Wall clock time and date at job start Sat Mar 6 2021 18:51:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34234 * 117.00041 * 2 1 4 4 O 1.20825 * 119.99680 * 359.97438 * 3 2 1 5 5 C 1.50699 * 120.00007 * 180.02562 * 3 2 1 6 6 H 1.08998 * 112.90810 * 48.74187 * 5 3 2 7 7 C 1.53781 * 113.61209 * 179.97438 * 5 3 2 8 8 C 1.53784 * 87.17055 * 140.02243 * 7 5 3 9 9 H 1.08999 * 113.61703 * 89.15810 * 8 7 5 10 10 N 1.46513 * 113.61111 * 219.97786 * 8 7 5 11 11 C 1.46492 * 119.99811 * 59.99750 * 10 8 7 12 12 C 1.34774 * 119.99718 * 239.99904 * 10 8 7 13 13 O 1.21620 * 120.00067 * 6.21864 * 12 10 8 14 14 C 1.47381 * 119.99969 * 186.21976 * 12 10 8 15 15 C 1.36414 * 127.19183 * 187.78154 * 14 12 10 16 16 C 1.50700 * 125.80170 * 359.97438 * 15 14 12 17 17 O 1.33650 * 108.39333 * 180.02562 * 15 14 12 18 18 C 1.34210 * 110.91364 * 359.97438 * 17 15 14 19 19 C 1.50694 * 125.44340 * 180.02562 * 18 17 15 20 20 O 1.42905 * 109.47055 * 244.97638 * 19 18 17 21 21 Si 1.86301 * 109.46933 * 4.96803 * 19 18 17 22 22 C 1.34188 * 109.12194 * 359.70643 * 18 17 15 23 23 C 1.53780 * 87.08120 * 334.52294 * 8 7 5 24 24 H 1.09001 * 109.47313 * 60.00119 * 1 2 3 25 25 H 1.08998 * 109.46769 * 180.02562 * 1 2 3 26 26 H 1.08999 * 109.46844 * 300.00139 * 1 2 3 27 27 H 1.08998 * 113.61631 * 25.43107 * 7 5 3 28 28 H 1.09001 * 113.61338 * 254.60538 * 7 5 3 29 29 H 1.09002 * 109.47539 * 95.83839 * 11 10 8 30 30 H 1.09009 * 109.47079 * 215.83070 * 11 10 8 31 31 H 1.08997 * 109.47737 * 335.83347 * 11 10 8 32 32 H 1.08996 * 109.46957 * 90.00212 * 16 15 14 33 33 H 1.09006 * 109.47134 * 210.00115 * 16 15 14 34 34 H 1.09001 * 109.47488 * 329.99799 * 16 15 14 35 35 H 1.08997 * 109.48079 * 124.96992 * 19 18 17 36 36 H 0.96695 * 114.00169 * 59.99470 * 20 19 18 37 37 H 1.48505 * 109.99636 * 58.68784 * 21 19 18 38 38 H 1.48504 * 110.00321 * 179.97438 * 21 19 18 39 39 H 1.08001 * 127.02402 * 180.27017 * 22 18 17 40 40 H 1.09002 * 113.61198 * 139.98849 * 23 8 7 41 41 H 1.09009 * 113.61402 * 270.88376 * 23 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0244 0.6361 -0.7557 7 6 4.1077 2.7143 -0.0011 8 6 5.1830 2.2291 0.9854 9 1 6.0829 1.8517 0.4997 10 7 5.4730 3.1872 2.0552 11 6 4.4096 3.6060 2.9715 12 6 6.7182 3.6832 2.1962 13 8 7.5728 3.4250 1.3703 14 6 7.0443 4.5385 3.3513 15 6 8.1992 5.2330 3.5632 16 6 9.3915 5.2630 2.6420 17 8 8.0940 5.8812 4.7272 18 6 6.9047 5.6437 5.3020 19 6 6.4424 6.2099 6.6198 20 8 6.2739 5.1484 7.5616 21 14 7.7141 7.4116 7.2597 22 6 6.1902 4.8269 4.5127 23 6 4.1946 1.1257 1.3981 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5139 0.8900 27 1 3.4174 3.4406 0.4278 28 1 4.5092 3.0293 -0.9643 29 1 4.4499 2.9997 3.8764 30 1 4.5463 4.6558 3.2313 31 1 3.4412 3.4744 2.4888 32 1 9.2807 6.0817 1.9310 33 1 10.2992 5.4103 3.2272 34 1 9.4570 4.3187 2.1014 35 1 5.4925 6.7261 6.4804 36 1 7.0809 4.6446 7.7348 37 1 7.9217 8.5036 6.2749 38 1 7.2697 7.9777 8.5587 39 1 5.1929 4.4548 4.6949 40 1 4.6660 0.1570 1.5641 41 1 3.5280 1.4178 2.2096 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12109654_13308374.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 18:51:45 Heat of formation + Delta-G solvation = -84.940736 kcal Electronic energy + Delta-G solvation = -26069.227841 eV Core-core repulsion = 22112.843146 eV Total energy + Delta-G solvation = -3956.384694 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -43.77088 -42.02752 -40.80892 -39.09165 -38.08956 -37.35480 -35.84368 -33.94183 -33.09101 -29.74573 -29.29656 -28.43537 -27.21963 -26.87906 -25.50657 -24.24664 -22.82963 -21.74563 -20.44958 -19.77349 -18.97006 -18.58328 -18.12087 -17.86261 -17.63672 -17.42293 -16.91877 -16.55864 -16.40339 -16.10254 -15.84331 -15.62339 -14.76432 -14.58765 -14.35947 -14.26135 -14.20193 -14.14530 -14.09119 -13.84164 -13.65041 -13.37147 -13.04104 -12.93870 -12.82903 -12.65394 -12.51078 -12.23127 -12.15376 -11.82138 -11.80445 -11.36089 -10.96856 -10.79646 -10.63105 -9.80539 -9.48603 -5.08588 0.29541 0.84370 1.09313 1.13068 1.40695 1.59941 1.73662 1.88346 2.00006 2.28592 3.13379 3.15025 3.25111 3.36856 3.56113 3.59946 3.67867 3.77927 3.96134 4.01699 4.12390 4.14251 4.20881 4.21642 4.33227 4.35679 4.40397 4.46481 4.52088 4.54414 4.57196 4.60117 4.62368 4.71395 4.79627 4.85361 5.06815 5.13169 5.21887 5.35722 5.47346 5.92874 6.30786 6.33667 6.71298 7.15415 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.472 3.528 4 O -0.504 6.504 5 C -0.109 4.109 6 H 0.132 0.868 7 C -0.133 4.133 8 C 0.127 3.873 9 H 0.130 0.870 10 N -0.598 5.598 11 C 0.063 3.937 12 C 0.596 3.404 13 O -0.537 6.537 14 C -0.252 4.252 15 C 0.096 3.904 16 C -0.089 4.089 17 O -0.168 6.168 18 C -0.059 4.059 19 C -0.027 4.027 20 O -0.531 6.531 21 Si 0.703 3.297 22 C -0.161 4.161 23 C -0.131 4.131 24 H 0.064 0.936 25 H 0.103 0.897 26 H 0.063 0.937 27 H 0.101 0.899 28 H 0.087 0.913 29 H 0.063 0.937 30 H 0.084 0.916 31 H 0.075 0.925 32 H 0.090 0.910 33 H 0.083 0.917 34 H 0.113 0.887 35 H 0.133 0.867 36 H 0.384 0.616 37 H -0.254 1.254 38 H -0.247 1.247 39 H 0.171 0.829 40 H 0.092 0.908 41 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.769 -2.102 1.988 2.994 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.315 3.685 4 O -0.391 6.391 5 C -0.128 4.128 6 H 0.150 0.850 7 C -0.171 4.171 8 C 0.024 3.976 9 H 0.148 0.852 10 N -0.330 5.330 11 C -0.079 4.079 12 C 0.387 3.613 13 O -0.416 6.416 14 C -0.256 4.256 15 C 0.043 3.957 16 C -0.145 4.145 17 O -0.065 6.065 18 C -0.107 4.107 19 C -0.138 4.138 20 O -0.336 6.336 21 Si 0.603 3.397 22 C -0.180 4.180 23 C -0.169 4.169 24 H 0.083 0.917 25 H 0.122 0.878 26 H 0.082 0.918 27 H 0.120 0.880 28 H 0.105 0.895 29 H 0.082 0.918 30 H 0.103 0.897 31 H 0.094 0.906 32 H 0.109 0.891 33 H 0.102 0.898 34 H 0.131 0.869 35 H 0.150 0.850 36 H 0.232 0.768 37 H -0.178 1.178 38 H -0.171 1.171 39 H 0.189 0.811 40 H 0.111 0.889 41 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 0.739 -0.698 1.947 2.197 hybrid contribution -1.210 -0.267 -0.443 1.316 sum -0.471 -0.965 1.505 1.849 Atomic orbital electron populations 1.23325 0.75933 1.04029 1.02699 1.86523 1.23722 1.33273 1.83777 1.23480 0.91559 0.81426 0.72081 1.90685 1.66960 1.36457 1.45047 1.22362 0.87650 1.01302 1.01527 0.85004 1.23486 0.97660 0.94629 1.01336 1.22539 0.98113 0.88937 0.88060 0.85244 1.47464 1.09266 1.44427 1.31814 1.22369 0.91003 1.01153 0.93385 1.17223 0.81631 0.78687 0.83794 1.90761 1.47322 1.60252 1.43277 1.21059 0.96765 1.08598 0.99210 1.22909 0.96856 0.91040 0.84896 1.20730 0.91589 1.06166 0.95983 1.83660 1.34857 1.57881 1.30104 1.22697 0.84886 1.04408 0.98721 1.24411 1.08445 0.96841 0.84077 1.86557 1.39360 1.47628 1.60092 0.94170 0.85131 0.79547 0.80873 1.23273 1.01258 1.00529 0.92898 1.23467 0.97847 1.00701 0.94935 0.91721 0.87820 0.91786 0.88041 0.89480 0.91848 0.89718 0.90585 0.89113 0.89831 0.86864 0.84982 0.76778 1.17765 1.17076 0.81146 0.88936 0.88803 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.44 10.57 -39.27 -0.41 -0.85 16 3 C 0.47 0.77 7.49 36.01 0.27 1.04 16 4 O -0.50 -2.22 15.65 -18.75 -0.29 -2.52 16 5 C -0.11 0.11 4.27 -90.82 -0.39 -0.28 16 6 H 0.13 -0.37 8.14 -51.93 -0.42 -0.79 16 7 C -0.13 0.04 6.91 -25.92 -0.18 -0.14 16 8 C 0.13 -0.03 4.18 -67.11 -0.28 -0.32 16 9 H 0.13 0.04 7.28 -51.93 -0.38 -0.34 16 10 N -0.60 -0.44 3.08 -174.28 -0.54 -0.97 16 11 C 0.06 -0.09 7.38 59.84 0.44 0.36 16 12 C 0.60 1.77 7.65 -12.54 -0.10 1.68 16 13 O -0.54 -2.81 14.35 5.26 0.08 -2.74 16 14 C -0.25 -0.52 6.06 -103.28 -0.63 -1.14 16 15 C 0.10 0.15 7.37 -34.97 -0.26 -0.11 16 16 C -0.09 0.03 9.97 36.01 0.36 0.38 16 17 O -0.17 -0.17 8.90 7.67 0.07 -0.11 16 18 C -0.06 -0.02 6.18 -35.74 -0.22 -0.24 16 19 C -0.03 0.03 2.97 36.00 0.11 0.14 16 20 O -0.53 0.60 12.88 -35.23 -0.45 0.14 16 21 Si 0.70 -0.95 32.09 -169.99 -5.46 -6.41 16 22 C -0.16 -0.08 8.75 -37.45 -0.33 -0.40 16 23 C -0.13 0.22 7.04 -25.78 -0.18 0.04 16 24 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 25 H 0.10 -0.31 8.14 -51.93 -0.42 -0.74 16 26 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 27 H 0.10 0.09 6.30 -51.93 -0.33 -0.24 16 28 H 0.09 -0.04 8.14 -51.93 -0.42 -0.46 16 29 H 0.06 -0.15 7.34 -51.93 -0.38 -0.53 16 30 H 0.08 -0.12 5.36 -51.92 -0.28 -0.40 16 31 H 0.08 -0.13 6.12 -51.93 -0.32 -0.45 16 32 H 0.09 -0.08 8.14 -51.93 -0.42 -0.51 16 33 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 34 H 0.11 0.10 6.36 -51.93 -0.33 -0.23 16 35 H 0.13 -0.23 7.96 -51.93 -0.41 -0.64 16 36 H 0.38 -1.80 8.70 45.56 0.40 -1.41 16 37 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 38 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 39 H 0.17 -0.22 4.88 -52.49 -0.26 -0.47 16 40 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 41 H 0.09 -0.15 6.54 -51.92 -0.34 -0.49 16 LS Contribution 340.49 15.07 5.13 5.13 Total: 0.00 -8.65 340.49 -7.40 -16.05 By element: Atomic # 1 Polarization: -4.57 SS G_CDS: -5.20 Total: -9.78 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: -0.31 Total: 2.05 kcal Atomic # 7 Polarization: -0.44 SS G_CDS: -0.54 Total: -0.97 kcal Atomic # 8 Polarization: -5.05 SS G_CDS: -1.02 Total: -6.07 kcal Atomic # 14 Polarization: -0.95 SS G_CDS: -5.46 Total: -6.41 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -8.65 -7.40 -16.05 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12109654_13308374.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.893 kcal (2) G-P(sol) polarization free energy of solvation -8.649 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.543 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.398 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.047 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.941 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds