Wall clock time and date at job start Sat Mar 6 2021 18:58:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.37942 * 120.06892 * 2 1 4 4 C 1.38381 * 120.13982 * 179.97438 * 3 2 1 5 5 C 1.50704 * 119.85053 * 180.02562 * 4 3 2 6 6 C 1.38337 * 120.29626 * 0.02562 * 4 3 2 7 7 C 1.50702 * 119.92501 * 180.02562 * 6 4 3 8 8 O 1.42904 * 109.47016 * 75.00540 * 7 6 4 9 9 Si 1.86303 * 109.46909 * 194.99979 * 7 6 4 10 10 C 1.37975 * 120.14490 * 359.74444 * 6 4 3 11 11 C 1.39558 * 119.85017 * 0.48889 * 10 6 4 12 12 C 1.47852 * 120.14245 * 179.78608 * 11 10 6 13 13 O 1.21555 * 119.99658 * 175.44675 * 12 11 10 14 14 N 1.34776 * 119.99922 * 355.45075 * 12 11 10 15 15 C 1.46503 * 119.99645 * 179.97438 * 14 12 11 16 16 H 1.08999 * 112.85174 * 23.80506 * 15 14 12 17 17 C 1.53776 * 113.61008 * 155.00126 * 15 14 12 18 18 C 1.53778 * 87.08388 * 89.19944 * 17 15 14 19 19 H 1.08998 * 113.61566 * 270.79601 * 18 17 15 20 20 O 1.42895 * 113.61600 * 139.97791 * 18 17 15 21 21 C 1.35901 * 117.00266 * 158.96266 * 20 18 17 22 22 C 1.38741 * 120.05251 * 6.58523 * 21 20 18 23 23 C 1.38137 * 119.94071 * 179.97438 * 22 21 20 24 24 C 1.38267 * 120.05976 * 359.97438 * 23 22 21 25 25 C 1.38261 * 120.11133 * 0.28189 * 24 23 22 26 26 C 1.38151 * 120.05458 * 359.44321 * 25 24 23 27 27 C 1.53781 * 87.08286 * 25.42949 * 18 17 15 28 28 H 1.08998 * 109.47514 * 262.86004 * 1 2 3 29 29 H 1.09004 * 109.47243 * 22.86922 * 1 2 3 30 30 H 1.09005 * 109.46805 * 142.85923 * 1 2 3 31 31 H 1.07995 * 119.92774 * 359.97438 * 3 2 1 32 32 H 1.09003 * 109.47436 * 89.99413 * 5 4 3 33 33 H 1.08999 * 109.46971 * 210.00145 * 5 4 3 34 34 H 1.09007 * 109.46798 * 329.99473 * 5 4 3 35 35 H 1.08997 * 109.47502 * 315.00017 * 7 6 4 36 36 H 0.96693 * 114.00595 * 59.99787 * 8 7 6 37 37 H 1.48497 * 110.00005 * 180.02562 * 9 7 6 38 38 H 1.48506 * 109.99882 * 301.32250 * 9 7 6 39 39 H 1.08001 * 120.07688 * 180.24877 * 10 6 4 40 40 H 0.96996 * 120.00296 * 359.97438 * 14 12 11 41 41 H 1.08995 * 113.62015 * 334.64581 * 17 15 14 42 42 H 1.09010 * 113.68531 * 203.75852 * 17 15 14 43 43 H 1.07999 * 120.02468 * 359.94817 * 22 21 20 44 44 H 1.08010 * 119.97057 * 180.02562 * 23 22 21 45 45 H 1.08004 * 119.94562 * 179.97438 * 24 23 22 46 46 H 1.07997 * 119.97597 * 179.72606 * 25 24 23 47 47 H 1.07998 * 120.02785 * 180.27833 * 26 25 24 48 48 H 1.08998 * 113.61154 * 89.11618 * 27 18 17 49 49 H 1.08994 * 113.61674 * 220.02469 * 27 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1938 0.0000 4 6 3.5820 1.1955 0.0005 5 6 4.3304 2.5035 0.0011 6 6 4.2813 0.0019 0.0005 7 6 5.7883 0.0136 0.0017 8 8 6.2609 0.3652 1.3037 9 14 6.4226 -1.6781 -0.4532 10 6 3.6021 -1.1991 0.0053 11 6 2.2066 -1.2080 -0.0001 12 6 1.4723 -2.4912 0.0002 13 8 0.2593 -2.4973 0.0790 14 7 2.1478 -3.6542 -0.0868 15 6 1.4202 -4.9258 -0.0860 16 1 0.3881 -4.8231 -0.4212 17 6 2.1807 -6.0710 -0.7750 18 6 2.8108 -6.3719 0.5951 19 1 3.7337 -5.8227 0.7813 20 8 2.9294 -7.7678 0.8765 21 6 3.8397 -8.1324 1.8174 22 6 4.5047 -7.1624 2.5535 23 6 5.4291 -7.5356 3.5097 24 6 5.6915 -8.8745 3.7340 25 6 5.0340 -9.8429 2.9982 26 6 4.1045 -9.4751 2.0446 27 6 1.5669 -5.7206 1.2223 28 1 -0.3634 -0.1277 1.0197 29 1 -0.3634 0.9469 -0.3994 30 1 -0.3633 -0.8193 -0.6205 31 1 1.6581 2.1290 -0.0004 32 1 4.5104 2.8188 1.0289 33 1 5.2835 2.3769 -0.5124 34 1 3.7386 3.2610 -0.5129 35 1 6.1466 0.7433 -0.7243 36 1 5.9797 -0.2421 2.0015 37 1 7.9076 -1.6801 -0.4550 38 1 5.9150 -2.6871 0.5110 39 1 4.1492 -2.1303 0.0094 40 1 3.1157 -3.6493 -0.1500 41 1 2.8992 -5.7315 -1.5210 42 1 1.5336 -6.8676 -1.1425 43 1 4.3001 -6.1165 2.3786 44 1 5.9468 -6.7809 4.0833 45 1 6.4149 -9.1642 4.4818 46 1 5.2439 -10.8879 3.1721 47 1 3.5879 -10.2321 1.4733 48 1 0.7510 -6.4208 1.4016 49 1 1.7899 -5.0981 2.0888 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_11987230_9599494.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:58:57 Heat of formation + Delta-G solvation = -16.668760 kcal Electronic energy + Delta-G solvation = -31129.927757 eV Core-core repulsion = 26989.888142 eV Total energy + Delta-G solvation = -4140.039615 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.166 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.00765 -41.35388 -40.29385 -39.26592 -37.86132 -37.43521 -34.69766 -34.44285 -32.99980 -31.95640 -30.71607 -29.36175 -28.64028 -27.00241 -26.27781 -25.60649 -23.88367 -23.59073 -23.15514 -22.51158 -21.14488 -20.52398 -19.59404 -19.07741 -17.70877 -17.53312 -17.25901 -16.82937 -16.74919 -16.57250 -16.38184 -16.20720 -16.10017 -15.72972 -15.53024 -15.13648 -15.02492 -14.66145 -14.59298 -14.41041 -14.17118 -14.04600 -13.98450 -13.66174 -13.62607 -13.40582 -13.18266 -13.14675 -12.83764 -12.79399 -12.64292 -12.58343 -12.51155 -12.01188 -11.95810 -11.85652 -11.62426 -11.43274 -10.71134 -10.65455 -10.25639 -9.97574 -9.95362 -9.65447 -9.16193 -5.14452 -0.27383 0.11786 0.36613 0.48012 1.10575 1.35617 1.71813 1.80281 1.90352 2.17044 2.61260 2.81930 3.19237 3.23906 3.27623 3.39600 3.49760 3.58368 3.60481 3.63247 3.77004 3.87125 3.92907 4.06779 4.11764 4.15832 4.24570 4.37673 4.42650 4.47546 4.48098 4.49078 4.55390 4.60438 4.63692 4.67156 4.67805 4.70664 4.77769 4.83503 4.84941 4.92247 5.00792 5.03485 5.04490 5.23978 5.33436 5.40680 5.44094 5.45076 5.53587 5.58943 5.76809 5.80935 6.26662 6.30773 6.44869 7.09981 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.006 4.006 3 C -0.132 4.132 4 C -0.022 4.022 5 C -0.122 4.122 6 C -0.135 4.135 7 C -0.072 4.072 8 O -0.525 6.525 9 Si 0.680 3.320 10 C -0.080 4.080 11 C -0.147 4.147 12 C 0.565 3.435 13 O -0.521 6.521 14 N -0.715 5.715 15 C 0.124 3.876 16 H 0.119 0.881 17 C -0.135 4.135 18 C 0.053 3.947 19 H 0.096 0.904 20 O -0.299 6.299 21 C 0.129 3.871 22 C -0.210 4.210 23 C -0.081 4.081 24 C -0.158 4.158 25 C -0.080 4.080 26 C -0.153 4.153 27 C -0.166 4.166 28 H 0.077 0.923 29 H 0.061 0.939 30 H 0.098 0.902 31 H 0.134 0.866 32 H 0.080 0.920 33 H 0.074 0.926 34 H 0.070 0.930 35 H 0.121 0.879 36 H 0.375 0.625 37 H -0.252 1.252 38 H -0.259 1.259 39 H 0.126 0.874 40 H 0.398 0.602 41 H 0.086 0.914 42 H 0.112 0.888 43 H 0.125 0.875 44 H 0.124 0.876 45 H 0.124 0.876 46 H 0.130 0.870 47 H 0.131 0.869 48 H 0.106 0.894 49 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.124 0.526 -1.975 2.948 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C -0.007 4.007 3 C -0.150 4.150 4 C -0.023 4.023 5 C -0.178 4.178 6 C -0.135 4.135 7 C -0.182 4.182 8 O -0.331 6.331 9 Si 0.582 3.418 10 C -0.098 4.098 11 C -0.150 4.150 12 C 0.354 3.646 13 O -0.398 6.398 14 N -0.367 5.367 15 C 0.019 3.981 16 H 0.137 0.863 17 C -0.173 4.173 18 C -0.003 4.003 19 H 0.114 0.886 20 O -0.213 6.213 21 C 0.084 3.916 22 C -0.229 4.229 23 C -0.099 4.099 24 C -0.177 4.177 25 C -0.098 4.098 26 C -0.171 4.171 27 C -0.205 4.205 28 H 0.096 0.904 29 H 0.080 0.920 30 H 0.116 0.884 31 H 0.151 0.849 32 H 0.098 0.902 33 H 0.093 0.907 34 H 0.089 0.911 35 H 0.139 0.861 36 H 0.223 0.777 37 H -0.177 1.177 38 H -0.185 1.185 39 H 0.143 0.857 40 H 0.233 0.767 41 H 0.105 0.895 42 H 0.131 0.869 43 H 0.143 0.857 44 H 0.142 0.858 45 H 0.142 0.858 46 H 0.148 0.852 47 H 0.149 0.851 48 H 0.124 0.876 49 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 1.854 0.200 -2.128 2.830 hybrid contribution 0.556 0.359 1.379 1.530 sum 2.410 0.558 -0.749 2.585 Atomic orbital electron populations 1.21150 0.89603 1.03466 1.03926 1.20110 0.97061 0.91234 0.92331 1.21054 0.93366 0.97895 1.02648 1.20012 0.93430 0.95173 0.93646 1.20935 1.00244 0.93325 1.03288 1.19966 0.96016 0.92738 1.04781 1.24968 0.91741 1.12983 0.88478 1.86621 1.76142 1.54114 1.16241 0.95117 0.81548 0.75017 0.90131 1.21170 0.93294 0.97575 0.97780 1.19562 0.92969 0.93088 1.09354 1.18239 0.87149 0.83412 0.75799 1.90758 1.13363 1.86973 1.48751 1.45652 1.10235 1.05153 1.75672 1.21606 0.98130 0.81842 0.96541 0.86290 1.23596 1.00199 0.97906 0.95600 1.24233 0.98276 0.80388 0.97422 0.88586 1.86165 1.55045 1.25624 1.54425 1.19039 0.89535 0.93700 0.89353 1.21243 1.01925 0.99000 1.00725 1.20983 0.96196 0.96431 0.96287 1.21122 1.02013 0.92929 1.01597 1.21038 0.94601 0.99880 0.94258 1.20510 1.01501 0.93382 1.01743 1.24044 0.98839 0.99311 0.98347 0.90415 0.92031 0.88357 0.84854 0.90177 0.90736 0.91148 0.86131 0.77722 1.17708 1.18460 0.85677 0.76656 0.89536 0.86950 0.85745 0.85844 0.85770 0.85190 0.85092 0.87562 0.90388 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.15 8.74 36.01 0.31 0.16 16 2 C -0.01 -0.01 5.91 -104.23 -0.62 -0.62 16 3 C -0.13 -0.01 9.31 -39.64 -0.37 -0.38 16 4 C -0.02 0.01 5.89 -104.53 -0.62 -0.61 16 5 C -0.12 0.17 9.53 36.01 0.34 0.51 16 6 C -0.13 0.10 5.25 -104.68 -0.55 -0.45 16 7 C -0.07 0.11 2.04 36.01 0.07 0.18 16 8 O -0.52 0.07 12.80 -35.23 -0.45 -0.38 16 9 Si 0.68 -1.56 30.25 -169.99 -5.14 -6.71 16 10 C -0.08 0.07 8.14 -39.19 -0.32 -0.24 16 11 C -0.15 -0.12 5.87 -104.97 -0.62 -0.74 16 12 C 0.57 0.88 7.72 -12.33 -0.10 0.78 16 13 O -0.52 -2.28 12.91 5.32 0.07 -2.21 16 14 N -0.72 0.74 5.22 -53.96 -0.28 0.46 16 15 C 0.12 -0.13 4.32 -67.12 -0.29 -0.42 16 16 H 0.12 0.01 7.46 -51.93 -0.39 -0.38 16 17 C -0.13 0.29 7.66 -25.92 -0.20 0.09 16 18 C 0.05 -0.05 3.46 -25.92 -0.09 -0.14 16 19 H 0.10 -0.18 6.14 -51.93 -0.32 -0.49 16 20 O -0.30 -0.51 10.15 -19.43 -0.20 -0.71 16 21 C 0.13 0.27 6.68 -39.21 -0.26 0.01 16 22 C -0.21 -0.27 9.00 -39.43 -0.35 -0.62 16 23 C -0.08 -0.07 10.04 -39.61 -0.40 -0.47 16 24 C -0.16 -0.12 10.04 -39.56 -0.40 -0.52 16 25 C -0.08 -0.06 10.04 -39.60 -0.40 -0.46 16 26 C -0.15 -0.26 9.99 -39.43 -0.39 -0.65 16 27 C -0.17 0.11 7.71 -25.92 -0.20 -0.09 16 28 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 29 H 0.06 -0.02 8.04 -51.93 -0.42 -0.43 16 30 H 0.10 0.27 5.84 -51.93 -0.30 -0.04 16 31 H 0.13 -0.19 8.05 -52.49 -0.42 -0.61 16 32 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.07 -0.12 6.22 -51.93 -0.32 -0.45 16 34 H 0.07 -0.16 8.08 -51.93 -0.42 -0.58 16 35 H 0.12 -0.26 6.48 -51.93 -0.34 -0.60 16 36 H 0.38 -1.01 8.70 45.56 0.40 -0.61 16 37 H -0.25 -0.30 7.11 56.52 0.40 0.11 16 38 H -0.26 0.38 6.67 56.52 0.38 0.76 16 39 H 0.13 -0.36 3.23 -52.49 -0.17 -0.53 16 40 H 0.40 -1.24 6.76 -40.82 -0.28 -1.51 16 41 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 42 H 0.11 -0.25 8.14 -51.92 -0.42 -0.67 16 43 H 0.12 -0.04 6.00 -52.49 -0.31 -0.35 16 44 H 0.12 -0.11 8.06 -52.48 -0.42 -0.54 16 45 H 0.12 -0.12 8.06 -52.48 -0.42 -0.54 16 46 H 0.13 -0.17 8.06 -52.49 -0.42 -0.59 16 47 H 0.13 0.08 8.06 -52.49 -0.42 -0.35 16 48 H 0.11 -0.04 8.14 -51.93 -0.42 -0.46 16 49 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 LS Contribution 394.52 15.07 5.95 5.95 Total: 0.00 -6.85 394.52 -12.23 -19.08 By element: Atomic # 1 Polarization: -4.08 SS G_CDS: -6.74 Total: -10.82 kcal Atomic # 6 Polarization: 0.76 SS G_CDS: -5.43 Total: -4.67 kcal Atomic # 7 Polarization: 0.74 SS G_CDS: -0.28 Total: 0.46 kcal Atomic # 8 Polarization: -2.72 SS G_CDS: -0.58 Total: -3.30 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: -5.14 Total: -6.71 kcal Total LS contribution 5.95 Total: 5.95 kcal Total: -6.85 -12.23 -19.08 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_11987230_9599494.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.416 kcal (2) G-P(sol) polarization free energy of solvation -6.853 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -4.438 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.231 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.084 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.669 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds