Wall clock time and date at job start Sat Mar 6 2021 18:51:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45209 * 1 3 3 C 1.34224 * 116.99852 * 2 1 4 4 O 1.20822 * 120.00501 * 359.97438 * 3 2 1 5 5 C 1.50702 * 119.99985 * 180.02562 * 3 2 1 6 6 H 1.09001 * 112.85102 * 48.79745 * 5 3 2 7 7 C 1.53785 * 113.61677 * 179.97438 * 5 3 2 8 8 C 1.53783 * 87.07664 * 139.98051 * 7 5 3 9 9 H 1.08994 * 113.61340 * 89.20664 * 8 7 5 10 10 N 1.46505 * 113.61244 * 220.01829 * 8 7 5 11 11 C 1.46506 * 119.99804 * 54.21174 * 10 8 7 12 12 C 1.34775 * 120.00137 * 234.21642 * 10 8 7 13 13 O 1.21581 * 119.99780 * 11.50768 * 12 10 8 14 14 C 1.47564 * 119.99827 * 191.50919 * 12 10 8 15 15 C 1.40209 * 120.11950 * 156.06059 * 14 12 10 16 16 O 1.35644 * 120.00406 * 0.02562 * 15 14 12 17 17 C 1.38817 * 119.99433 * 180.02562 * 15 14 12 18 18 C 1.37770 * 120.24449 * 0.02562 * 17 15 14 19 19 C 1.39845 * 120.24742 * 0.02562 * 18 17 15 20 20 C 1.47817 * 120.00281 * 179.97438 * 19 18 17 21 21 C 1.35940 * 125.92805 * 359.97438 * 20 19 18 22 22 C 1.40965 * 106.73826 * 179.75634 * 21 20 19 23 23 C 1.34712 * 107.03253 * 0.37218 * 22 21 20 24 24 C 1.50696 * 125.66584 * 179.88702 * 23 22 21 25 25 O 1.42903 * 109.46748 * 64.71736 * 24 23 22 26 26 Si 1.86303 * 109.47104 * 184.71659 * 24 23 22 27 27 O 1.34339 * 108.66565 * 359.62622 * 23 22 21 28 28 C 1.39173 * 119.99779 * 0.25007 * 19 18 17 29 29 C 1.53776 * 87.17624 * 334.61255 * 8 7 5 30 30 H 1.09000 * 109.47043 * 300.00463 * 1 2 3 31 31 H 1.08999 * 109.46672 * 60.00649 * 1 2 3 32 32 H 1.09003 * 109.46831 * 180.02562 * 1 2 3 33 33 H 1.08999 * 113.61056 * 25.43660 * 7 5 3 34 34 H 1.08995 * 113.61667 * 254.52657 * 7 5 3 35 35 H 1.08994 * 109.47304 * 247.83314 * 11 10 8 36 36 H 1.09005 * 109.46915 * 7.83994 * 11 10 8 37 37 H 1.08999 * 109.46968 * 127.83338 * 11 10 8 38 38 H 0.96706 * 113.99645 * 270.01567 * 16 15 14 39 39 H 1.08005 * 119.88129 * 179.97438 * 17 15 14 40 40 H 1.08005 * 119.87971 * 179.97438 * 18 17 15 41 41 H 1.07998 * 126.62864 * 359.96519 * 21 20 19 42 42 H 1.08008 * 126.48376 * 180.25842 * 22 21 20 43 43 H 1.09001 * 109.47254 * 304.71989 * 24 23 22 44 44 H 0.96705 * 114.00127 * 60.00341 * 25 24 23 45 45 H 1.48499 * 110.00049 * 180.02562 * 26 24 23 46 46 H 1.48507 * 109.99808 * 301.32149 * 26 24 23 47 47 H 1.07993 * 120.12378 * 179.73083 * 28 19 18 48 48 H 1.08994 * 113.61399 * 139.94386 * 29 8 7 49 49 H 1.09005 * 113.61256 * 270.84202 * 29 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2749 -0.0006 6 1 4.0234 0.6364 -0.7566 7 6 4.1078 2.7142 -0.0011 8 6 5.1815 2.2269 0.9862 9 1 6.0816 1.8496 0.5011 10 7 5.4710 3.1834 2.0575 11 6 4.3833 3.6991 2.8927 12 6 6.7377 3.5891 2.2746 13 8 7.6057 3.3324 1.4629 14 6 7.0712 4.3446 3.4975 15 6 8.3834 4.3404 3.9913 16 8 9.3494 3.6415 3.3444 17 6 8.6941 5.0516 5.1423 18 6 7.7168 5.7627 5.8036 19 6 6.4044 5.7731 5.3206 20 6 5.3601 6.5374 6.0348 21 6 5.5402 7.2688 7.1664 22 6 4.2877 7.8276 7.4923 23 6 3.4130 7.4072 6.5580 24 6 1.9478 7.7558 6.5062 25 8 1.7998 9.1601 6.2866 26 14 1.1359 6.8206 5.1144 27 8 4.0650 6.6304 5.6771 28 6 6.0805 5.0590 4.1709 29 6 4.1938 1.1222 1.3970 30 1 -0.3633 0.5139 0.8899 31 1 -0.3632 0.5137 -0.8901 32 1 -0.3633 -1.0277 0.0005 33 1 3.4175 3.4405 0.4279 34 1 4.5106 3.0289 -0.9638 35 1 4.2420 4.7608 2.6906 36 1 3.4636 3.1602 2.6650 37 1 4.6352 3.5597 3.9440 38 1 9.4427 2.7276 3.6465 39 1 9.7055 5.0468 5.5212 40 1 7.9650 6.3137 6.6988 41 1 6.4649 7.3995 7.7088 42 1 4.0702 8.4697 8.3331 43 1 1.4760 7.4840 7.4504 44 1 2.1969 9.4733 5.4624 45 1 -0.3094 7.1560 5.0522 46 1 1.7912 7.1584 3.8252 47 1 5.0667 5.0620 3.7986 48 1 4.6658 0.1536 1.5613 49 1 3.5270 1.4125 2.2090 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12109654_13259648.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:51:22 Heat of formation + Delta-G solvation = -74.200689 kcal Electronic energy + Delta-G solvation = -36425.262995 eV Core-core repulsion = 31482.219651 eV Total energy + Delta-G solvation = -4943.043344 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.149 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -43.69230 -42.25473 -41.56259 -40.23086 -38.94235 -38.23849 -37.92083 -37.44061 -35.88204 -34.16047 -32.76036 -32.38149 -30.09831 -29.47114 -28.54216 -27.10796 -26.83238 -26.33306 -24.97474 -23.69559 -23.02908 -22.34237 -21.54751 -20.91221 -20.39393 -19.27171 -19.09436 -18.88621 -18.27756 -18.09532 -17.66161 -17.47410 -17.45331 -16.98294 -16.89873 -16.44942 -16.33324 -16.13767 -15.95203 -15.79577 -15.28228 -15.00699 -14.49569 -14.39305 -14.37014 -14.29423 -14.17307 -13.94782 -13.79008 -13.68003 -13.63329 -13.53632 -13.29987 -13.11668 -12.96478 -12.90884 -12.51566 -12.35818 -12.17762 -12.16338 -11.83698 -11.77574 -11.71235 -11.41391 -11.05314 -10.83739 -10.79455 -10.46245 -10.19657 -9.78980 -8.87794 -4.99773 -0.54360 -0.16370 0.77859 1.05835 1.15131 1.46506 1.47509 1.58296 1.71017 1.77512 1.91622 1.93995 2.58956 3.09403 3.14167 3.21695 3.25624 3.32522 3.43302 3.61153 3.68953 3.73991 3.87745 3.99007 4.00559 4.04179 4.08018 4.23939 4.27999 4.30460 4.36703 4.37547 4.44680 4.49207 4.50750 4.56362 4.65946 4.66457 4.71028 4.73956 4.81536 4.83360 4.89738 4.90093 5.05374 5.08627 5.14308 5.21810 5.33380 5.45369 5.46780 5.53701 5.99756 6.17700 6.33281 6.65550 6.72366 6.97877 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.361 6.361 3 C 0.473 3.527 4 O -0.536 6.536 5 C -0.103 4.103 6 H 0.151 0.849 7 C -0.134 4.134 8 C 0.122 3.878 9 H 0.121 0.879 10 N -0.598 5.598 11 C 0.052 3.948 12 C 0.559 3.441 13 O -0.554 6.554 14 C -0.178 4.178 15 C 0.162 3.838 16 O -0.496 6.496 17 C -0.148 4.148 18 C -0.047 4.047 19 C -0.043 4.043 20 C 0.026 3.974 21 C -0.190 4.190 22 C -0.180 4.180 23 C -0.054 4.054 24 C -0.035 4.035 25 O -0.536 6.536 26 Si 0.765 3.235 27 O -0.173 6.173 28 C -0.091 4.091 29 C -0.120 4.120 30 H 0.064 0.936 31 H 0.058 0.942 32 H 0.127 0.873 33 H 0.093 0.907 34 H 0.084 0.916 35 H 0.073 0.927 36 H 0.097 0.903 37 H 0.095 0.905 38 H 0.410 0.590 39 H 0.163 0.837 40 H 0.164 0.836 41 H 0.174 0.826 42 H 0.162 0.838 43 H 0.155 0.845 44 H 0.389 0.611 45 H -0.286 1.286 46 H -0.288 1.288 47 H 0.179 0.821 48 H 0.108 0.892 49 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.660 -4.908 5.761 7.748 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.277 6.277 3 C 0.317 3.683 4 O -0.426 6.426 5 C -0.122 4.122 6 H 0.169 0.831 7 C -0.173 4.173 8 C 0.019 3.981 9 H 0.139 0.861 10 N -0.329 5.329 11 C -0.089 4.089 12 C 0.349 3.651 13 O -0.433 6.433 14 C -0.182 4.182 15 C 0.116 3.884 16 O -0.309 6.309 17 C -0.166 4.166 18 C -0.065 4.065 19 C -0.044 4.044 20 C -0.024 4.024 21 C -0.209 4.209 22 C -0.199 4.199 23 C -0.104 4.104 24 C -0.144 4.144 25 O -0.345 6.345 26 Si 0.669 3.331 27 O -0.071 6.071 28 C -0.108 4.108 29 C -0.158 4.158 30 H 0.083 0.917 31 H 0.077 0.923 32 H 0.146 0.854 33 H 0.111 0.889 34 H 0.103 0.897 35 H 0.091 0.909 36 H 0.115 0.885 37 H 0.113 0.887 38 H 0.270 0.730 39 H 0.181 0.819 40 H 0.181 0.819 41 H 0.191 0.809 42 H 0.180 0.820 43 H 0.172 0.828 44 H 0.239 0.761 45 H -0.213 1.213 46 H -0.215 1.215 47 H 0.196 0.804 48 H 0.126 0.874 49 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -2.233 -4.385 4.589 6.729 hybrid contribution 0.145 1.050 -0.282 1.097 sum -2.088 -3.335 4.307 5.834 Atomic orbital electron populations 1.23531 0.75018 1.05581 1.02484 1.86524 1.24736 1.32996 1.83439 1.23897 0.92315 0.81067 0.71038 1.90673 1.67817 1.37413 1.46666 1.22422 0.86201 1.00886 1.02734 0.83137 1.23465 0.97401 0.95181 1.01204 1.22601 0.98103 0.89434 0.88008 0.86142 1.47677 1.06554 1.44556 1.34117 1.22696 0.90826 0.99448 0.95950 1.18350 0.82284 0.78935 0.85542 1.90817 1.48493 1.57410 1.46540 1.20201 0.94584 1.05204 0.98222 1.18841 0.85626 0.93681 0.90249 1.84767 1.53581 1.29513 1.63033 1.21547 1.01736 0.99136 0.94187 1.21429 0.89832 0.95723 0.99558 1.17760 0.91391 0.99200 0.96026 1.20425 0.81851 1.02951 0.97157 1.22144 1.00416 1.00804 0.97536 1.21790 0.92477 1.03805 1.01796 1.23004 0.96573 0.98673 0.92117 1.24495 0.89668 0.86639 1.13599 1.86642 1.80390 1.21075 1.46350 0.93823 0.76206 0.88608 0.74481 1.83902 1.20058 1.56412 1.46742 1.22930 1.01470 0.93175 0.93249 1.23447 0.97083 1.00731 0.94502 0.91704 0.92294 0.85436 0.88891 0.89749 0.90889 0.88493 0.88731 0.72981 0.81938 0.81884 0.80905 0.82032 0.82780 0.76079 1.21304 1.21484 0.80430 0.87371 0.88098 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 113.37 1.20 1.13 16 2 O -0.36 -0.36 10.57 -51.36 -0.54 -0.90 16 3 C 0.47 1.02 7.49 71.24 0.53 1.55 16 4 O -0.54 -4.42 15.65 21.98 0.34 -4.08 16 5 C -0.10 0.33 4.26 -10.95 -0.05 0.29 16 6 H 0.15 -1.06 8.14 -2.39 -0.02 -1.08 16 7 C -0.13 0.10 6.91 31.12 0.22 0.31 16 8 C 0.12 -0.13 4.20 45.52 0.19 0.06 16 9 H 0.12 0.15 7.26 -2.39 -0.02 0.13 16 10 N -0.60 -0.50 3.09 -831.46 -2.57 -3.07 16 11 C 0.05 -0.22 7.54 127.77 0.96 0.74 16 12 C 0.56 3.80 7.43 86.70 0.64 4.44 16 13 O -0.55 -7.94 15.07 15.56 0.23 -7.70 16 14 C -0.18 -0.69 5.76 -20.04 -0.12 -0.80 16 15 C 0.16 0.52 6.69 22.89 0.15 0.67 16 16 O -0.50 -2.35 11.83 -70.05 -0.83 -3.18 16 17 C -0.15 0.27 9.96 22.30 0.22 0.49 16 18 C -0.05 0.16 9.54 22.55 0.22 0.37 16 19 C -0.04 0.02 5.87 -20.13 -0.12 -0.10 16 20 C 0.03 0.00 7.03 24.27 0.17 0.17 16 21 C -0.19 0.28 10.26 22.40 0.23 0.51 16 22 C -0.18 0.10 10.78 22.13 0.24 0.34 16 23 C -0.05 0.03 6.20 24.88 0.15 0.18 16 24 C -0.03 0.09 2.98 71.23 0.21 0.30 16 25 O -0.54 -0.19 12.88 -148.98 -1.92 -2.11 16 26 Si 0.76 -1.79 32.11 68.60 2.20 0.41 16 27 O -0.17 -0.10 8.80 -6.49 -0.06 -0.16 16 28 C -0.09 -0.04 7.54 22.79 0.17 0.13 16 29 C -0.12 0.65 7.06 31.18 0.22 0.87 16 30 H 0.06 -0.17 8.13 -2.39 -0.02 -0.19 16 31 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 32 H 0.13 -1.01 8.14 -2.39 -0.02 -1.03 16 33 H 0.09 0.13 6.56 -2.39 -0.02 0.12 16 34 H 0.08 -0.02 8.14 -2.39 -0.02 -0.04 16 35 H 0.07 -0.30 6.58 -2.39 -0.02 -0.32 16 36 H 0.10 -0.66 5.69 -2.38 -0.01 -0.67 16 37 H 0.09 -0.62 5.99 -2.39 -0.01 -0.63 16 38 H 0.41 -1.62 9.06 -74.05 -0.67 -2.29 16 39 H 0.16 -0.97 8.06 -2.91 -0.02 -0.99 16 40 H 0.16 -1.43 6.96 -2.91 -0.02 -1.45 16 41 H 0.17 -1.10 7.24 -2.91 -0.02 -1.12 16 42 H 0.16 -0.44 8.06 -2.91 -0.02 -0.46 16 43 H 0.15 -0.96 7.96 -2.39 -0.02 -0.98 16 44 H 0.39 -1.72 8.70 -74.05 -0.64 -2.36 16 45 H -0.29 -1.13 7.11 99.48 0.71 -0.42 16 46 H -0.29 -0.99 7.11 99.48 0.71 -0.28 16 47 H 0.18 -0.40 3.05 -5.92 -0.02 -0.42 16 48 H 0.11 -0.86 8.14 -2.39 -0.02 -0.88 16 49 H 0.10 -0.64 6.18 -2.38 -0.01 -0.65 16 Total: 0.00 -27.33 408.46 2.08 -25.25 By element: Atomic # 1 Polarization: -15.91 SS G_CDS: -0.23 Total: -16.14 kcal Atomic # 6 Polarization: 6.22 SS G_CDS: 5.45 Total: 11.67 kcal Atomic # 7 Polarization: -0.50 SS G_CDS: -2.57 Total: -3.07 kcal Atomic # 8 Polarization: -15.36 SS G_CDS: -2.77 Total: -18.13 kcal Atomic # 14 Polarization: -1.79 SS G_CDS: 2.20 Total: 0.41 kcal Total: -27.33 2.08 -25.25 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12109654_13259648.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.950 kcal (2) G-P(sol) polarization free energy of solvation -27.334 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.284 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.084 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.251 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.201 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds