Wall clock time and date at job start Sat Mar 6 2021 18:50:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45192 * 1 3 3 C 1.34235 * 116.99746 * 2 1 4 4 O 1.20825 * 119.99849 * 359.97438 * 3 2 1 5 5 C 1.50705 * 119.99681 * 179.97438 * 3 2 1 6 6 H 1.08996 * 112.85108 * 48.80633 * 5 3 2 7 7 C 1.53783 * 113.61025 * 179.97438 * 5 3 2 8 8 C 1.53781 * 87.08167 * 140.06612 * 7 5 3 9 9 H 1.08999 * 113.61244 * 89.11402 * 8 7 5 10 10 N 1.46499 * 113.61317 * 220.01952 * 8 7 5 11 11 C 1.46494 * 120.00015 * 60.00011 * 10 8 7 12 12 C 1.34777 * 119.99576 * 239.99476 * 10 8 7 13 13 O 1.21687 * 120.00523 * 353.78160 * 12 10 8 14 14 C 1.46679 * 119.99604 * 173.77891 * 12 10 8 15 15 C 1.37878 * 126.23355 * 2.95051 * 14 12 10 16 16 C 1.39838 * 107.08206 * 180.02562 * 15 14 12 17 17 C 1.35453 * 107.86588 * 0.02562 * 16 15 14 18 18 C 1.50701 * 125.55909 * 180.02562 * 17 16 15 19 19 O 1.42903 * 109.46799 * 149.98057 * 18 17 16 20 20 Si 1.86295 * 109.47464 * 29.97862 * 18 17 16 21 21 N 1.35529 * 108.87125 * 359.73236 * 17 16 15 22 22 C 1.46499 * 125.67618 * 180.30376 * 21 17 16 23 23 C 1.53781 * 113.69129 * 277.53287 * 5 3 2 24 24 H 1.08998 * 109.47374 * 299.99889 * 1 2 3 25 25 H 1.09000 * 109.47272 * 60.00465 * 1 2 3 26 26 H 1.09004 * 109.47296 * 179.97438 * 1 2 3 27 27 H 1.08997 * 113.61431 * 25.51707 * 7 5 3 28 28 H 1.09004 * 113.61541 * 254.61217 * 7 5 3 29 29 H 1.09000 * 109.47535 * 113.09235 * 11 10 8 30 30 H 1.08998 * 109.47006 * 233.08654 * 11 10 8 31 31 H 1.08994 * 109.47415 * 353.09039 * 11 10 8 32 32 H 1.07994 * 126.45939 * 359.96600 * 15 14 12 33 33 H 1.08000 * 126.06721 * 180.02562 * 16 15 14 34 34 H 1.08997 * 109.47163 * 269.97262 * 18 17 16 35 35 H 0.96706 * 113.99440 * 299.99548 * 19 18 17 36 36 H 1.48492 * 110.00340 * 58.67855 * 20 18 17 37 37 H 1.48502 * 110.00157 * 180.02562 * 20 18 17 38 38 H 1.09004 * 109.47267 * 268.67074 * 22 21 17 39 39 H 1.09001 * 109.47446 * 28.67334 * 22 21 17 40 40 H 1.09003 * 109.47512 * 148.67506 * 22 21 17 41 41 H 1.08991 * 113.61187 * 105.46254 * 23 5 3 42 42 H 1.08999 * 113.61345 * 334.56089 * 23 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4031 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0239 0.6363 -0.7549 7 6 4.1076 2.7143 -0.0001 8 6 5.1819 2.2271 0.9865 9 1 6.0812 1.8484 0.5008 10 7 5.4719 3.1835 2.0577 11 6 4.4082 3.6019 2.9739 12 6 6.7174 3.6784 2.2002 13 8 7.6255 3.2479 1.5139 14 6 6.9784 4.7360 3.1824 15 6 6.0635 5.2754 4.0617 16 6 6.7355 6.2481 4.8084 17 6 8.0204 6.2856 4.3813 18 6 9.0961 7.1946 4.9177 19 8 10.3668 6.5523 4.7960 20 14 8.7575 7.5665 6.7115 21 7 8.1823 5.3677 3.3974 22 6 9.4303 5.0950 2.6802 23 6 4.1924 1.1232 1.3969 24 1 -0.3634 0.5138 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3634 -1.0277 -0.0005 27 1 3.4175 3.4405 0.4293 28 1 4.5098 3.0291 -0.9631 29 1 4.6231 3.2284 3.9751 30 1 4.3549 4.6903 2.9960 31 1 3.4550 3.1983 2.6325 32 1 5.0236 4.9993 4.1554 33 1 6.3063 6.8608 5.5873 34 1 9.1031 8.1244 4.3489 35 1 10.4328 5.7166 5.2781 36 1 8.7138 6.3042 7.4925 37 1 9.8110 8.4626 7.2521 38 1 9.4804 5.7189 1.7878 39 1 10.2780 5.3187 3.3280 40 1 9.4612 4.0444 2.3912 41 1 4.6629 0.1539 1.5614 42 1 3.5255 1.4142 2.2085 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12109654_10803936.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:50:00 Heat of formation + Delta-G solvation = -37.095484 kcal Electronic energy + Delta-G solvation = -26051.283525 eV Core-core repulsion = 22194.692219 eV Total energy + Delta-G solvation = -3856.591307 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.145 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.70458 -41.96226 -40.66460 -39.02299 -37.97296 -37.36422 -35.94892 -33.64366 -31.48749 -29.53039 -28.64379 -27.68845 -27.17654 -26.85767 -26.13215 -23.29285 -22.14744 -21.30983 -20.35326 -20.26057 -18.91966 -18.50599 -18.03493 -17.86946 -17.43643 -17.04581 -16.92335 -16.34598 -16.26572 -15.97712 -15.49192 -15.33355 -15.16164 -14.70376 -14.39158 -14.30530 -14.23573 -14.07192 -13.78801 -13.67480 -13.46781 -13.25128 -13.08736 -13.04029 -12.55718 -12.43200 -12.28139 -12.11405 -11.84568 -11.81234 -11.80664 -11.35959 -11.09775 -10.71531 -9.82490 -9.62136 -9.06779 -4.99279 0.42432 1.09293 1.13365 1.43391 1.62426 1.70191 1.75516 1.94277 2.29047 2.36296 3.04597 3.10990 3.24832 3.48352 3.54480 3.59463 3.67383 3.94120 3.99778 4.03609 4.14097 4.21581 4.30605 4.36613 4.38840 4.40263 4.43886 4.46140 4.49614 4.54012 4.57384 4.63573 4.72070 4.80857 4.83970 5.01965 5.05803 5.16521 5.34800 5.41859 5.74353 6.00286 6.14322 6.18993 6.30473 6.70802 7.12165 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.503 6.503 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.132 4.132 8 C 0.127 3.873 9 H 0.130 0.870 10 N -0.593 5.593 11 C 0.056 3.944 12 C 0.592 3.408 13 O -0.547 6.547 14 C -0.051 4.051 15 C -0.158 4.158 16 C -0.201 4.201 17 C 0.013 3.987 18 C -0.057 4.057 19 O -0.531 6.531 20 Si 0.720 3.280 21 N -0.392 5.392 22 C 0.050 3.950 23 C -0.132 4.132 24 H 0.064 0.936 25 H 0.064 0.936 26 H 0.103 0.897 27 H 0.103 0.897 28 H 0.086 0.914 29 H 0.071 0.929 30 H 0.089 0.911 31 H 0.079 0.921 32 H 0.171 0.829 33 H 0.153 0.847 34 H 0.124 0.876 35 H 0.378 0.622 36 H -0.257 1.257 37 H -0.255 1.255 38 H 0.073 0.927 39 H 0.106 0.894 40 H 0.098 0.902 41 H 0.092 0.908 42 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.337 -0.563 2.570 4.249 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.390 6.390 5 C -0.128 4.128 6 H 0.149 0.851 7 C -0.171 4.171 8 C 0.024 3.976 9 H 0.148 0.852 10 N -0.324 5.324 11 C -0.086 4.086 12 C 0.383 3.617 13 O -0.426 6.426 14 C -0.165 4.165 15 C -0.184 4.184 16 C -0.224 4.224 17 C -0.105 4.105 18 C -0.166 4.166 19 O -0.338 6.338 20 Si 0.618 3.382 21 N -0.065 5.065 22 C -0.090 4.090 23 C -0.170 4.170 24 H 0.083 0.917 25 H 0.083 0.917 26 H 0.122 0.878 27 H 0.122 0.878 28 H 0.105 0.895 29 H 0.089 0.911 30 H 0.107 0.893 31 H 0.097 0.903 32 H 0.188 0.812 33 H 0.171 0.829 34 H 0.141 0.859 35 H 0.227 0.773 36 H -0.181 1.181 37 H -0.179 1.179 38 H 0.092 0.908 39 H 0.124 0.876 40 H 0.116 0.884 41 H 0.111 0.889 42 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -2.322 -0.140 2.445 3.375 hybrid contribution 0.296 -0.945 -0.470 1.096 sum -2.026 -1.085 1.975 3.030 Atomic orbital electron populations 1.23326 0.75909 1.04035 1.02721 1.86522 1.23742 1.33274 1.83776 1.23468 0.91532 0.81440 0.72121 1.90687 1.66936 1.36425 1.45000 1.22309 0.87719 1.01272 1.01530 0.85053 1.23513 0.97605 0.94702 1.01250 1.22574 0.98156 0.88943 0.87976 0.85235 1.47303 1.09024 1.44293 1.31775 1.22598 0.90890 1.01787 0.93357 1.17011 0.82330 0.80706 0.81664 1.90787 1.43189 1.61161 1.47477 1.19973 0.87053 1.03908 1.05558 1.22417 1.00027 0.98777 0.97147 1.20635 0.92555 1.04048 1.05198 1.21088 0.97550 0.97020 0.94841 1.24950 0.81393 0.96472 1.13741 1.86572 1.32773 1.40696 1.73777 0.94362 0.88556 0.83583 0.71714 1.43760 1.08672 1.27223 1.26828 1.22644 0.84059 1.04457 0.97862 1.23459 0.97840 1.00721 0.95015 0.91739 0.91721 0.87835 0.87835 0.89502 0.91068 0.89288 0.90266 0.81201 0.82937 0.85866 0.77330 1.18110 1.17949 0.90840 0.87607 0.88362 0.88926 0.88586 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.55 101.05 1.07 1.03 16 2 O -0.36 -0.34 10.57 -39.27 -0.41 -0.75 16 3 C 0.47 0.59 7.49 36.01 0.27 0.86 16 4 O -0.50 -1.99 15.65 -18.75 -0.29 -2.28 16 5 C -0.11 0.14 4.26 -90.96 -0.39 -0.25 16 6 H 0.13 -0.39 8.14 -51.93 -0.42 -0.81 16 7 C -0.13 0.09 6.92 -25.92 -0.18 -0.09 16 8 C 0.13 -0.06 4.22 -67.10 -0.28 -0.34 16 9 H 0.13 0.06 7.21 -51.93 -0.37 -0.32 16 10 N -0.59 -0.25 3.08 -174.53 -0.54 -0.79 16 11 C 0.06 -0.13 7.58 59.84 0.45 0.33 16 12 C 0.59 1.93 7.63 -12.85 -0.10 1.83 16 13 O -0.55 -3.26 14.17 5.20 0.07 -3.18 16 14 C -0.05 -0.13 6.83 -81.98 -0.56 -0.69 16 15 C -0.16 -0.04 8.88 -39.11 -0.35 -0.39 16 16 C -0.20 0.04 9.37 -39.98 -0.37 -0.33 16 17 C 0.01 0.01 6.15 -81.95 -0.50 -0.49 16 18 C -0.06 0.04 2.99 36.01 0.11 0.15 16 19 O -0.53 -0.08 9.97 -35.23 -0.35 -0.43 16 20 Si 0.72 -1.29 31.10 -169.99 -5.29 -6.58 16 21 N -0.39 -0.94 3.16 -115.62 -0.37 -1.31 16 22 C 0.05 0.09 10.26 59.85 0.61 0.70 16 23 C -0.13 0.26 7.00 -25.90 -0.18 0.08 16 24 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 25 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 26 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 27 H 0.10 0.03 6.65 -51.93 -0.35 -0.32 16 28 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.07 -0.22 7.42 -51.93 -0.39 -0.61 16 30 H 0.09 -0.25 5.38 -51.93 -0.28 -0.53 16 31 H 0.08 -0.23 5.72 -51.93 -0.30 -0.53 16 32 H 0.17 -0.42 4.06 -52.49 -0.21 -0.63 16 33 H 0.15 -0.48 6.85 -52.49 -0.36 -0.84 16 34 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 35 H 0.38 -0.83 8.39 45.56 0.38 -0.45 16 36 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 37 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 38 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 39 H 0.11 0.03 4.97 -51.93 -0.26 -0.23 16 40 H 0.10 0.28 6.35 -51.93 -0.33 -0.05 16 41 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 42 H 0.10 -0.21 6.14 -51.93 -0.32 -0.53 16 LS Contribution 336.13 15.07 5.07 5.07 Total: 0.00 -9.32 336.13 -7.86 -17.18 By element: Atomic # 1 Polarization: -3.97 SS G_CDS: -5.35 Total: -9.32 kcal Atomic # 6 Polarization: 2.80 SS G_CDS: -0.40 Total: 2.40 kcal Atomic # 7 Polarization: -1.19 SS G_CDS: -0.90 Total: -2.10 kcal Atomic # 8 Polarization: -5.66 SS G_CDS: -0.99 Total: -6.64 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: -5.29 Total: -6.58 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -9.32 -7.86 -17.18 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12109654_10803936.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.918 kcal (2) G-P(sol) polarization free energy of solvation -9.316 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.234 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.861 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.178 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.095 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds