Wall clock time and date at job start Sat Mar 6 2021 18:06:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86304 * 109.47456 * 2 1 4 4 C 1.50698 * 109.47107 * 120.00221 * 2 1 3 5 5 C 1.34173 * 125.43726 * 65.00038 * 4 2 1 6 6 C 1.47023 * 105.95528 * 179.97438 * 5 4 2 7 7 C 1.47382 * 127.19564 * 179.97438 * 6 5 4 8 8 O 1.21618 * 119.99715 * 359.97438 * 7 6 5 9 9 N 1.34775 * 119.99948 * 179.97438 * 7 6 5 10 10 C 1.46497 * 119.99840 * 179.97438 * 9 7 6 11 11 H 1.09004 * 112.84979 * 26.92943 * 10 9 7 12 12 C 1.53783 * 113.61595 * 158.12769 * 10 9 7 13 13 C 1.53780 * 87.08055 * 89.20270 * 12 10 9 14 14 H 1.08995 * 113.61840 * 140.06907 * 13 12 10 15 15 N 1.46505 * 113.60931 * 270.88387 * 13 12 10 16 16 C 1.34773 * 120.00333 * 274.80604 * 15 13 12 17 17 O 1.21515 * 119.99867 * 0.02562 * 16 15 13 18 18 O 1.34632 * 120.00353 * 180.02562 * 16 15 13 19 19 C 1.45199 * 117.00295 * 180.02562 * 18 16 15 20 20 C 1.50701 * 109.47369 * 180.02562 * 19 18 16 21 21 C 1.38231 * 120.00243 * 89.99790 * 20 19 18 22 22 C 1.38228 * 120.00233 * 180.02562 * 21 20 19 23 23 C 1.38238 * 119.99893 * 0.02562 * 22 21 20 24 24 C 1.38232 * 120.00091 * 0.25811 * 23 22 21 25 25 C 1.38233 * 119.99609 * 359.48768 * 24 23 22 26 26 C 1.53780 * 87.08268 * 25.43341 * 13 12 10 27 27 C 1.36413 * 105.61376 * 0.25586 * 6 5 4 28 28 O 1.33660 * 108.39822 * 359.58113 * 27 6 5 29 29 H 0.96700 * 114.00200 * 59.99693 * 1 2 3 30 30 H 1.09001 * 109.46863 * 240.00258 * 2 1 3 31 31 H 1.48497 * 109.99799 * 60.00116 * 3 2 1 32 32 H 1.48497 * 110.00108 * 181.32128 * 3 2 1 33 33 H 1.08000 * 127.02686 * 359.97438 * 5 4 2 34 34 H 0.96997 * 120.00498 * 359.97438 * 9 7 6 35 35 H 1.08997 * 113.61118 * 334.64972 * 12 10 9 36 36 H 1.09003 * 113.61443 * 203.75164 * 12 10 9 37 37 H 0.97006 * 119.99471 * 94.81466 * 15 13 12 38 38 H 1.08997 * 109.46755 * 60.00050 * 19 18 16 39 39 H 1.09005 * 109.47120 * 300.00494 * 19 18 16 40 40 H 1.08002 * 120.00057 * 0.02562 * 21 20 19 41 41 H 1.08002 * 120.00158 * 179.97438 * 22 21 20 42 42 H 1.08004 * 119.99729 * 179.97438 * 23 22 21 43 43 H 1.08000 * 120.00237 * 179.71739 * 24 23 22 44 44 H 1.08007 * 119.99979 * 180.23779 * 25 24 23 45 45 H 1.08998 * 113.61605 * 89.11542 * 26 13 12 46 46 H 1.09002 * 113.61664 * 220.01839 * 26 13 12 47 47 H 1.08002 * 125.80185 * 179.73714 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.7551 -2.0122 1.5035 6 6 2.4130 -2.2464 2.7973 7 6 2.5007 -3.5194 3.5348 8 8 1.9923 -4.5243 3.0757 9 7 3.1442 -3.5698 4.7179 10 6 3.2308 -4.8351 5.4512 11 1 3.1811 -5.7068 4.7987 12 6 4.3918 -4.8851 6.4585 13 6 3.4174 -4.2943 7.4912 14 1 3.5193 -4.7282 8.4859 15 7 3.3982 -2.8295 7.5089 16 6 4.3028 -2.1524 8.2435 17 8 5.1347 -2.7570 8.8909 18 8 4.2849 -0.8063 8.2601 19 6 5.2891 -0.1436 9.0729 20 6 5.1142 1.3496 8.9690 21 6 4.2897 2.0125 9.8587 22 6 4.1288 3.3821 9.7630 23 6 4.7921 4.0887 8.7773 24 6 5.6120 3.4251 7.8839 25 6 5.7769 2.0562 7.9828 26 6 2.2828 -4.9153 6.6595 27 6 2.9199 -1.0377 3.1756 28 8 2.6270 -0.1421 2.2276 29 1 -0.3933 0.4417 -0.7650 30 1 1.7923 -0.5138 -0.8900 31 1 1.5616 2.4678 1.2085 32 1 3.5347 1.7702 -0.0322 33 1 1.2359 -2.7395 0.8970 34 1 3.5500 -2.7685 5.0839 35 1 5.2174 -4.2196 6.2065 36 1 4.7199 -5.8969 6.6968 37 1 2.7343 -2.3469 6.9918 38 1 6.2825 -0.4189 8.7189 39 1 5.1758 -0.4509 10.1125 40 1 3.7712 1.4604 10.6286 41 1 3.4843 3.8999 10.4579 42 1 4.6660 5.1588 8.7023 43 1 6.1265 3.9765 7.1109 44 1 6.4205 1.5381 7.2872 45 1 2.0344 -5.9353 6.9526 46 1 1.4059 -4.2741 6.5697 47 1 3.4672 -0.8389 4.0851 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12109458_13456056.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:06:44 Heat of formation + Delta-G solvation = -58.373046 kcal Electronic energy + Delta-G solvation = -33309.854556 eV Core-core repulsion = 28620.753831 eV Total energy + Delta-G solvation = -4689.100725 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.145 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -43.79010 -42.02988 -41.03518 -40.16736 -39.34686 -37.99612 -37.35759 -35.09493 -34.34302 -33.64046 -33.02843 -31.97000 -31.85528 -27.80755 -27.02545 -26.88933 -26.12071 -24.58803 -23.65905 -22.84252 -22.30301 -22.18346 -21.15465 -20.82507 -19.77396 -18.98599 -18.74905 -18.26458 -17.82156 -17.51831 -17.37165 -17.22845 -17.06138 -16.45421 -16.35258 -16.18799 -16.00271 -15.94070 -15.82532 -15.47357 -14.80028 -14.75521 -14.50851 -14.23302 -14.18694 -14.15025 -14.00013 -13.79620 -13.65557 -13.52260 -13.36664 -13.11680 -12.74553 -12.27345 -12.20761 -12.15303 -12.12216 -11.70987 -11.67460 -11.57239 -11.12792 -10.92505 -10.58606 -10.42979 -10.18840 -9.97744 -9.96056 -9.85463 -5.15962 0.03278 0.14594 0.34895 0.82650 1.07043 1.12744 1.49973 1.61176 1.70205 1.91510 1.94654 2.25709 2.66911 3.09679 3.14878 3.17736 3.37277 3.46623 3.52977 3.61261 3.66060 3.71110 3.79182 3.93290 3.95247 4.09068 4.12711 4.13087 4.23753 4.30282 4.44220 4.45411 4.51729 4.53391 4.57346 4.61188 4.67842 4.72289 4.78457 4.80969 4.87614 4.96874 5.11456 5.17852 5.23773 5.39169 5.44905 5.45866 5.47077 5.78417 5.90288 6.19038 6.31364 6.41318 7.10395 7.20954 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.543 6.543 2 C -0.036 4.036 3 Si 0.711 3.289 4 C -0.015 4.015 5 C -0.116 4.116 6 C -0.236 4.236 7 C 0.593 3.407 8 O -0.524 6.524 9 N -0.714 5.714 10 C 0.119 3.881 11 H 0.111 0.889 12 C -0.154 4.154 13 C 0.136 3.864 14 H 0.103 0.897 15 N -0.698 5.698 16 C 0.648 3.352 17 O -0.562 6.562 18 O -0.367 6.367 19 C 0.131 3.869 20 C -0.103 4.103 21 C -0.093 4.093 22 C -0.123 4.123 23 C -0.106 4.106 24 C -0.123 4.123 25 C -0.094 4.094 26 C -0.152 4.152 27 C 0.031 3.969 28 O -0.172 6.172 29 H 0.391 0.609 30 H 0.096 0.904 31 H -0.249 1.249 32 H -0.252 1.252 33 H 0.165 0.835 34 H 0.396 0.604 35 H 0.079 0.921 36 H 0.113 0.887 37 H 0.405 0.595 38 H 0.082 0.918 39 H 0.082 0.918 40 H 0.125 0.875 41 H 0.127 0.873 42 H 0.126 0.874 43 H 0.126 0.874 44 H 0.125 0.875 45 H 0.116 0.884 46 H 0.082 0.918 47 H 0.212 0.788 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.194 4.703 -2.398 5.283 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.350 6.350 2 C -0.146 4.146 3 Si 0.610 3.390 4 C -0.063 4.063 5 C -0.136 4.136 6 C -0.241 4.241 7 C 0.380 3.620 8 O -0.400 6.400 9 N -0.367 5.367 10 C 0.014 3.986 11 H 0.129 0.871 12 C -0.194 4.194 13 C 0.032 3.968 14 H 0.121 0.879 15 N -0.358 5.358 16 C 0.401 3.599 17 O -0.450 6.450 18 O -0.281 6.281 19 C 0.057 3.943 20 C -0.104 4.104 21 C -0.111 4.111 22 C -0.141 4.141 23 C -0.124 4.124 24 C -0.141 4.141 25 C -0.112 4.112 26 C -0.191 4.191 27 C -0.039 4.039 28 O -0.068 6.068 29 H 0.240 0.760 30 H 0.114 0.886 31 H -0.173 1.173 32 H -0.177 1.177 33 H 0.183 0.817 34 H 0.231 0.769 35 H 0.098 0.902 36 H 0.131 0.869 37 H 0.241 0.759 38 H 0.100 0.900 39 H 0.101 0.899 40 H 0.143 0.857 41 H 0.145 0.855 42 H 0.144 0.856 43 H 0.144 0.856 44 H 0.143 0.857 45 H 0.134 0.866 46 H 0.100 0.900 47 H 0.228 0.772 Dipole moment (debyes) X Y Z Total from point charges 0.538 4.310 -1.406 4.565 hybrid contribution 0.016 -0.093 0.370 0.382 sum 0.555 4.217 -1.036 4.378 Atomic orbital electron populations 1.86471 1.16281 1.82034 1.50255 1.23820 0.86258 1.11789 0.92704 0.95131 0.80863 0.76091 0.86943 1.21187 1.01226 0.92218 0.91630 1.22498 1.00531 0.95287 0.95237 1.21492 1.09216 0.94130 0.99265 1.17226 0.77711 0.87090 0.79928 1.90827 1.45963 1.35510 1.67694 1.45632 1.57656 1.12039 1.21336 1.21974 0.96214 0.87591 0.92835 0.87071 1.23794 0.97130 1.03437 0.94991 1.21938 0.97332 0.77203 1.00339 0.87860 1.44508 1.34470 1.06293 1.50571 1.18108 0.81417 0.80990 0.79421 1.91047 1.39154 1.68991 1.45776 1.86299 1.56078 1.18647 1.67078 1.21762 0.90062 0.87461 0.95011 1.19488 0.99982 0.93091 0.97793 1.21126 0.96670 0.94744 0.98545 1.21222 0.99932 0.94111 0.98815 1.21321 0.96052 1.00333 0.94701 1.21211 0.99070 0.94359 0.99503 1.21107 0.98814 0.94471 0.96816 1.23793 0.97220 1.03030 0.95064 1.24448 0.99735 0.86855 0.92853 1.83712 1.57586 1.39162 1.26352 0.75958 0.88607 1.17297 1.17694 0.81731 0.76894 0.90191 0.86865 0.75908 0.89971 0.89948 0.85669 0.85496 0.85612 0.85554 0.85748 0.86593 0.89958 0.77202 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.30 12.86 -35.23 -0.45 -0.15 16 2 C -0.04 0.03 2.96 36.00 0.11 0.13 16 3 Si 0.71 -1.13 32.09 -169.99 -5.46 -6.59 16 4 C -0.01 -0.03 6.22 -35.74 -0.22 -0.26 16 5 C -0.12 -0.36 10.90 -37.45 -0.41 -0.77 16 6 C -0.24 -0.54 6.31 -103.27 -0.65 -1.19 16 7 C 0.59 1.71 7.81 -12.54 -0.10 1.61 16 8 O -0.52 -3.50 16.62 5.26 0.09 -3.41 16 9 N -0.71 0.33 4.96 -54.10 -0.27 0.06 16 10 C 0.12 -0.11 4.28 -67.12 -0.29 -0.39 16 11 H 0.11 0.05 7.54 -51.93 -0.39 -0.34 16 12 C -0.15 0.26 7.61 -25.92 -0.20 0.06 16 13 C 0.14 -0.19 4.00 -67.12 -0.27 -0.46 16 14 H 0.10 -0.07 8.04 -51.93 -0.42 -0.49 16 15 N -0.70 0.70 4.34 -57.93 -0.25 0.45 16 16 C 0.65 1.14 8.75 54.05 0.47 1.62 16 17 O -0.56 -2.76 16.07 -19.28 -0.31 -3.07 16 18 O -0.37 -0.43 10.25 -40.30 -0.41 -0.84 16 19 C 0.13 0.07 5.60 36.01 0.20 0.27 16 20 C -0.10 -0.06 5.52 -104.62 -0.58 -0.63 16 21 C -0.09 -0.03 9.70 -39.59 -0.38 -0.41 16 22 C -0.12 0.01 10.05 -39.58 -0.40 -0.39 16 23 C -0.11 0.03 10.05 -39.58 -0.40 -0.37 16 24 C -0.12 0.03 10.05 -39.59 -0.40 -0.37 16 25 C -0.09 -0.01 9.70 -39.58 -0.38 -0.39 16 26 C -0.15 0.33 7.57 -25.92 -0.20 0.13 16 27 C 0.03 0.01 11.61 30.07 0.35 0.36 16 28 O -0.17 -0.39 8.90 7.63 0.07 -0.32 16 29 H 0.39 -2.38 8.74 45.56 0.40 -1.98 16 30 H 0.10 -0.29 7.96 -51.93 -0.41 -0.70 16 31 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 32 H -0.25 -0.30 7.11 56.52 0.40 0.10 16 33 H 0.17 0.47 8.06 -52.49 -0.42 0.04 16 34 H 0.40 -0.94 6.17 -40.82 -0.25 -1.19 16 35 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 36 H 0.11 -0.31 8.14 -51.93 -0.42 -0.74 16 37 H 0.41 -1.03 7.94 -40.82 -0.32 -1.35 16 38 H 0.08 0.01 8.08 -51.93 -0.42 -0.41 16 39 H 0.08 0.04 8.08 -51.93 -0.42 -0.38 16 40 H 0.13 -0.12 8.06 -52.49 -0.42 -0.55 16 41 H 0.13 -0.23 8.06 -52.49 -0.42 -0.65 16 42 H 0.13 -0.25 8.06 -52.48 -0.42 -0.67 16 43 H 0.13 -0.24 8.06 -52.49 -0.42 -0.67 16 44 H 0.12 -0.18 8.06 -52.48 -0.42 -0.60 16 45 H 0.12 -0.39 8.14 -51.93 -0.42 -0.81 16 46 H 0.08 -0.13 8.13 -51.93 -0.42 -0.56 16 47 H 0.21 -0.85 7.47 -52.49 -0.39 -1.24 16 LS Contribution 409.94 15.07 6.18 6.18 Total: 0.00 -12.33 409.94 -10.61 -22.94 By element: Atomic # 1 Polarization: -7.73 SS G_CDS: -6.06 Total: -13.79 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -3.74 Total: -1.45 kcal Atomic # 7 Polarization: 1.03 SS G_CDS: -0.52 Total: 0.51 kcal Atomic # 8 Polarization: -6.78 SS G_CDS: -1.02 Total: -7.80 kcal Atomic # 14 Polarization: -1.13 SS G_CDS: -5.46 Total: -6.59 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -12.33 -10.61 -22.94 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12109458_13456056.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.430 kcal (2) G-P(sol) polarization free energy of solvation -12.330 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.760 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.613 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.943 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.373 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds