Wall clock time and date at job start Sun Mar 7 2021 00:53:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.52997 * 109.47241 * 2 1 4 4 C 1.53004 * 109.46836 * 239.99850 * 2 1 3 5 5 O 1.42898 * 109.46841 * 120.00146 * 2 1 3 6 6 C 1.42894 * 114.00197 * 60.00140 * 5 2 1 7 7 H 1.09000 * 112.85073 * 18.79658 * 6 5 2 8 8 C 1.53777 * 113.61843 * 150.00145 * 6 5 2 9 9 C 1.53774 * 87.08652 * 89.19699 * 8 6 5 10 10 H 1.09001 * 113.61547 * 270.80706 * 9 8 6 11 11 N 1.46494 * 113.61976 * 139.98415 * 9 8 6 12 12 C 1.34773 * 120.00500 * 155.00017 * 11 9 8 13 13 O 1.21279 * 119.99797 * 0.02562 * 12 11 9 14 14 C 1.50693 * 120.00337 * 180.02562 * 12 11 9 15 15 O 1.42895 * 109.47532 * 180.02562 * 14 12 11 16 16 C 1.35918 * 117.00285 * 180.02562 * 15 14 12 17 17 C 1.38796 * 120.05958 * 179.97438 * 16 15 14 18 18 Br 1.89097 * 120.03581 * 359.97438 * 17 16 15 19 19 C 1.38236 * 119.92599 * 179.76508 * 17 16 15 20 20 C 1.38238 * 120.04671 * 0.51316 * 19 17 16 21 21 C 1.50705 * 119.94258 * 179.76852 * 20 19 17 22 22 O 1.42894 * 109.47171 * 119.72187 * 21 20 19 23 23 Si 1.86298 * 109.46780 * 359.71628 * 21 20 19 24 24 C 1.38285 * 120.11986 * 359.48748 * 20 19 17 25 25 C 1.38147 * 120.06839 * 0.25389 * 24 20 19 26 26 C 1.53776 * 87.08114 * 25.43343 * 9 8 6 27 27 H 1.09005 * 109.46999 * 300.00700 * 1 2 3 28 28 H 1.09001 * 109.46914 * 59.99657 * 1 2 3 29 29 H 1.08993 * 109.47674 * 179.97438 * 1 2 3 30 30 H 1.09001 * 109.47149 * 180.02562 * 3 2 1 31 31 H 1.09004 * 109.46962 * 299.99961 * 3 2 1 32 32 H 1.08993 * 109.47316 * 59.99898 * 3 2 1 33 33 H 1.08993 * 109.47304 * 300.00612 * 4 2 1 34 34 H 1.09001 * 109.46966 * 60.00525 * 4 2 1 35 35 H 1.09001 * 109.47136 * 179.97438 * 4 2 1 36 36 H 1.09009 * 113.60959 * 334.64551 * 8 6 5 37 37 H 1.09006 * 113.61575 * 203.74865 * 8 6 5 38 38 H 0.97004 * 119.99850 * 335.00318 * 11 9 8 39 39 H 1.09002 * 109.47444 * 59.99844 * 14 12 11 40 40 H 1.09004 * 109.47594 * 300.00083 * 14 12 11 41 41 H 1.08005 * 119.97408 * 180.27592 * 19 17 16 42 42 H 1.09004 * 109.46779 * 239.72510 * 21 20 19 43 43 H 0.96709 * 113.99337 * 180.02562 * 22 21 20 44 44 H 1.48506 * 109.99834 * 60.00830 * 23 21 20 45 45 H 1.48502 * 110.00011 * 181.32094 * 23 21 20 46 46 H 1.07999 * 119.96801 * 180.27901 * 24 20 19 47 47 H 1.08003 * 120.02176 * 180.02562 * 25 24 20 48 48 H 1.08996 * 113.61643 * 89.11416 * 26 9 8 49 49 H 1.08998 * 113.62013 * 220.02096 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2493 5 8 2.0063 -0.6737 1.1668 6 6 1.5847 -2.0355 1.2644 7 1 1.2522 -2.4451 0.3106 8 6 2.5836 -2.9379 2.0078 9 6 1.8409 -2.5617 3.3007 10 1 2.2329 -1.6672 3.7849 11 7 1.6722 -3.6830 4.2282 12 6 1.5202 -3.4499 5.5469 13 8 1.5226 -2.3117 5.9657 14 6 1.3472 -4.6034 6.5010 15 8 1.2057 -4.1035 7.8322 16 6 1.0401 -5.0207 8.8215 17 6 0.8971 -4.6051 10.1380 18 35 0.9330 -2.7617 10.5578 19 6 0.7239 -5.5401 11.1414 20 6 0.7039 -6.8881 10.8354 21 6 0.5203 -7.9056 11.9318 22 8 -0.6616 -8.6685 11.6806 23 14 0.3592 -7.0318 13.5693 24 6 0.8464 -7.3043 9.5244 25 6 1.0143 -6.3739 8.5172 26 6 0.6068 -2.2980 2.4220 27 1 -0.3633 0.5140 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 3.1301 1.4424 -0.0005 31 1 1.6767 1.9563 -0.8900 32 1 1.6767 1.9563 0.8899 33 1 1.6766 -1.7489 -1.2493 34 1 1.6767 -0.2074 -2.1392 35 1 3.1300 -0.7209 -1.2496 36 1 3.6106 -2.5741 1.9725 37 1 2.4978 -3.9926 1.7461 38 1 1.6700 -4.5934 3.8932 39 1 2.2207 -5.2533 6.4475 40 1 0.4561 -5.1694 6.2293 41 1 0.6080 -5.2174 12.1655 42 1 1.3834 -8.5708 11.9584 43 1 -0.8429 -9.3441 12.3484 44 1 -0.8140 -6.1217 13.5460 45 1 0.2095 -8.0254 14.6627 46 1 0.8259 -8.3578 9.2876 47 1 1.1251 -6.6998 7.4935 48 1 -0.0194 -3.1777 2.2735 49 1 0.0378 -1.4178 2.7210 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12113340_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:53:49 Heat of formation + Delta-G solvation = -83.558266 kcal Electronic energy + Delta-G solvation = -30510.708552 eV Core-core repulsion = 26066.635138 eV Total energy + Delta-G solvation = -4444.073414 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.092 amu Computer time = 1.85 seconds Orbital eigenvalues (eV) -41.74511 -41.22950 -40.26936 -39.10100 -38.11454 -37.38599 -34.82081 -33.56366 -33.33229 -32.23614 -30.51954 -29.61022 -28.44177 -28.35839 -26.64829 -26.42254 -25.27661 -23.88824 -22.29659 -21.84493 -21.59891 -20.18705 -19.55692 -18.61503 -18.34199 -17.96963 -17.50789 -17.21626 -16.94772 -16.71481 -16.45697 -16.07860 -15.93394 -15.65641 -15.48817 -15.14081 -14.86745 -14.52518 -14.37480 -14.25151 -14.16559 -13.99563 -13.88516 -13.72450 -13.47280 -13.44555 -13.05923 -12.88609 -12.74078 -12.67287 -12.56879 -12.53080 -12.29992 -12.15340 -11.95199 -11.92567 -11.78829 -11.72851 -11.21822 -11.13430 -10.94928 -10.51307 -10.45313 -10.11304 -10.00072 -9.30307 -4.96428 -0.03133 0.07831 0.62425 1.26541 1.41883 1.43857 1.54547 1.91846 2.37233 2.52178 2.57779 3.30252 3.44683 3.51885 3.57773 3.67972 3.78349 3.79429 3.84472 3.89563 3.96686 4.03109 4.03792 4.07367 4.08054 4.11898 4.27242 4.33306 4.40413 4.63323 4.64538 4.65760 4.69020 4.74923 4.77549 4.79639 4.82635 4.89978 4.91384 4.96529 5.03479 5.04034 5.08889 5.19191 5.30572 5.32291 5.34514 5.43678 5.48785 6.05835 6.38825 6.46790 6.59646 7.15340 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.100 3.900 3 C -0.141 4.141 4 C -0.175 4.175 5 O -0.379 6.379 6 C 0.062 3.938 7 H 0.102 0.898 8 C -0.132 4.132 9 C 0.125 3.875 10 H 0.080 0.920 11 N -0.698 5.698 12 C 0.510 3.490 13 O -0.571 6.571 14 C 0.034 3.966 15 O -0.305 6.305 16 C 0.149 3.851 17 C -0.141 4.141 18 Br -0.049 7.049 19 C -0.057 4.057 20 C -0.114 4.114 21 C -0.064 4.064 22 O -0.554 6.554 23 Si 0.728 3.272 24 C -0.033 4.033 25 C -0.194 4.194 26 C -0.166 4.166 27 H 0.050 0.950 28 H 0.076 0.924 29 H 0.065 0.935 30 H 0.059 0.941 31 H 0.086 0.914 32 H 0.052 0.948 33 H 0.069 0.931 34 H 0.077 0.923 35 H 0.060 0.940 36 H 0.075 0.925 37 H 0.131 0.869 38 H 0.423 0.577 39 H 0.133 0.867 40 H 0.129 0.871 41 H 0.144 0.856 42 H 0.110 0.890 43 H 0.397 0.603 44 H -0.304 1.304 45 H -0.277 1.277 46 H 0.158 0.842 47 H 0.176 0.824 48 H 0.115 0.885 49 H 0.054 0.946 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.158 -9.419 -6.287 11.528 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C 0.061 3.939 3 C -0.198 4.198 4 C -0.232 4.232 5 O -0.298 6.298 6 C 0.003 3.997 7 H 0.120 0.880 8 C -0.170 4.170 9 C 0.020 3.980 10 H 0.098 0.902 11 N -0.352 5.352 12 C 0.296 3.704 13 O -0.449 6.449 14 C -0.043 4.043 15 O -0.217 6.217 16 C 0.101 3.899 17 C -0.221 4.221 18 Br 0.036 6.964 19 C -0.076 4.076 20 C -0.115 4.115 21 C -0.174 4.174 22 O -0.365 6.365 23 Si 0.635 3.365 24 C -0.052 4.052 25 C -0.213 4.213 26 C -0.205 4.205 27 H 0.069 0.931 28 H 0.095 0.905 29 H 0.084 0.916 30 H 0.078 0.922 31 H 0.105 0.895 32 H 0.071 0.929 33 H 0.088 0.912 34 H 0.096 0.904 35 H 0.079 0.921 36 H 0.094 0.906 37 H 0.149 0.851 38 H 0.262 0.738 39 H 0.151 0.849 40 H 0.147 0.853 41 H 0.161 0.839 42 H 0.127 0.873 43 H 0.248 0.752 44 H -0.232 1.232 45 H -0.204 1.204 46 H 0.176 0.824 47 H 0.193 0.807 48 H 0.133 0.867 49 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 1.791 -7.070 -5.496 9.132 hybrid contribution -1.030 -1.304 -0.094 1.665 sum 0.761 -8.375 -5.589 10.097 Atomic orbital electron populations 1.22447 0.95010 1.02920 1.02759 1.21702 0.93641 0.93227 0.85309 1.21808 1.01749 0.93472 1.02812 1.22429 1.01975 1.01340 0.97448 1.87975 1.73875 1.23873 1.44116 1.22885 0.95643 0.82931 0.98198 0.87989 1.23627 0.99337 1.01443 0.92551 1.22396 0.97607 0.89948 0.88093 0.90155 1.45667 1.73223 1.11206 1.05108 1.20608 0.75908 0.89991 0.83860 1.90790 1.50463 1.25504 1.78190 1.22853 1.06956 0.95103 0.79438 1.86246 1.86701 1.33437 1.15347 1.18800 0.94964 0.89193 0.86988 1.21089 1.15619 0.91698 0.93648 1.96760 1.97822 1.07884 1.93953 1.20856 0.96828 0.91824 0.98124 1.19354 1.04281 0.92120 0.95772 1.24631 0.90828 0.97170 1.04816 1.86528 1.44303 1.52723 1.52905 0.94452 0.87631 0.80155 0.74269 1.21230 0.92123 1.01157 0.90655 1.21618 1.07269 0.89628 1.02807 1.24025 0.97324 1.02751 0.96437 0.93091 0.90472 0.91558 0.92207 0.89542 0.92922 0.91212 0.90446 0.92106 0.90577 0.85105 0.73824 0.84916 0.85314 0.83882 0.87264 0.75200 1.23203 1.20361 0.82395 0.80690 0.86724 0.92689 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.18 8.38 71.98 0.60 0.78 16 2 C 0.10 0.04 1.11 -10.79 -0.01 0.02 16 3 C -0.14 -0.10 8.84 71.98 0.64 0.54 16 4 C -0.17 0.53 8.38 71.98 0.60 1.14 16 5 O -0.38 -1.50 9.92 -148.98 -1.48 -2.97 16 6 C 0.06 -0.12 2.88 31.12 0.09 -0.03 16 7 H 0.10 -0.58 5.54 -2.39 -0.01 -0.60 16 8 C -0.13 0.61 7.66 31.12 0.24 0.85 16 9 C 0.12 0.09 4.18 45.51 0.19 0.28 16 10 H 0.08 0.77 7.46 -2.39 -0.02 0.75 16 11 N -0.70 2.49 5.35 -440.08 -2.36 0.14 16 12 C 0.51 1.94 7.91 87.66 0.69 2.63 16 13 O -0.57 -9.60 16.10 16.01 0.26 -9.35 16 14 C 0.03 -0.11 5.22 71.23 0.37 0.26 16 15 O -0.30 -1.99 9.00 -73.59 -0.66 -2.65 16 16 C 0.15 0.63 6.68 22.52 0.15 0.78 16 17 C -0.14 -0.99 6.24 22.40 0.14 -0.85 16 18 Br -0.05 -0.51 33.16 -20.37 -0.68 -1.19 16 19 C -0.06 -0.22 8.40 22.27 0.19 -0.03 16 20 C -0.11 -0.08 5.42 -19.85 -0.11 -0.19 16 21 C -0.06 0.17 2.81 71.24 0.20 0.37 16 22 O -0.55 0.38 12.74 -148.98 -1.90 -1.52 16 23 Si 0.73 -0.75 29.78 68.60 2.04 1.29 16 24 C -0.03 0.08 9.60 22.26 0.21 0.29 16 25 C -0.19 0.54 9.04 22.36 0.20 0.74 16 26 C -0.17 0.17 7.71 31.12 0.24 0.41 16 27 H 0.05 0.10 8.14 -2.38 -0.02 0.08 16 28 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 29 H 0.07 -0.17 7.02 -2.39 -0.02 -0.19 16 30 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 31 H 0.09 -0.23 8.14 -2.38 -0.02 -0.25 16 32 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16 33 H 0.07 -0.35 6.24 -2.39 -0.01 -0.37 16 34 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 35 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 36 H 0.08 -0.15 8.14 -2.38 -0.02 -0.17 16 37 H 0.13 -1.50 8.12 -2.38 -0.02 -1.52 16 38 H 0.42 -5.36 8.73 -92.71 -0.81 -6.17 16 39 H 0.13 -1.42 7.66 -2.39 -0.02 -1.44 16 40 H 0.13 -1.30 7.66 -2.38 -0.02 -1.32 16 41 H 0.14 0.30 4.87 -2.91 -0.01 0.29 16 42 H 0.11 -0.88 7.96 -2.38 -0.02 -0.90 16 43 H 0.40 -3.33 8.74 -74.05 -0.65 -3.98 16 44 H -0.30 -2.36 7.11 99.48 0.71 -1.65 16 45 H -0.28 -0.62 7.11 99.48 0.71 0.09 16 46 H 0.16 -1.06 8.06 -2.91 -0.02 -1.09 16 47 H 0.18 -1.91 6.30 -2.91 -0.02 -1.93 16 48 H 0.11 -0.68 8.14 -2.39 -0.02 -0.70 16 49 H 0.05 0.25 8.14 -2.39 -0.02 0.23 16 Total: 0.00 -29.09 416.54 -0.56 -29.65 By element: Atomic # 1 Polarization: -20.96 SS G_CDS: -0.43 Total: -21.39 kcal Atomic # 6 Polarization: 3.35 SS G_CDS: 4.64 Total: 7.99 kcal Atomic # 7 Polarization: 2.49 SS G_CDS: -2.36 Total: 0.14 kcal Atomic # 8 Polarization: -12.71 SS G_CDS: -3.78 Total: -16.49 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: 2.04 Total: 1.29 kcal Atomic # 35 Polarization: -0.51 SS G_CDS: -0.68 Total: -1.19 kcal Total: -29.09 -0.56 -29.65 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12113340_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.910 kcal (2) G-P(sol) polarization free energy of solvation -29.088 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.998 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.561 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.648 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.558 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.86 seconds