Wall clock time and date at job start Sat Mar 6 2021 18:51:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45193 * 1 3 3 C 1.34231 * 117.00231 * 2 1 4 4 O 1.20823 * 119.99647 * 359.97438 * 3 2 1 5 5 C 1.50701 * 119.99929 * 180.02562 * 3 2 1 6 6 H 1.09000 * 112.84912 * 311.19513 * 5 3 2 7 7 C 1.53777 * 113.61642 * 82.50110 * 5 3 2 8 8 C 1.53781 * 87.08196 * 139.97830 * 7 5 3 9 9 H 1.09000 * 113.61131 * 89.11645 * 8 7 5 10 10 N 1.46498 * 113.61383 * 220.01577 * 8 7 5 11 11 C 1.46500 * 119.99814 * 43.70006 * 10 8 7 12 12 C 1.34778 * 120.00241 * 223.69061 * 10 8 7 13 13 O 1.21285 * 119.99735 * 0.02562 * 12 10 8 14 14 C 1.50698 * 120.00149 * 180.02562 * 12 10 8 15 15 C 1.50702 * 109.47205 * 184.98438 * 14 12 10 16 16 C 1.39314 * 120.06067 * 80.01542 * 15 14 12 17 17 C 1.48393 * 120.11869 * 0.02562 * 16 15 14 18 18 C 1.39334 * 120.11961 * 236.32662 * 17 16 15 19 19 C 1.38019 * 119.87991 * 179.74674 * 18 17 16 20 20 C 1.38330 * 120.11597 * 0.50853 * 19 18 17 21 21 C 1.50694 * 119.87625 * 179.74471 * 20 19 18 22 22 O 1.42895 * 109.47267 * 120.02615 * 21 20 19 23 23 Si 1.86298 * 109.47458 * 0.02562 * 21 20 19 24 24 C 1.38318 * 120.24370 * 359.76984 * 20 19 18 25 25 C 1.38020 * 120.12204 * 359.97126 * 24 20 19 26 26 C 1.39359 * 119.75589 * 180.02562 * 16 15 14 27 27 C 1.37997 * 119.88006 * 0.02562 * 26 16 15 28 28 C 1.38340 * 120.11928 * 359.97438 * 27 26 16 29 29 C 1.38044 * 120.05771 * 259.74088 * 15 14 12 30 30 C 1.53774 * 87.08061 * 334.56995 * 8 7 5 31 31 H 1.08998 * 109.47660 * 180.02562 * 1 2 3 32 32 H 1.09005 * 109.47300 * 300.00219 * 1 2 3 33 33 H 1.08996 * 109.47084 * 60.00133 * 1 2 3 34 34 H 1.08999 * 113.61447 * 254.53153 * 7 5 3 35 35 H 1.09002 * 113.61332 * 25.42844 * 7 5 3 36 36 H 1.09001 * 109.47554 * 95.03307 * 11 10 8 37 37 H 1.09005 * 109.47105 * 215.03469 * 11 10 8 38 38 H 1.08996 * 109.47151 * 335.03069 * 11 10 8 39 39 H 1.08995 * 109.47125 * 304.98773 * 14 12 10 40 40 H 1.09000 * 109.46671 * 64.98402 * 14 12 10 41 41 H 1.08006 * 120.06282 * 0.02562 * 18 17 16 42 42 H 1.07995 * 119.94580 * 180.27183 * 19 18 17 43 43 H 1.09005 * 109.47167 * 240.02290 * 21 20 19 44 44 H 0.96706 * 113.99686 * 299.99405 * 22 21 20 45 45 H 1.48495 * 110.00166 * 180.02562 * 23 21 20 46 46 H 1.48501 * 110.00094 * 301.32367 * 23 21 20 47 47 H 1.07995 * 119.93832 * 179.97438 * 24 20 19 48 48 H 1.08005 * 120.06430 * 179.97438 * 25 24 20 49 49 H 1.08001 * 120.05656 * 180.02562 * 26 16 15 50 50 H 1.07992 * 119.93777 * 179.97438 * 27 26 16 51 51 H 1.08005 * 119.87667 * 180.02562 * 28 27 26 52 52 H 1.07999 * 119.94545 * 359.97438 * 29 15 14 53 53 H 1.09005 * 113.61371 * 270.88307 * 30 8 7 54 54 H 1.09001 * 113.61912 * 139.98220 * 30 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0239 0.6361 0.7549 7 6 4.1906 1.1236 -1.3978 8 6 5.1807 2.2269 -0.9886 9 1 6.0806 1.8481 -0.5041 10 7 5.4694 3.1832 -2.0602 11 6 4.3800 3.7056 -2.8888 12 6 6.7371 3.5826 -2.2836 13 8 7.6390 3.1498 -1.5977 14 6 7.0340 4.5667 -3.3855 15 6 8.5248 4.7520 -3.5054 16 6 9.2923 3.8107 -4.1879 17 6 8.6447 2.6237 -4.7991 18 6 9.0660 1.3415 -4.4529 19 6 8.4567 0.2409 -5.0205 20 6 7.4364 0.4092 -5.9394 21 6 6.7788 -0.7963 -6.5600 22 8 5.3843 -0.7916 -6.2481 23 14 7.5608 -2.3468 -5.8853 24 6 7.0181 1.6798 -6.2909 25 6 7.6169 2.7874 -5.7255 26 6 10.6704 3.9881 -4.2944 27 6 11.2675 5.0936 -3.7237 28 6 10.5005 6.0251 -3.0471 29 6 9.1315 5.8576 -2.9440 30 6 4.1078 2.7141 -0.0005 31 1 -0.3634 -1.0276 0.0005 32 1 -0.3634 0.5139 0.8900 33 1 -0.3633 0.5138 -0.8900 34 1 4.6608 0.1543 -1.5634 35 1 3.5226 1.4151 -2.2083 36 1 4.0409 4.6593 -2.4842 37 1 4.7364 3.8498 -3.9088 38 1 3.5523 2.9965 -2.8900 39 1 6.6380 4.1877 -4.3276 40 1 6.5664 5.5237 -3.1536 41 1 9.8650 1.2090 -3.7384 42 1 8.7795 -0.7535 -4.7496 43 1 6.9092 -0.7647 -7.6418 44 1 5.1932 -0.8186 -5.3005 45 1 6.9214 -3.5428 -6.4901 46 1 9.0172 -2.3487 -6.1753 47 1 6.2215 1.8055 -7.0092 48 1 7.2898 3.7791 -6.0010 49 1 11.2700 3.2616 -4.8228 50 1 12.3354 5.2317 -3.8053 51 1 10.9718 6.8890 -2.6022 52 1 8.5368 6.5904 -2.4189 53 1 3.4172 3.4404 -0.4291 54 1 4.5112 3.0288 0.9619 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12109654_13158394.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:51:18 Heat of formation + Delta-G solvation = -53.478831 kcal Electronic energy + Delta-G solvation = -38253.260685 eV Core-core repulsion = 33509.178914 eV Total energy + Delta-G solvation = -4744.081771 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.182 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -42.08122 -41.45799 -40.63761 -39.73972 -38.93593 -37.52352 -37.41723 -35.54341 -34.22536 -33.36878 -31.96660 -30.71731 -29.68160 -28.75278 -28.03102 -26.83753 -26.66608 -26.31917 -24.02411 -23.50471 -23.10056 -22.19670 -21.58995 -20.58630 -20.04203 -18.89189 -18.50450 -18.21067 -17.87559 -17.73066 -17.42930 -17.08863 -16.81012 -16.61155 -16.21516 -16.16094 -16.08098 -15.90499 -15.56761 -15.47121 -14.88369 -14.75033 -14.52435 -14.39991 -14.22027 -14.14135 -14.13812 -14.02964 -13.67168 -13.61493 -13.36121 -13.26012 -13.21267 -13.07689 -12.92264 -12.83629 -12.43916 -12.37742 -12.18145 -12.15297 -12.02096 -11.81943 -11.81165 -11.68126 -11.65574 -11.35533 -10.86067 -10.47104 -10.11901 -9.92877 -9.72784 -9.61275 -9.20159 -5.02298 -0.08131 0.40267 0.41646 0.62559 1.09893 1.30550 1.60593 1.63625 1.68372 1.93573 2.10063 2.63858 2.86582 3.26160 3.39923 3.48413 3.58660 3.66651 3.71326 3.75503 3.79832 3.81543 3.92902 3.94929 4.03620 4.07621 4.17471 4.21795 4.29594 4.30988 4.31986 4.38670 4.48275 4.52082 4.53464 4.56990 4.59419 4.62394 4.64452 4.68140 4.72245 4.72645 4.84854 4.87730 4.92406 4.98981 5.01221 5.04499 5.11150 5.21220 5.35885 5.37083 5.42664 5.49429 5.54214 5.57934 5.59543 5.67227 5.95159 6.05822 6.38908 6.69030 6.76335 7.19905 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.361 6.361 3 C 0.472 3.528 4 O -0.538 6.538 5 C -0.105 4.105 6 H 0.149 0.851 7 C -0.120 4.120 8 C 0.123 3.877 9 H 0.115 0.885 10 N -0.601 5.601 11 C 0.064 3.936 12 C 0.520 3.480 13 O -0.568 6.568 14 C -0.108 4.108 15 C -0.063 4.063 16 C -0.049 4.049 17 C -0.041 4.041 18 C -0.107 4.107 19 C -0.116 4.116 20 C -0.120 4.120 21 C -0.065 4.065 22 O -0.550 6.550 23 Si 0.761 3.239 24 C -0.091 4.091 25 C -0.115 4.115 26 C -0.120 4.120 27 C -0.126 4.126 28 C -0.125 4.125 29 C -0.119 4.119 30 C -0.131 4.131 31 H 0.127 0.873 32 H 0.058 0.942 33 H 0.062 0.938 34 H 0.108 0.892 35 H 0.098 0.902 36 H 0.066 0.934 37 H 0.089 0.911 38 H 0.083 0.917 39 H 0.123 0.877 40 H 0.123 0.877 41 H 0.122 0.878 42 H 0.137 0.863 43 H 0.109 0.891 44 H 0.394 0.606 45 H -0.297 1.297 46 H -0.291 1.291 47 H 0.137 0.863 48 H 0.140 0.860 49 H 0.127 0.873 50 H 0.139 0.861 51 H 0.140 0.860 52 H 0.137 0.863 53 H 0.092 0.908 54 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.581 -0.079 -0.012 2.582 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.277 6.277 3 C 0.317 3.683 4 O -0.427 6.427 5 C -0.124 4.124 6 H 0.166 0.834 7 C -0.158 4.158 8 C 0.019 3.981 9 H 0.133 0.867 10 N -0.333 5.333 11 C -0.078 4.078 12 C 0.310 3.690 13 O -0.446 6.446 14 C -0.147 4.147 15 C -0.064 4.064 16 C -0.049 4.049 17 C -0.042 4.042 18 C -0.125 4.125 19 C -0.134 4.134 20 C -0.120 4.120 21 C -0.176 4.176 22 O -0.358 6.358 23 Si 0.668 3.332 24 C -0.109 4.109 25 C -0.133 4.133 26 C -0.138 4.138 27 C -0.144 4.144 28 C -0.143 4.143 29 C -0.137 4.137 30 C -0.170 4.170 31 H 0.146 0.854 32 H 0.077 0.923 33 H 0.081 0.919 34 H 0.126 0.874 35 H 0.117 0.883 36 H 0.085 0.915 37 H 0.107 0.893 38 H 0.102 0.898 39 H 0.141 0.859 40 H 0.141 0.859 41 H 0.140 0.860 42 H 0.155 0.845 43 H 0.127 0.873 44 H 0.243 0.757 45 H -0.225 1.225 46 H -0.218 1.218 47 H 0.155 0.845 48 H 0.158 0.842 49 H 0.145 0.855 50 H 0.156 0.844 51 H 0.157 0.843 52 H 0.155 0.845 53 H 0.111 0.889 54 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -1.965 -0.725 -0.484 2.150 hybrid contribution -0.115 0.557 -0.225 0.612 sum -2.081 -0.168 -0.709 2.205 Atomic orbital electron populations 1.23511 0.75143 1.05542 1.02387 1.86523 1.24626 1.33075 1.83457 1.23964 0.92413 0.81011 0.70950 1.90668 1.67863 1.37458 1.46753 1.22407 0.85985 1.01133 1.02867 0.83373 1.23391 0.97197 1.01012 0.94241 1.22453 0.97593 0.89697 0.88321 0.86667 1.47775 1.07011 1.44414 1.34057 1.22069 0.90118 1.00172 0.95400 1.20763 0.81979 0.81674 0.84617 1.90706 1.45823 1.57828 1.50283 1.20953 0.93506 1.00799 0.99439 1.19472 0.94598 0.94439 0.97862 1.18724 0.93409 0.93944 0.98830 1.18849 0.96387 0.92182 0.96734 1.21226 1.00048 0.91676 0.99535 1.21057 0.96537 0.98821 0.96940 1.20406 0.97450 0.95987 0.98165 1.25006 0.86390 1.03237 1.02925 1.86469 1.20852 1.97046 1.31388 0.93824 0.75885 0.73839 0.89658 1.21037 0.99432 0.91177 0.99248 1.21366 0.95799 0.99671 0.96441 1.21357 0.93681 0.98536 1.00210 1.21355 1.00936 0.94346 0.97794 1.21470 0.94000 0.99901 0.98885 1.21226 0.95472 0.97688 0.99276 1.23429 0.97497 0.94992 1.01068 0.85449 0.92291 0.91897 0.87379 0.88333 0.91504 0.89259 0.89801 0.85943 0.85879 0.86035 0.84527 0.87333 0.75655 1.22451 1.21826 0.84545 0.84231 0.85460 0.84353 0.84262 0.84547 0.88928 0.89958 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 113.37 1.20 1.12 16 2 O -0.36 -0.29 10.56 -51.43 -0.54 -0.83 16 3 C 0.47 0.88 7.48 71.24 0.53 1.41 16 4 O -0.54 -4.34 15.65 21.97 0.34 -3.99 16 5 C -0.10 0.40 4.26 -11.02 -0.05 0.36 16 6 H 0.15 -1.10 8.14 -2.39 -0.02 -1.12 16 7 C -0.12 0.75 7.12 31.12 0.22 0.97 16 8 C 0.12 -0.29 4.24 45.52 0.19 -0.10 16 9 H 0.12 0.09 7.18 -2.39 -0.02 0.07 16 10 N -0.60 1.19 3.09 -819.66 -2.53 -1.34 16 11 C 0.06 -0.46 9.17 127.77 1.17 0.71 16 12 C 0.52 1.50 7.45 87.66 0.65 2.15 16 13 O -0.57 -6.36 15.48 -3.04 -0.05 -6.41 16 14 C -0.11 0.16 4.06 29.10 0.12 0.28 16 15 C -0.06 -0.20 4.39 -19.65 -0.09 -0.29 16 16 C -0.05 -0.23 5.37 -20.04 -0.11 -0.33 16 17 C -0.04 -0.12 4.73 -20.04 -0.09 -0.22 16 18 C -0.11 -0.35 9.62 22.48 0.22 -0.13 16 19 C -0.12 -0.06 8.66 22.24 0.19 0.14 16 20 C -0.12 0.06 5.40 -19.83 -0.11 -0.05 16 21 C -0.06 0.09 2.82 71.23 0.20 0.29 16 22 O -0.55 1.02 12.76 -148.98 -1.90 -0.88 16 23 Si 0.76 -1.22 29.78 68.60 2.04 0.82 16 24 C -0.09 0.08 9.59 22.24 0.21 0.29 16 25 C -0.12 0.04 7.84 22.48 0.18 0.22 16 26 C -0.12 -0.52 9.62 22.48 0.22 -0.31 16 27 C -0.13 -0.37 10.03 22.24 0.22 -0.14 16 28 C -0.12 -0.30 10.04 22.31 0.22 -0.08 16 29 C -0.12 -0.32 9.66 22.24 0.21 -0.11 16 30 C -0.13 0.27 6.99 31.12 0.22 0.48 16 31 H 0.13 -1.00 8.14 -2.39 -0.02 -1.02 16 32 H 0.06 -0.09 8.13 -2.38 -0.02 -0.11 16 33 H 0.06 -0.15 8.13 -2.39 -0.02 -0.17 16 34 H 0.11 -0.97 8.14 -2.39 -0.02 -0.99 16 35 H 0.10 -0.66 5.94 -2.39 -0.01 -0.68 16 36 H 0.07 -0.52 8.14 -2.39 -0.02 -0.54 16 37 H 0.09 -0.90 6.51 -2.38 -0.02 -0.92 16 38 H 0.08 -0.67 5.79 -2.39 -0.01 -0.69 16 39 H 0.12 -0.59 3.87 -2.39 -0.01 -0.60 16 40 H 0.12 -0.72 8.00 -2.39 -0.02 -0.74 16 41 H 0.12 0.44 8.06 -2.91 -0.02 0.42 16 42 H 0.14 -0.35 4.86 -2.91 -0.01 -0.37 16 43 H 0.11 -0.04 7.96 -2.38 -0.02 -0.06 16 44 H 0.39 -3.73 8.70 -74.05 -0.64 -4.37 16 45 H -0.30 -1.63 7.11 99.48 0.71 -0.93 16 46 H -0.29 -1.13 7.11 99.48 0.71 -0.42 16 47 H 0.14 -0.39 8.06 -2.91 -0.02 -0.41 16 48 H 0.14 -0.52 7.08 -2.91 -0.02 -0.54 16 49 H 0.13 0.30 8.06 -2.91 -0.02 0.27 16 50 H 0.14 -0.14 8.06 -2.91 -0.02 -0.17 16 51 H 0.14 -0.24 8.06 -2.91 -0.02 -0.26 16 52 H 0.14 -0.15 8.03 -2.91 -0.02 -0.18 16 53 H 0.09 0.02 6.75 -2.38 -0.02 0.00 16 54 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 Total: 0.00 -24.04 438.58 3.44 -20.61 By element: Atomic # 1 Polarization: -14.98 SS G_CDS: 0.33 Total: -14.64 kcal Atomic # 6 Polarization: 0.93 SS G_CDS: 5.74 Total: 6.67 kcal Atomic # 7 Polarization: 1.19 SS G_CDS: -2.53 Total: -1.34 kcal Atomic # 8 Polarization: -9.97 SS G_CDS: -2.15 Total: -12.12 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: 2.04 Total: 0.82 kcal Total: -24.04 3.44 -20.61 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12109654_13158394.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.873 kcal (2) G-P(sol) polarization free energy of solvation -24.042 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.915 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.436 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.606 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.479 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds