 0.888 12 O -0.311 6.311 13 C 0.112 3.888 14 C -0.215 4.215 15 C -0.088 4.088 16 C -0.168 4.168 17 C -0.088 4.088 18 C -0.173 4.173 19 C -0.163 4.163 20 C -0.104 4.104 21 C -0.181 4.181 22 Br -0.027 7.027 23 C 0.047 3.953 24 C -0.054 4.054 25 O -0.539 6.539 26 Si 0.751 3.249 27 H 0.110 0.890 28 H 0.107 0.893 29 H 0.110 0.890 30 H 0.419 0.581 31 H 0.085 0.915 32 H 0.137 0.863 33 H 0.146 0.854 34 H 0.144 0.856 35 H 0.141 0.859 36 H 0.146 0.854 37 H 0.130 0.870 38 H 0.120 0.880 39 H 0.062 0.938 40 H 0.180 0.820 41 H 0.126 0.874 42 H 0.390 0.610 43 H -0.268 1.268 44 H -0.285 1.285 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.697 3.262 -1.594 3.697 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 N -0.069 5.069 3 C -0.159 4.159 4 C 0.380 3.620 5 O -0.452 6.452 6 N -0.344 5.344 7 C 0.025 3.975 8 H 0.112 0.888 9 C -0.163 4.163 10 C -0.006 4.006 11 H 0.130 0.870 12 O -0.226 6.226 13 C 0.067 3.933 14 C -0.233 4.233 15 C -0.106 4.106 16 C -0.186 4.186 17 C -0.106 4.106 18 C -0.192 4.192 19 C -0.202 4.202 20 C -0.131 4.131 21 C -0.267 4.267 22 Br 0.057 6.943 23 C -0.074 4.074 24 C -0.164 4.164 25 O -0.346 6.346 26 Si 0.652 3.348 27 H 0.128 0.872 28 H 0.125 0.875 29 H 0.127 0.873 30 H 0.257 0.743 31 H 0.104 0.896 32 H 0.155 0.845 33 H 0.163 0.837 34 H 0.162 0.838 35 H 0.158 0.842 36 H 0.163 0.837 37 H 0.148 0.852 38 H 0.138 0.862 39 H 0.081 0.919 40 H 0.197 0.803 41 H 0.143 0.857 42 H 0.240 0.760 43 H -0.193 1.193 44 H -0.211 1.211 Dipole moment (debyes) X Y Z Total from point charges 0.254 2.131 -0.657 2.244 hybrid contribution 0.791 0.041 -0.277 0.839 sum 1.045 2.172 -0.933 2.585 Atomic orbital electron populations 1.22764 0.73823 1.05404 1.06606 1.43904 1.07890 1.03604 1.51501 1.20047 0.90048 0.87682 1.18078 1.16977 0.85547 0.83661 0.75796 1.90817 1.17305 1.85072 1.51991 1.45518 1.11605 1.04876 1.72408 1.22490 0.99092 0.78390 0.97569 0.88769 1.23608 0.99570 0.92570 1.00541 1.23372 0.90077 0.89914 0.97195 0.87016 1.86061 1.55530 1.27645 1.53317 1.19234 0.96004 0.85739 0.92306 1.21511 1.04664 1.00569 0.96590 1.21325 0.96792 0.92747 0.99775 1.21435 0.98973 1.01057 0.97128 1.21289 0.98549 0.95770 0.94956 1.20703 1.01662 0.94240 1.02563 1.24042 1.02899 0.95401 0.97830 1.21518 0.95849 0.92716 1.03017 1.20993 0.91399 0.95047 1.19283 1.96660 1.36024 1.63373 1.98251 1.20862 0.89942 0.90258 1.06378 1.24959 1.02832 0.89985 0.98589 1.86591 1.45511 1.62846 1.39674 0.94401 0.84686 0.82322 0.73377 0.87182 0.87460 0.87293 0.74283 0.89623 0.84473 0.83651 0.83796 0.84153 0.83656 0.85173 0.86177 0.91919 0.80303 0.85668 0.76003 1.19327 1.21113 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.30 8.92 127.77 1.14 0.84 16 2 N -0.40 -0.08 3.10 -519.59 -1.61 -1.69 16 3 C -0.04 -0.06 6.88 40.35 0.28 0.22 16 4 C 0.59 1.47 7.77 86.45 0.67 2.14 16 5 O -0.57 -4.96 14.44 -4.34 -0.06 -5.02 16 6 N -0.69 2.47 5.34 -443.99 -2.37 0.10 16 7 C 0.13 -0.26 4.11 45.52 0.19 -0.08 16 8 H 0.09 0.40 7.57 -2.39 -0.02 0.38 16 9 C -0.13 0.82 7.66 31.12 0.24 1.05 16 10 C 0.05 -0.16 3.73 31.18 0.12 -0.05 16 11 H 0.11 -0.73 5.98 -2.39 -0.01 -0.75 16 12 O -0.31 -1.20 10.07 -92.46 -0.93 -2.13 16 13 C 0.11 0.49 6.68 22.50 0.15 0.64 16 14 C -0.21 -0.27 9.01 22.37 0.20 -0.07 16 15 C -0.09 -0.03 10.04 22.26 0.22 0.20 16 16 C -0.17 -0.11 10.04 22.28 0.22 0.11 16 17 C -0.09 -0.15 10.04 22.26 0.22 0.08 16 18 C -0.17 -0.74 9.99 22.37 0.22 -0.52 16 19 C -0.16 0.51 7.72 31.18 0.24 0.75 16 20 C -0.10 0.01 10.33 22.58 0.23 0.24 16 21 C -0.18 -0.60 6.53 22.03 0.14 -0.46 16 22 Br -0.03 -0.10 33.06 -20.37 -0.67 -0.77 16 23 C 0.05 0.09 5.28 41.35 0.22 0.31 16 24 C -0.05 -0.03 2.87 71.24 0.20 0.17 16 25 O -0.54 0.12 12.88 -148.98 -1.92 -1.80 16 26 Si 0.75 -1.14 29.30 68.60 2.01 0.87 16 27 H 0.11 -0.95 8.14 -2.38 -0.02 -0.97 16 28 H 0.11 -0.29 6.55 -2.39 -0.02 -0.30 16 29 H 0.11 -1.22 3.80 -2.39 -0.01 -1.23 16 30 H 0.42 -4.03 7.65 -92.70 -0.71 -4.74 16 31 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 32 H 0.14 -1.74 8.11 -2.39 -0.02 -1.76 16 33 H 0.15 -0.47 5.92 -2.91 -0.02 -0.49 16 34 H 0.14 -0.62 8.06 -2.91 -0.02 -0.64 16 35 H 0.14 -0.47 8.06 -2.91 -0.02 -0.49 16 36 H 0.15 -0.38 8.06 -2.91 -0.02 -0.41 16 37 H 0.13 0.40 8.06 -2.91 -0.02 0.37 16 38 H 0.12 -0.88 8.14 -2.39 -0.02 -0.90 16 39 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 40 H 0.18 -1.11 7.48 -2.91 -0.02 -1.13 16 41 H 0.13 0.33 6.95 -2.39 -0.02 0.31 16 42 H 0.39 -3.31 7.38 -74.05 -0.55 -3.86 16 43 H -0.27 -0.96 7.11 99.48 0.71 -0.25 16 44 H -0.28 -1.49 7.11 99.48 0.71 -0.79 16 Total: 0.00 -22.04 382.23 -0.78 -22.82 By element: Atomic # 1 Polarization: -17.82 SS G_CDS: -0.15 Total: -17.97 kcal Atomic # 6 Polarization: 0.68 SS G_CDS: 4.92 Total: 5.59 kcal Atomic # 7 Polarization: 2.39 SS G_CDS: -3.98 Total: -1.59 kcal Atomic # 8 Polarization: -6.04 SS G_CDS: -2.91 Total: -8.96 kcal Atomic # 14 Polarization: -1.14 SS G_CDS: 2.01 Total: 0.87 kcal Atomic # 35 Polarization: -0.10 SS G_CDS: -0.67 Total: -0.77 kcal Total: -22.04 -0.78 -22.82 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_5000100.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.186 kcal (2) G-P(sol) polarization free energy of solvation -22.036 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.149 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.783 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.819 kcal (6) G-S(sol) free energy of system = (1) + (5) 19.367 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds