Wall clock time and date at job start Sat Mar 6 2021 18:06:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36417 * 125.80528 * 2 1 4 4 C 1.47386 * 127.18738 * 0.02562 * 3 2 1 5 5 O 1.21613 * 120.00123 * 359.70000 * 4 3 2 6 6 N 1.34772 * 119.99601 * 179.71118 * 4 3 2 7 7 C 1.46505 * 119.99700 * 179.97438 * 6 4 3 8 8 H 1.08999 * 112.90430 * 23.75118 * 7 6 4 9 9 C 1.53781 * 113.61143 * 154.99591 * 7 6 4 10 10 C 1.53784 * 87.07958 * 89.12145 * 9 7 6 11 11 H 1.08999 * 113.61845 * 140.06703 * 10 9 7 12 12 N 1.46507 * 113.61122 * 270.88331 * 10 9 7 13 13 C 1.34773 * 119.99575 * 203.47178 * 12 10 9 14 14 O 1.21513 * 120.00527 * 359.97438 * 13 12 10 15 15 O 1.34639 * 119.99616 * 179.97438 * 13 12 10 16 16 C 1.45206 * 116.99892 * 179.97438 * 15 13 12 17 17 C 1.50699 * 109.47021 * 179.97438 * 16 15 13 18 18 C 1.38236 * 120.00277 * 269.72923 * 17 16 15 19 19 C 1.38226 * 120.00377 * 179.78944 * 18 17 16 20 20 C 1.38240 * 119.99844 * 0.44045 * 19 18 17 21 21 C 1.38226 * 119.99919 * 359.80775 * 20 19 18 22 22 C 1.38236 * 120.00380 * 359.97438 * 21 20 19 23 23 C 1.53776 * 87.17448 * 25.47028 * 10 9 7 24 24 C 1.47021 * 105.61899 * 179.73760 * 3 2 1 25 25 C 1.34181 * 105.95291 * 0.26042 * 24 3 2 26 26 C 1.50695 * 125.43905 * 179.97438 * 25 24 3 27 27 O 1.42904 * 109.46839 * 64.99589 * 26 25 24 28 28 Si 1.86296 * 109.47468 * 185.00032 * 26 25 24 29 29 O 1.33658 * 125.80296 * 180.19074 * 2 1 3 30 30 H 1.09000 * 109.47179 * 89.99898 * 1 2 3 31 31 H 1.09001 * 109.47072 * 210.00015 * 1 2 3 32 32 H 1.09001 * 109.46925 * 329.99956 * 1 2 3 33 33 H 0.96996 * 120.00640 * 359.97438 * 6 4 3 34 34 H 1.08997 * 113.61652 * 334.57426 * 9 7 6 35 35 H 1.09005 * 113.61557 * 203.66318 * 9 7 6 36 36 H 0.96996 * 119.99762 * 23.47050 * 12 10 9 37 37 H 1.09000 * 109.47070 * 300.00042 * 16 15 13 38 38 H 1.09001 * 109.46626 * 60.00059 * 16 15 13 39 39 H 1.08004 * 119.99728 * 359.97438 * 18 17 16 40 40 H 1.08002 * 120.00205 * 180.27350 * 19 18 17 41 41 H 1.08002 * 119.99919 * 179.83634 * 20 19 18 42 42 H 1.08008 * 120.00171 * 180.02562 * 21 20 19 43 43 H 1.07994 * 120.00669 * 179.97438 * 22 21 20 44 44 H 1.09007 * 113.61050 * 89.07539 * 23 10 9 45 45 H 1.08997 * 113.62144 * 219.97886 * 23 10 9 46 46 H 1.07995 * 127.02257 * 180.24242 * 24 3 2 47 47 H 1.09001 * 109.46937 * 305.00579 * 26 25 24 48 48 H 0.96701 * 113.99293 * 60.00980 * 27 26 25 49 49 H 1.48495 * 110.00000 * 179.97438 * 28 26 25 50 50 H 1.48500 * 109.99932 * 301.32068 * 28 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3051 1.1064 0.0000 4 6 1.8740 2.5158 0.0005 5 8 0.6890 2.7892 -0.0045 6 7 2.7931 3.5015 0.0063 7 6 2.3646 4.9025 0.0063 8 1 1.3598 5.0388 0.4061 9 6 3.4027 5.8641 0.6082 10 6 3.9917 5.9888 -0.8069 11 1 4.3018 7.0018 -1.0631 12 7 5.0180 4.9870 -1.1057 13 6 5.9373 5.2284 -2.0612 14 8 5.9147 6.2768 -2.6751 15 8 6.8809 4.3080 -2.3355 16 6 7.8381 4.6353 -3.3771 17 6 8.8099 3.4955 -3.5425 18 6 9.9787 3.4710 -2.8048 19 6 10.8680 2.4233 -2.9533 20 6 10.5929 1.4045 -3.8463 21 6 9.4266 1.4316 -4.5878 22 6 8.5351 2.4770 -4.4360 23 6 2.5967 5.6187 -1.3377 24 6 3.6850 0.5990 0.0065 25 6 3.5859 -0.7391 0.0038 26 6 4.7459 -1.7011 0.0079 27 8 5.4701 -1.5688 1.2327 28 14 4.1077 -3.4441 -0.1511 29 8 2.2889 -1.0840 -0.0036 30 1 -0.3633 0.0000 -1.0277 31 1 -0.3633 -0.8900 0.5138 32 1 -0.3633 0.8900 0.5138 33 1 3.7382 3.2834 0.0105 34 1 4.0764 5.3888 1.3212 35 1 2.9718 6.7917 0.9850 36 1 5.0359 4.1500 -0.6159 37 1 7.3103 4.8025 -4.3161 38 1 8.3818 5.5385 -3.1000 39 1 10.1956 4.2690 -2.1101 40 1 11.7790 2.4019 -2.3737 41 1 11.2890 0.5872 -3.9643 42 1 9.2115 0.6354 -5.2852 43 1 7.6241 2.4984 -5.0156 44 1 1.9457 6.4793 -1.4919 45 1 2.6199 4.9454 -2.1946 46 1 4.5928 1.1839 0.0119 47 1 5.4059 -1.4779 -0.8303 48 1 4.9437 -1.7532 2.0226 49 1 5.2420 -4.4025 -0.1490 50 1 3.1815 -3.7500 0.9687 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12109458_13308374.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:06:12 Heat of formation + Delta-G solvation = -64.012204 kcal Electronic energy + Delta-G solvation = -35872.585858 eV Core-core repulsion = 31027.702982 eV Total energy + Delta-G solvation = -4844.882876 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.161 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -43.78858 -41.97840 -41.00743 -40.12527 -39.35884 -38.22181 -37.32898 -35.01871 -34.40668 -33.70233 -33.12419 -32.92054 -31.92115 -29.49509 -27.73616 -26.95100 -26.51255 -25.42555 -24.20557 -23.60930 -22.98534 -22.29742 -21.97637 -21.44152 -20.42633 -19.72081 -19.03452 -18.23289 -18.04488 -17.73959 -17.59363 -17.45523 -17.07915 -16.85189 -16.35138 -16.27258 -16.09877 -16.04944 -15.87234 -15.72954 -15.46351 -14.78441 -14.66948 -14.48646 -14.29178 -14.28156 -14.16523 -13.97764 -13.93757 -13.91501 -13.67370 -13.55508 -13.34323 -13.07349 -12.99987 -12.88902 -12.16279 -12.14560 -12.12152 -12.01624 -11.66692 -11.62475 -11.58857 -11.11690 -10.93936 -10.76589 -10.34896 -10.16355 -9.92836 -9.91151 -9.61431 -5.04169 0.08318 0.25404 0.39786 0.78359 1.06799 1.15399 1.38708 1.65012 1.76401 1.86492 2.01570 2.27405 2.71673 3.05357 3.13530 3.22018 3.29880 3.37214 3.64962 3.69384 3.71153 3.75279 3.76883 3.93594 4.00009 4.08028 4.13596 4.18411 4.23398 4.28153 4.35129 4.43127 4.49041 4.51881 4.53736 4.57801 4.59359 4.62210 4.67033 4.74457 4.83528 4.90757 4.92384 5.01831 5.06495 5.16499 5.20864 5.31256 5.44104 5.47517 5.51048 5.51752 5.85838 5.95116 6.15763 6.22051 6.35000 7.13922 7.25793 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.099 3.901 3 C -0.256 4.256 4 C 0.598 3.402 5 O -0.533 6.533 6 N -0.709 5.709 7 C 0.118 3.882 8 H 0.113 0.887 9 C -0.151 4.151 10 C 0.132 3.868 11 H 0.114 0.886 12 N -0.693 5.693 13 C 0.651 3.349 14 O -0.564 6.564 15 O -0.365 6.365 16 C 0.131 3.869 17 C -0.103 4.103 18 C -0.093 4.093 19 C -0.123 4.123 20 C -0.106 4.106 21 C -0.123 4.123 22 C -0.093 4.093 23 C -0.164 4.164 24 C -0.149 4.149 25 C -0.052 4.052 26 C -0.034 4.034 27 O -0.520 6.520 28 Si 0.700 3.300 29 O -0.167 6.167 30 H 0.094 0.906 31 H 0.081 0.919 32 H 0.111 0.889 33 H 0.393 0.607 34 H 0.083 0.917 35 H 0.119 0.881 36 H 0.398 0.602 37 H 0.082 0.918 38 H 0.082 0.918 39 H 0.125 0.875 40 H 0.126 0.874 41 H 0.126 0.874 42 H 0.127 0.873 43 H 0.125 0.875 44 H 0.109 0.891 45 H 0.079 0.921 46 H 0.156 0.844 47 H 0.138 0.862 48 H 0.380 0.620 49 H -0.248 1.248 50 H -0.255 1.255 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.972 -2.386 0.231 2.587 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.046 3.954 3 C -0.260 4.260 4 C 0.387 3.613 5 O -0.411 6.411 6 N -0.361 5.361 7 C 0.012 3.988 8 H 0.131 0.869 9 C -0.190 4.190 10 C 0.028 3.972 11 H 0.132 0.868 12 N -0.353 5.353 13 C 0.404 3.596 14 O -0.452 6.452 15 O -0.279 6.279 16 C 0.057 3.943 17 C -0.103 4.103 18 C -0.111 4.111 19 C -0.141 4.141 20 C -0.124 4.124 21 C -0.141 4.141 22 C -0.111 4.111 23 C -0.204 4.204 24 C -0.168 4.168 25 C -0.100 4.100 26 C -0.144 4.144 27 O -0.327 6.327 28 Si 0.599 3.401 29 O -0.064 6.064 30 H 0.113 0.887 31 H 0.100 0.900 32 H 0.129 0.871 33 H 0.229 0.771 34 H 0.101 0.899 35 H 0.137 0.863 36 H 0.234 0.766 37 H 0.100 0.900 38 H 0.100 0.900 39 H 0.143 0.857 40 H 0.144 0.856 41 H 0.144 0.856 42 H 0.145 0.855 43 H 0.143 0.857 44 H 0.127 0.873 45 H 0.098 0.902 46 H 0.174 0.826 47 H 0.155 0.845 48 H 0.229 0.771 49 H -0.172 1.172 50 H -0.179 1.179 Dipole moment (debyes) X Y Z Total from point charges 0.541 -2.617 -0.164 2.678 hybrid contribution 0.885 0.205 1.219 1.520 sum 1.425 -2.412 1.055 2.994 Atomic orbital electron populations 1.20717 0.83265 1.05437 1.04918 1.22928 0.94087 0.82809 0.95616 1.21077 0.93274 0.93671 1.18009 1.17144 0.85336 0.83616 0.75197 1.90786 1.16365 1.83904 1.50027 1.45564 1.09222 1.05360 1.75995 1.22045 1.00055 0.79717 0.96939 0.86889 1.23768 0.98028 1.01194 0.96024 1.21993 0.86511 0.92757 0.95935 0.86834 1.44433 1.30109 1.21809 1.38977 1.18069 0.79257 0.82001 0.80256 1.91035 1.75617 1.26117 1.52471 1.86303 1.40183 1.45417 1.56036 1.21766 0.87323 0.95979 0.89254 1.19486 0.95227 0.96635 0.98943 1.21116 0.93646 0.98474 0.97884 1.21211 0.99714 0.94313 0.98887 1.21312 0.97072 0.98445 0.95598 1.21208 0.94476 0.98515 0.99899 1.21119 0.99221 0.93164 0.97593 1.24021 0.96483 1.01674 0.98206 1.22555 0.96341 0.93582 1.04352 1.22549 0.82899 0.95536 1.09010 1.24366 0.91373 1.07986 0.90675 1.86672 1.39348 1.91512 1.15151 0.94384 0.81412 0.73577 0.90692 1.83692 1.16388 1.35027 1.71330 0.88749 0.89977 0.87089 0.77080 0.89885 0.86308 0.76564 0.89978 0.89979 0.85719 0.85553 0.85643 0.85521 0.85707 0.87309 0.90245 0.82614 0.84470 0.77113 1.17205 1.17912 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.05 9.89 36.01 0.36 0.40 16 2 C 0.10 0.12 7.37 -34.96 -0.26 -0.14 16 3 C -0.26 -0.37 6.31 -103.27 -0.65 -1.02 16 4 C 0.60 1.27 7.81 -12.54 -0.10 1.18 16 5 O -0.53 -2.52 14.45 5.27 0.08 -2.44 16 6 N -0.71 0.38 5.13 -53.96 -0.28 0.10 16 7 C 0.12 -0.14 4.33 -66.97 -0.29 -0.43 16 8 H 0.11 -0.01 7.46 -51.93 -0.39 -0.40 16 9 C -0.15 0.46 7.58 -25.92 -0.20 0.26 16 10 C 0.13 -0.15 4.30 -67.11 -0.29 -0.44 16 11 H 0.11 -0.01 7.50 -51.93 -0.39 -0.40 16 12 N -0.69 0.25 5.12 -57.93 -0.30 -0.04 16 13 C 0.65 1.70 8.75 54.05 0.47 2.17 16 14 O -0.56 -3.20 15.75 -19.28 -0.30 -3.50 16 15 O -0.37 -0.70 10.25 -40.32 -0.41 -1.12 16 16 C 0.13 0.14 5.60 36.01 0.20 0.34 16 17 C -0.10 -0.09 5.52 -104.62 -0.58 -0.66 16 18 C -0.09 -0.04 9.70 -39.59 -0.38 -0.42 16 19 C -0.12 0.00 10.05 -39.59 -0.40 -0.39 16 20 C -0.11 0.02 10.05 -39.59 -0.40 -0.37 16 21 C -0.12 0.02 10.05 -39.59 -0.40 -0.38 16 22 C -0.09 -0.03 9.70 -39.58 -0.38 -0.42 16 23 C -0.16 0.16 7.70 -25.78 -0.20 -0.04 16 24 C -0.15 -0.01 10.48 -37.45 -0.39 -0.40 16 25 C -0.05 0.00 6.18 -35.74 -0.22 -0.22 16 26 C -0.03 0.04 2.97 36.00 0.11 0.15 16 27 O -0.52 0.12 12.88 -35.23 -0.45 -0.33 16 28 Si 0.70 -0.98 32.09 -169.99 -5.46 -6.43 16 29 O -0.17 -0.14 8.90 7.64 0.07 -0.07 16 30 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 31 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 32 H 0.11 0.07 6.49 -51.93 -0.34 -0.27 16 33 H 0.39 -0.87 5.32 -40.82 -0.22 -1.08 16 34 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 35 H 0.12 -0.52 8.14 -51.93 -0.42 -0.94 16 36 H 0.40 -0.86 6.27 -40.82 -0.26 -1.12 16 37 H 0.08 0.07 8.08 -51.93 -0.42 -0.35 16 38 H 0.08 0.06 8.08 -51.93 -0.42 -0.36 16 39 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 40 H 0.13 -0.22 8.06 -52.49 -0.42 -0.64 16 41 H 0.13 -0.25 8.06 -52.49 -0.42 -0.67 16 42 H 0.13 -0.25 8.06 -52.48 -0.42 -0.67 16 43 H 0.12 -0.12 8.06 -52.49 -0.42 -0.54 16 44 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 45 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 46 H 0.16 -0.29 7.74 -52.49 -0.41 -0.69 16 47 H 0.14 -0.36 7.96 -51.93 -0.41 -0.77 16 48 H 0.38 -1.08 8.70 45.56 0.40 -0.68 16 49 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 50 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 LS Contribution 425.87 15.07 6.42 6.42 Total: 0.00 -9.69 425.87 -11.33 -21.02 By element: Atomic # 1 Polarization: -6.07 SS G_CDS: -6.70 Total: -12.76 kcal Atomic # 6 Polarization: 3.16 SS G_CDS: -4.00 Total: -0.84 kcal Atomic # 7 Polarization: 0.63 SS G_CDS: -0.57 Total: 0.06 kcal Atomic # 8 Polarization: -6.44 SS G_CDS: -1.03 Total: -7.46 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.46 Total: -6.43 kcal Total LS contribution 6.42 Total: 6.42 kcal Total: -9.69 -11.33 -21.02 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12109458_13308374.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.993 kcal (2) G-P(sol) polarization free energy of solvation -9.687 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.680 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.332 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.019 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.012 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds