Wall clock time and date at job start Sun Mar 7 2021 00:52:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.37870 * 126.45613 * 2 1 4 4 C 1.46677 * 126.23502 * 0.02562 * 3 2 1 5 5 O 1.21693 * 120.00050 * 0.02562 * 4 3 2 6 6 N 1.34777 * 119.99924 * 179.97438 * 4 3 2 7 7 C 1.46500 * 119.99979 * 180.02562 * 6 4 3 8 8 H 1.09005 * 112.84759 * 23.80009 * 7 6 4 9 9 C 1.53782 * 113.61648 * 154.99976 * 7 6 4 10 10 C 1.53785 * 87.07924 * 139.97967 * 9 7 6 11 11 H 1.08999 * 113.61070 * 220.01763 * 10 9 7 12 12 O 1.42897 * 113.61254 * 89.20436 * 10 9 7 13 13 C 1.42894 * 114.00093 * 150.00022 * 12 10 9 14 14 C 1.53005 * 109.47487 * 59.99251 * 13 12 10 15 15 C 1.53006 * 109.47526 * 179.97438 * 13 12 10 16 16 C 1.52998 * 109.47059 * 299.99772 * 13 12 10 17 17 C 1.53783 * 87.08193 * 334.56577 * 10 9 7 18 18 N 1.37654 * 107.53287 * 179.87747 * 3 2 1 19 19 C 1.35536 * 108.64308 * 0.39546 * 18 3 2 20 20 C 1.50700 * 125.56409 * 179.79192 * 19 18 3 21 21 O 1.42895 * 109.47244 * 64.98398 * 20 19 18 22 22 Si 1.86302 * 109.47020 * 184.98014 * 20 19 18 23 23 C 1.35453 * 108.87146 * 359.75432 * 19 18 3 24 24 H 1.09002 * 109.47152 * 269.70988 * 1 2 3 25 25 H 1.09001 * 109.46980 * 149.71088 * 1 2 3 26 26 H 1.09004 * 109.47113 * 29.71069 * 1 2 3 27 27 H 0.97004 * 120.00258 * 0.02562 * 6 4 3 28 28 H 1.08996 * 113.61600 * 254.52860 * 9 7 6 29 29 H 1.08996 * 113.61251 * 25.43583 * 9 7 6 30 30 H 1.09004 * 109.46611 * 60.00443 * 14 13 12 31 31 H 1.08999 * 109.47416 * 179.97438 * 14 13 12 32 32 H 1.08993 * 109.47145 * 300.00644 * 14 13 12 33 33 H 1.09000 * 109.46812 * 59.99561 * 15 13 12 34 34 H 1.08994 * 109.47233 * 179.97438 * 15 13 12 35 35 H 1.08998 * 109.46554 * 299.99744 * 15 13 12 36 36 H 1.08992 * 109.47541 * 59.99832 * 16 13 12 37 37 H 1.09006 * 109.47393 * 180.02562 * 16 13 12 38 38 H 1.09002 * 109.47273 * 299.99878 * 16 13 12 39 39 H 1.08992 * 113.61487 * 270.88364 * 17 10 9 40 40 H 1.09005 * 113.60736 * 139.97724 * 17 10 9 41 41 H 0.96997 * 125.68165 * 180.17283 * 18 3 2 42 42 H 1.08994 * 109.47042 * 304.98007 * 20 19 18 43 43 H 0.96707 * 114.00439 * 59.99861 * 21 20 19 44 44 H 1.48504 * 110.00101 * 58.68145 * 22 20 19 45 45 H 1.48496 * 109.99982 * 179.97438 * 22 20 19 46 46 H 1.07999 * 126.06995 * 179.97438 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8899 2.5093 0.0005 5 8 0.7027 2.7766 0.0015 6 7 2.8037 3.4999 0.0010 7 6 2.3679 4.8985 0.0021 8 1 1.3646 5.0289 0.4078 9 6 3.4039 5.8662 0.5980 10 6 3.0210 6.8437 -0.5258 11 1 3.8727 7.3733 -0.9527 12 8 1.9408 7.7143 -0.1837 13 6 1.9934 8.9875 -0.8303 14 6 1.9522 8.7914 -2.3472 15 6 0.7945 9.8317 -0.3930 16 6 3.2894 9.7028 -0.4437 17 6 2.5888 5.6136 -1.3413 18 7 3.6284 0.6625 0.0028 19 6 3.6218 -0.6928 -0.0043 20 6 4.8434 -1.5753 -0.0086 21 8 5.5627 -1.3988 1.2134 22 14 4.3222 -3.3565 -0.1707 23 6 2.3380 -1.1247 -0.0062 24 1 -0.3633 -0.0052 1.0277 25 1 -0.3633 -0.8874 -0.5183 26 1 -0.3633 0.8926 -0.5094 27 1 3.7501 3.2868 0.0006 28 1 3.1450 6.2236 1.5946 29 1 4.4295 5.5035 0.5305 30 1 1.0288 8.2819 -2.6227 31 1 1.9919 9.7626 -2.8404 32 1 2.8060 8.1900 -2.6590 33 1 0.8235 9.9714 0.6876 34 1 0.8349 10.8030 -0.8859 35 1 -0.1286 9.3219 -0.6689 36 1 4.1433 9.1014 -0.7555 37 1 3.3294 10.6742 -0.9365 38 1 3.3188 9.8426 0.6370 39 1 3.3916 5.1819 -1.9389 40 1 1.6718 5.7672 -1.9102 41 1 4.4191 1.2243 0.0058 42 1 5.4832 -1.3060 -0.8490 43 1 5.0535 -1.6203 2.0052 44 1 3.5457 -3.5467 -1.4221 45 1 5.5179 -4.2371 -0.1767 46 1 2.0136 -2.1548 -0.0119 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12113340_13940406.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:52:02 Heat of formation + Delta-G solvation = -49.215790 kcal Electronic energy + Delta-G solvation = -25929.851707 eV Core-core repulsion = 22208.567919 eV Total energy + Delta-G solvation = -3721.283788 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.177 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.56646 -41.24157 -39.87672 -38.15886 -37.74752 -34.87304 -33.61552 -33.13444 -31.53600 -28.55375 -28.44731 -28.13713 -27.19521 -26.73255 -25.10031 -22.46781 -21.86843 -21.53797 -20.63290 -19.98204 -19.40708 -18.12856 -17.99367 -16.90843 -16.81471 -16.54669 -16.28369 -15.89601 -15.81683 -15.41013 -15.09787 -14.90134 -14.70101 -14.44739 -14.28111 -14.07363 -13.95491 -13.61027 -13.56358 -13.45002 -13.41400 -13.14425 -12.96057 -12.88542 -12.78435 -12.71962 -12.56258 -12.15976 -12.01543 -11.96800 -11.75306 -11.16583 -10.93250 -10.70222 -10.48846 -10.08878 -9.79838 -9.13470 -5.06269 0.39724 1.11570 1.54522 1.64110 1.84366 2.08724 2.17921 2.39691 2.48494 3.28262 3.41555 3.51950 3.52566 3.74509 3.83096 3.85297 3.90928 3.96204 4.05408 4.16739 4.17743 4.20795 4.37590 4.51236 4.51662 4.58877 4.70574 4.72570 4.75619 4.76869 4.82553 4.86109 4.87506 4.90463 4.99486 5.05355 5.06446 5.13653 5.24585 5.25377 5.29934 5.40157 5.50666 5.68908 5.93533 6.26208 6.31459 6.36998 6.48850 7.20011 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.064 4.064 3 C -0.056 4.056 4 C 0.591 3.409 5 O -0.520 6.520 6 N -0.725 5.725 7 C 0.133 3.867 8 H 0.123 0.877 9 C -0.149 4.149 10 C 0.067 3.933 11 H 0.084 0.916 12 O -0.352 6.352 13 C 0.106 3.894 14 C -0.177 4.177 15 C -0.139 4.139 16 C -0.179 4.179 17 C -0.171 4.171 18 N -0.525 5.525 19 C 0.025 3.975 20 C -0.055 4.055 21 O -0.543 6.543 22 Si 0.721 3.279 23 C -0.200 4.200 24 H 0.070 0.930 25 H 0.065 0.935 26 H 0.081 0.919 27 H 0.393 0.607 28 H 0.086 0.914 29 H 0.094 0.906 30 H 0.065 0.935 31 H 0.067 0.933 32 H 0.058 0.942 33 H 0.064 0.936 34 H 0.072 0.928 35 H 0.065 0.935 36 H 0.059 0.941 37 H 0.068 0.932 38 H 0.065 0.935 39 H 0.089 0.911 40 H 0.081 0.919 41 H 0.415 0.585 42 H 0.114 0.886 43 H 0.384 0.616 44 H -0.253 1.253 45 H -0.253 1.253 46 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.189 0.388 0.530 3.256 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.072 4.072 3 C -0.169 4.169 4 C 0.379 3.621 5 O -0.395 6.395 6 N -0.375 5.375 7 C 0.029 3.971 8 H 0.141 0.859 9 C -0.187 4.187 10 C 0.008 3.992 11 H 0.101 0.899 12 O -0.271 6.271 13 C 0.068 3.932 14 C -0.235 4.235 15 C -0.197 4.197 16 C -0.237 4.237 17 C -0.210 4.210 18 N -0.121 5.121 19 C -0.093 4.093 20 C -0.165 4.165 21 O -0.349 6.349 22 Si 0.620 3.380 23 C -0.225 4.225 24 H 0.089 0.911 25 H 0.083 0.917 26 H 0.100 0.900 27 H 0.226 0.774 28 H 0.104 0.896 29 H 0.113 0.887 30 H 0.084 0.916 31 H 0.086 0.914 32 H 0.077 0.923 33 H 0.083 0.917 34 H 0.091 0.909 35 H 0.084 0.916 36 H 0.078 0.922 37 H 0.087 0.913 38 H 0.084 0.916 39 H 0.108 0.892 40 H 0.099 0.901 41 H 0.253 0.747 42 H 0.131 0.869 43 H 0.232 0.768 44 H -0.177 1.177 45 H -0.178 1.178 46 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 2.788 0.142 -0.228 2.801 hybrid contribution 1.445 0.887 -0.511 1.771 sum 4.233 1.028 -0.739 4.418 Atomic orbital electron populations 1.20399 0.88829 1.03235 1.02599 1.19947 0.96065 0.90340 1.00889 1.20273 0.83518 0.93602 1.19517 1.17067 0.85966 0.82982 0.76125 1.90843 1.15890 1.83118 1.49658 1.45927 1.09016 1.06365 1.76189 1.22538 1.00129 0.77833 0.96611 0.85889 1.23630 0.99312 0.95562 1.00178 1.22724 0.90515 0.89874 0.96063 0.89854 1.87990 1.46124 1.25051 1.67971 1.21580 0.96043 0.83644 0.91975 1.22478 1.02823 1.02675 0.95481 1.21774 0.96764 0.98766 1.02350 1.22472 0.97310 1.01147 1.02726 1.24017 1.02989 0.96435 0.97601 1.41854 1.07126 1.06572 1.56551 1.21095 0.96853 0.83308 1.08082 1.24949 0.92095 1.09246 0.90227 1.86496 1.42029 1.91120 1.15254 0.93992 0.82734 0.73414 0.87836 1.20600 0.90788 0.99052 1.12016 0.91106 0.91653 0.90044 0.77371 0.89558 0.88739 0.91589 0.91439 0.92272 0.91674 0.90940 0.91616 0.92196 0.91278 0.91552 0.89242 0.90065 0.74709 0.86873 0.76830 1.17697 1.17824 0.83185 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.20 9.84 36.01 0.35 0.16 16 2 C -0.06 -0.16 6.21 -104.16 -0.65 -0.80 16 3 C -0.06 -0.12 7.06 -81.98 -0.58 -0.70 16 4 C 0.59 1.87 7.79 -12.85 -0.10 1.77 16 5 O -0.52 -3.42 14.39 5.19 0.07 -3.35 16 6 N -0.72 -0.07 5.35 -54.32 -0.29 -0.36 16 7 C 0.13 0.09 4.18 -67.12 -0.28 -0.19 16 8 H 0.12 0.41 7.46 -51.93 -0.39 0.02 16 9 C -0.15 0.17 7.66 -25.92 -0.20 -0.03 16 10 C 0.07 -0.03 2.88 -25.92 -0.07 -0.10 16 11 H 0.08 -0.12 5.54 -51.93 -0.29 -0.41 16 12 O -0.35 -0.57 9.92 -35.23 -0.35 -0.92 16 13 C 0.11 0.01 1.11 -90.62 -0.10 -0.09 16 14 C -0.18 0.10 8.38 37.16 0.31 0.41 16 15 C -0.14 0.03 8.84 37.16 0.33 0.36 16 16 C -0.18 0.17 8.38 37.16 0.31 0.48 16 17 C -0.17 0.01 7.71 -25.92 -0.20 -0.19 16 18 N -0.52 0.20 5.99 -5.69 -0.03 0.17 16 19 C 0.02 -0.01 6.46 -81.95 -0.53 -0.54 16 20 C -0.05 0.08 3.08 36.01 0.11 0.19 16 21 O -0.54 0.67 12.88 -35.23 -0.45 0.22 16 22 Si 0.72 -1.47 30.56 -169.99 -5.19 -6.67 16 23 C -0.20 -0.10 9.27 -39.98 -0.37 -0.47 16 24 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 25 H 0.06 0.04 8.14 -51.93 -0.42 -0.39 16 26 H 0.08 0.32 6.47 -51.93 -0.34 -0.02 16 27 H 0.39 -1.06 7.86 -40.82 -0.32 -1.38 16 28 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 29 H 0.09 -0.29 8.12 -51.93 -0.42 -0.71 16 30 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 31 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 32 H 0.06 -0.05 7.02 -51.93 -0.36 -0.41 16 33 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 34 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 35 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 36 H 0.06 -0.08 6.24 -51.93 -0.32 -0.41 16 37 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 38 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 39 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.08 0.12 8.14 -51.93 -0.42 -0.30 16 41 H 0.42 -1.15 8.19 -40.82 -0.33 -1.49 16 42 H 0.11 -0.16 7.96 -51.93 -0.41 -0.58 16 43 H 0.38 -1.78 8.70 45.56 0.40 -1.38 16 44 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 45 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 46 H 0.15 -0.24 6.19 -52.49 -0.32 -0.57 16 LS Contribution 369.62 15.07 5.57 5.57 Total: 0.00 -7.52 369.62 -9.73 -17.25 By element: Atomic # 1 Polarization: -4.78 SS G_CDS: -7.39 Total: -12.17 kcal Atomic # 6 Polarization: 1.92 SS G_CDS: -1.66 Total: 0.26 kcal Atomic # 7 Polarization: 0.13 SS G_CDS: -0.32 Total: -0.19 kcal Atomic # 8 Polarization: -3.33 SS G_CDS: -0.73 Total: -4.05 kcal Atomic # 14 Polarization: -1.47 SS G_CDS: -5.19 Total: -6.67 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -7.52 -9.73 -17.25 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12113340_13940406.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.963 kcal (2) G-P(sol) polarization free energy of solvation -7.522 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.486 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.730 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.252 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.216 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds