Wall clock time and date at job start Sat Mar 6 2021 18:51:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34233 * 117.00045 * 2 1 4 4 O 1.20827 * 119.99983 * 359.97438 * 3 2 1 5 5 C 1.50696 * 119.99815 * 180.02562 * 3 2 1 6 6 H 1.09001 * 112.84912 * 311.18826 * 5 3 2 7 7 C 1.53780 * 113.69381 * 82.46067 * 5 3 2 8 8 C 1.53782 * 87.08401 * 139.98804 * 7 5 3 9 9 H 1.09001 * 113.68763 * 89.12789 * 8 7 5 10 10 N 1.46494 * 113.61811 * 220.01798 * 8 7 5 11 11 C 1.46507 * 120.00012 * 37.49683 * 10 8 7 12 12 C 1.34780 * 120.00298 * 217.50150 * 10 8 7 13 13 O 1.21577 * 119.99695 * 4.84237 * 12 10 8 14 14 C 1.47599 * 119.99864 * 184.84834 * 12 10 8 15 15 C 1.39714 * 120.09024 * 320.55897 * 14 12 10 16 16 C 1.37722 * 119.90936 * 180.23588 * 15 14 12 17 17 C 1.50703 * 119.95467 * 179.76830 * 16 15 14 18 18 C 1.38977 * 120.08989 * 359.78670 * 16 15 14 19 19 O 1.35705 * 119.91230 * 180.02562 * 18 16 15 20 20 C 1.39019 * 120.17659 * 359.97438 * 18 16 15 21 21 C 1.50695 * 119.95804 * 180.02562 * 20 18 16 22 22 O 1.42910 * 109.46760 * 284.97638 * 21 20 18 23 23 Si 1.86297 * 109.47527 * 164.97760 * 21 20 18 24 24 C 1.37680 * 120.08756 * 359.97438 * 20 18 16 25 25 C 1.53780 * 87.08013 * 334.56904 * 8 7 5 26 26 H 1.09002 * 109.46775 * 59.99959 * 1 2 3 27 27 H 1.08993 * 109.46996 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.46954 * 300.00430 * 1 2 3 29 29 H 1.09003 * 113.61651 * 25.44037 * 7 5 3 30 30 H 1.08999 * 113.61933 * 254.54255 * 7 5 3 31 31 H 1.08994 * 109.47018 * 266.13258 * 11 10 8 32 32 H 1.09007 * 109.46438 * 26.12815 * 11 10 8 33 33 H 1.08991 * 109.47116 * 146.12432 * 11 10 8 34 34 H 1.07997 * 120.04031 * 359.97438 * 15 14 12 35 35 H 1.09000 * 109.46888 * 270.01937 * 17 16 15 36 36 H 1.08998 * 109.46866 * 30.01718 * 17 16 15 37 37 H 1.08992 * 109.47100 * 150.02044 * 17 16 15 38 38 H 0.96705 * 113.99989 * 269.97773 * 19 18 16 39 39 H 1.08999 * 109.46897 * 44.97074 * 21 20 18 40 40 H 0.96697 * 113.99557 * 299.99910 * 22 21 20 41 41 H 1.48496 * 109.99835 * 58.67728 * 23 21 20 42 42 H 1.48496 * 110.00050 * 179.97438 * 23 21 20 43 43 H 1.07997 * 120.04533 * 179.97438 * 24 20 18 44 44 H 1.09004 * 113.61391 * 139.97509 * 25 8 7 45 45 H 1.09000 * 113.61261 * 270.79515 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2094 -0.0005 5 6 3.5664 1.2748 -0.0006 6 1 4.0239 0.6362 0.7550 7 6 4.1926 1.1229 -1.3969 8 6 5.1821 2.2264 -0.9870 9 1 6.0820 1.8493 -0.5011 10 7 5.4723 3.1822 -2.0586 11 6 4.4086 3.6002 -2.9752 12 6 6.7178 3.6770 -2.2014 13 8 7.6199 3.2648 -1.4981 14 6 6.9866 4.7192 -3.2114 15 6 6.3725 4.6550 -4.4647 16 6 6.6297 5.6268 -5.4060 17 6 5.9720 5.5557 -6.7601 18 6 7.4954 6.6727 -5.1091 19 8 7.7458 7.6287 -6.0392 20 6 8.1045 6.7429 -3.8614 21 6 9.0418 7.8795 -3.5445 22 8 10.2878 7.6696 -4.2122 23 14 9.3279 7.9543 -1.7052 24 6 7.8518 5.7759 -2.9146 25 6 4.1078 2.7142 -0.0006 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3633 0.5139 0.8900 29 1 3.5258 1.4139 -2.2085 30 1 4.6631 0.1536 -1.5614 31 1 4.4259 2.9691 -3.8637 32 1 3.4427 3.5030 -2.4793 33 1 4.5656 4.6393 -3.2643 34 1 5.7003 3.8421 -4.6964 35 1 6.6035 4.9854 -7.4412 36 1 5.0024 5.0663 -6.6677 37 1 5.8343 6.5640 -7.1505 38 1 8.4977 7.4306 -6.6141 39 1 8.6022 8.8180 -3.8824 40 1 10.7363 6.8510 -3.9597 41 1 9.8975 6.6689 -1.2272 42 1 10.2512 9.0708 -1.3797 43 1 8.3257 5.8309 -1.9457 44 1 4.5100 3.0294 0.9622 45 1 3.4187 3.4414 -0.4301 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12109654_13287732.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:51:36 Heat of formation + Delta-G solvation = -121.842314 kcal Electronic energy + Delta-G solvation = -29518.128952 eV Core-core repulsion = 25276.380326 eV Total energy + Delta-G solvation = -4241.748626 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.150 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.24059 -41.63675 -40.67725 -39.23129 -37.94489 -37.55155 -37.37409 -35.71323 -34.07265 -31.86939 -29.53790 -28.51143 -28.07380 -27.18912 -26.88594 -26.74891 -24.61316 -22.48275 -22.09828 -20.79530 -20.33678 -19.60477 -18.98763 -18.50821 -18.18689 -17.82730 -17.46056 -17.24087 -16.83091 -16.64024 -16.39373 -16.13621 -15.84071 -15.78830 -15.20799 -14.81916 -14.73372 -14.40294 -14.34564 -14.29483 -14.00763 -13.89454 -13.69637 -13.44434 -13.36444 -13.23932 -13.06361 -12.99637 -12.74819 -12.59803 -12.38549 -12.26741 -11.86079 -11.82302 -11.75669 -11.63917 -11.38872 -10.93252 -10.59500 -9.98094 -9.82646 -9.64390 -4.97377 -0.31734 0.04392 1.10775 1.24938 1.50010 1.59125 1.60145 1.89722 1.95123 2.39587 3.06803 3.10248 3.22043 3.31288 3.34363 3.47836 3.52367 3.62599 3.64074 3.86462 3.94250 4.00716 4.12610 4.16654 4.19984 4.22055 4.30436 4.37596 4.40073 4.47734 4.48602 4.52307 4.55140 4.56720 4.60916 4.66407 4.69701 4.80170 4.98449 5.01613 5.05012 5.08106 5.27124 5.32718 5.38723 5.52555 6.18449 6.33750 6.56605 6.69148 7.01746 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.504 6.504 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.131 4.131 8 C 0.124 3.876 9 H 0.131 0.869 10 N -0.599 5.599 11 C 0.064 3.936 12 C 0.565 3.435 13 O -0.529 6.529 14 C -0.134 4.134 15 C -0.074 4.074 16 C -0.117 4.117 17 C -0.114 4.114 18 C 0.158 3.842 19 O -0.488 6.488 20 C -0.146 4.146 21 C -0.066 4.066 22 O -0.528 6.528 23 Si 0.682 3.318 24 C -0.059 4.059 25 C -0.132 4.132 26 H 0.064 0.936 27 H 0.103 0.897 28 H 0.064 0.936 29 H 0.094 0.906 30 H 0.092 0.908 31 H 0.063 0.937 32 H 0.078 0.922 33 H 0.084 0.916 34 H 0.142 0.858 35 H 0.072 0.928 36 H 0.070 0.930 37 H 0.078 0.922 38 H 0.398 0.602 39 H 0.124 0.876 40 H 0.376 0.624 41 H -0.255 1.255 42 H -0.253 1.253 43 H 0.140 0.860 44 H 0.087 0.913 45 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.778 -2.530 -2.114 5.014 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.314 3.686 4 O -0.391 6.391 5 C -0.128 4.128 6 H 0.150 0.850 7 C -0.169 4.169 8 C 0.020 3.980 9 H 0.149 0.851 10 N -0.331 5.331 11 C -0.078 4.078 12 C 0.354 3.646 13 O -0.405 6.405 14 C -0.137 4.137 15 C -0.092 4.092 16 C -0.118 4.118 17 C -0.171 4.171 18 C 0.113 3.887 19 O -0.300 6.300 20 C -0.147 4.147 21 C -0.176 4.176 22 O -0.334 6.334 23 Si 0.583 3.417 24 C -0.077 4.077 25 C -0.171 4.171 26 H 0.082 0.918 27 H 0.122 0.878 28 H 0.083 0.917 29 H 0.112 0.888 30 H 0.111 0.889 31 H 0.081 0.919 32 H 0.097 0.903 33 H 0.102 0.898 34 H 0.159 0.841 35 H 0.091 0.909 36 H 0.089 0.911 37 H 0.096 0.904 38 H 0.256 0.744 39 H 0.141 0.859 40 H 0.223 0.777 41 H -0.179 1.179 42 H -0.177 1.177 43 H 0.157 0.843 44 H 0.106 0.894 45 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -3.576 -1.643 -1.125 4.092 hybrid contribution 0.711 -0.952 -0.833 1.450 sum -2.865 -2.594 -1.957 4.332 Atomic orbital electron populations 1.23327 0.75900 1.04035 1.02717 1.86524 1.23744 1.33274 1.83771 1.23470 0.91542 0.81440 0.72114 1.90688 1.66950 1.36425 1.45013 1.22310 0.87712 1.01277 1.01520 0.85021 1.23408 0.97800 1.00710 0.95022 1.22585 0.98229 0.89063 0.88093 0.85139 1.47631 1.09344 1.44336 1.31765 1.22223 0.91205 1.01171 0.93228 1.18281 0.82154 0.81340 0.82827 1.90819 1.43733 1.59823 1.46148 1.19707 1.01522 0.97202 0.95285 1.21457 0.97766 0.98263 0.91713 1.20226 0.99691 0.94204 0.97636 1.20731 1.00165 1.03746 0.92431 1.18288 0.94282 0.87463 0.88680 1.84659 1.54485 1.43338 1.47495 1.20523 1.00919 0.98390 0.94862 1.24893 0.84023 0.98840 1.09847 1.86611 1.33732 1.46224 1.66871 0.94869 0.89863 0.81139 0.75814 1.21049 0.95328 0.92041 0.99288 1.23495 0.97602 0.94705 1.01279 0.91762 0.87833 0.91706 0.88755 0.88938 0.91880 0.90304 0.89774 0.84092 0.90924 0.91057 0.90354 0.74364 0.85856 0.77691 1.17948 1.17743 0.84270 0.89392 0.87855 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.25 10.57 -39.27 -0.41 -0.66 16 3 C 0.47 0.45 7.49 36.00 0.27 0.72 16 4 O -0.50 -1.85 15.65 -18.75 -0.29 -2.14 16 5 C -0.11 0.18 4.26 -90.96 -0.39 -0.20 16 6 H 0.13 -0.44 8.14 -51.93 -0.42 -0.86 16 7 C -0.13 0.32 7.04 -25.92 -0.18 0.14 16 8 C 0.12 -0.13 4.22 -67.12 -0.28 -0.42 16 9 H 0.13 -0.02 7.21 -51.93 -0.37 -0.40 16 10 N -0.60 0.26 3.08 -174.21 -0.54 -0.28 16 11 C 0.06 -0.18 7.56 59.85 0.45 0.27 16 12 C 0.56 1.22 7.34 -12.44 -0.09 1.13 16 13 O -0.53 -2.99 16.40 5.30 0.09 -2.90 16 14 C -0.13 -0.12 5.23 -104.96 -0.55 -0.67 16 15 C -0.07 0.07 7.19 -39.22 -0.28 -0.22 16 16 C -0.12 0.08 5.89 -104.54 -0.62 -0.54 16 17 C -0.11 0.26 9.79 36.01 0.35 0.61 16 18 C 0.16 0.05 6.66 -39.02 -0.26 -0.21 16 19 O -0.49 0.05 11.84 -18.82 -0.22 -0.17 16 20 C -0.15 -0.07 5.27 -104.54 -0.55 -0.62 16 21 C -0.07 -0.02 2.37 36.00 0.09 0.07 16 22 O -0.53 -0.48 12.88 -35.23 -0.45 -0.94 16 23 Si 0.68 0.01 30.24 -169.99 -5.14 -5.13 16 24 C -0.06 -0.06 8.24 -39.22 -0.32 -0.38 16 25 C -0.13 0.16 6.92 -25.92 -0.18 -0.02 16 26 H 0.06 -0.08 8.13 -51.93 -0.42 -0.50 16 27 H 0.10 -0.35 8.14 -51.93 -0.42 -0.78 16 28 H 0.06 -0.06 8.13 -51.93 -0.42 -0.49 16 29 H 0.09 -0.25 6.59 -51.93 -0.34 -0.59 16 30 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 31 H 0.06 -0.27 6.93 -51.93 -0.36 -0.63 16 32 H 0.08 -0.24 6.19 -51.92 -0.32 -0.56 16 33 H 0.08 -0.25 5.78 -51.93 -0.30 -0.55 16 34 H 0.14 -0.41 5.33 -52.49 -0.28 -0.69 16 35 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.07 -0.24 8.08 -51.93 -0.42 -0.66 16 37 H 0.08 -0.13 7.52 -51.93 -0.39 -0.52 16 38 H 0.40 -1.28 9.06 45.56 0.41 -0.86 16 39 H 0.12 0.03 7.82 -51.93 -0.41 -0.38 16 40 H 0.38 -0.61 8.70 45.56 0.40 -0.22 16 41 H -0.25 -0.57 6.68 56.52 0.38 -0.20 16 42 H -0.25 -0.75 7.11 56.52 0.40 -0.35 16 43 H 0.14 0.17 4.84 -52.49 -0.25 -0.08 16 44 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 45 H 0.10 -0.03 6.28 -51.93 -0.33 -0.35 16 LS Contribution 367.76 15.07 5.54 5.54 Total: 0.00 -9.51 367.76 -8.06 -17.56 By element: Atomic # 1 Polarization: -6.41 SS G_CDS: -5.14 Total: -11.56 kcal Atomic # 6 Polarization: 2.16 SS G_CDS: -1.48 Total: 0.69 kcal Atomic # 7 Polarization: 0.26 SS G_CDS: -0.54 Total: -0.28 kcal Atomic # 8 Polarization: -5.52 SS G_CDS: -1.30 Total: -6.82 kcal Atomic # 14 Polarization: 0.01 SS G_CDS: -5.14 Total: -5.13 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -9.51 -8.06 -17.56 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12109654_13287732.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.281 kcal (2) G-P(sol) polarization free energy of solvation -9.506 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -113.787 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.055 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.561 kcal (6) G-S(sol) free energy of system = (1) + (5) -121.842 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds