Wall clock time and date at job start Sat Mar 6 2021 16:02:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34232 * 116.99819 * 2 1 4 4 O 1.20829 * 120.00310 * 359.97438 * 3 2 1 5 5 C 1.50710 * 119.99902 * 179.97438 * 3 2 1 6 6 H 1.09000 * 112.84604 * 311.19714 * 5 3 2 7 7 C 1.53775 * 113.68852 * 82.46512 * 5 3 2 8 8 C 1.53775 * 87.08097 * 139.99181 * 7 5 3 9 9 H 1.08996 * 113.69638 * 220.00692 * 8 7 5 10 10 N 1.46506 * 113.61531 * 89.11408 * 8 7 5 11 11 C 1.34775 * 119.99693 * 107.50126 * 10 8 7 12 12 O 1.21693 * 120.00197 * 0.02562 * 11 10 8 13 13 C 1.46676 * 119.99760 * 180.02562 * 11 10 8 14 14 C 1.37872 * 126.23378 * 179.71381 * 13 11 10 15 15 C 1.39839 * 107.08609 * 179.85013 * 14 13 11 16 16 C 1.50698 * 126.06805 * 180.16085 * 15 14 13 17 17 O 1.42896 * 109.47317 * 300.32746 * 16 15 14 18 18 Si 1.86302 * 109.47174 * 180.32847 * 16 15 14 19 19 C 1.35455 * 107.86555 * 0.41732 * 15 14 13 20 20 N 1.35539 * 108.87035 * 359.74447 * 19 15 14 21 21 C 1.53777 * 113.61300 * 180.02562 * 5 3 2 22 22 H 1.09000 * 109.47036 * 179.97438 * 1 2 3 23 23 H 1.09000 * 109.47325 * 300.00299 * 1 2 3 24 24 H 1.09008 * 109.47168 * 60.00265 * 1 2 3 25 25 H 1.09003 * 113.61490 * 25.44628 * 7 5 3 26 26 H 1.09002 * 113.61432 * 254.54438 * 7 5 3 27 27 H 0.97000 * 120.00117 * 287.50478 * 10 8 7 28 28 H 1.08002 * 126.46094 * 0.02562 * 14 13 11 29 29 H 1.09007 * 109.47357 * 60.33230 * 16 15 14 30 30 H 0.96703 * 114.00220 * 179.97438 * 17 16 15 31 31 H 1.48507 * 109.99677 * 60.00100 * 18 16 15 32 32 H 1.48493 * 110.00285 * 181.31777 * 18 16 15 33 33 H 1.07996 * 125.56833 * 179.72034 * 19 15 14 34 34 H 0.96998 * 125.67762 * 179.97438 * 20 19 15 35 35 H 1.09003 * 113.61538 * 105.38916 * 21 5 3 36 36 H 1.09005 * 113.61509 * 334.48527 * 21 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5664 1.2749 0.0006 6 1 4.0233 0.6365 0.7567 7 6 4.1935 1.1226 -1.3952 8 6 5.1827 2.2262 -0.9848 9 1 5.4003 2.9377 -1.7813 10 7 6.3910 1.7177 -0.3306 11 6 7.5684 1.7305 -0.9864 12 8 7.6280 2.1647 -2.1216 13 6 8.7779 1.2209 -0.3316 14 6 10.0413 1.1679 -0.8812 15 6 10.8875 0.6173 0.0865 16 6 12.3662 0.3695 -0.0654 17 8 12.5897 -0.5235 -1.1584 18 14 13.0332 -0.3871 1.5009 19 6 10.1410 0.3409 1.1825 20 7 8.8574 0.7029 0.9413 21 6 4.1077 2.7143 0.0011 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3634 0.5139 0.8899 24 1 -0.3634 0.5138 -0.8901 25 1 3.5273 1.4134 -2.2074 26 1 4.6642 0.1531 -1.5589 27 1 6.3435 1.3719 0.5744 28 1 10.3247 1.4932 -1.8713 29 1 12.8750 1.3140 -0.2580 30 1 13.5218 -0.7279 -1.3151 31 1 12.3474 -1.6757 1.7746 32 1 14.4964 -0.6071 1.3757 33 1 10.5086 -0.0969 2.0988 34 1 8.1177 0.6118 1.5622 35 1 4.5091 3.0294 0.9643 36 1 3.4179 3.4404 -0.4292 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_10543058.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:02:14 Heat of formation + Delta-G solvation = -70.957200 kcal Electronic energy + Delta-G solvation = -21354.719852 eV Core-core repulsion = 17807.735430 eV Total energy + Delta-G solvation = -3546.984423 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.114 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -42.52506 -41.94330 -40.57578 -38.98663 -37.73715 -37.36031 -34.55196 -32.63287 -30.78289 -29.44819 -27.31778 -26.99659 -26.32177 -24.28019 -22.49665 -21.30384 -20.75021 -20.56908 -19.69531 -18.81116 -18.40856 -17.90931 -17.43261 -17.07515 -16.99007 -16.30770 -15.90627 -15.56702 -15.13054 -15.06743 -14.78977 -14.74626 -14.37652 -14.23133 -13.92567 -13.76656 -13.53345 -13.33958 -13.21129 -12.90796 -12.54234 -11.99899 -11.92994 -11.88457 -11.82290 -11.37008 -11.17470 -10.45271 -10.30213 -9.89175 -9.29360 -4.98671 0.40061 1.10775 1.27827 1.54711 1.59551 1.65677 1.85839 1.97222 1.98739 2.33873 3.08658 3.18055 3.44497 3.52797 3.62429 3.74988 3.89318 3.94267 4.06198 4.12456 4.20355 4.28732 4.33379 4.48633 4.54043 4.57298 4.61427 4.68153 4.72862 4.82702 4.91108 5.07762 5.33603 5.34484 5.60626 5.79899 6.18909 6.36361 6.55026 6.68482 7.07710 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.503 6.503 5 C -0.113 4.113 6 H 0.123 0.877 7 C -0.132 4.132 8 C 0.124 3.876 9 H 0.118 0.882 10 N -0.717 5.717 11 C 0.596 3.404 12 O -0.519 6.519 13 C -0.061 4.061 14 C -0.071 4.071 15 C -0.165 4.165 16 C -0.041 4.041 17 O -0.536 6.536 18 Si 0.679 3.321 19 C 0.040 3.960 20 N -0.535 5.535 21 C -0.124 4.124 22 H 0.103 0.897 23 H 0.064 0.936 24 H 0.064 0.936 25 H 0.100 0.900 26 H 0.088 0.912 27 H 0.395 0.605 28 H 0.150 0.850 29 H 0.074 0.926 30 H 0.378 0.622 31 H -0.255 1.255 32 H -0.262 1.262 33 H 0.177 0.823 34 H 0.419 0.581 35 H 0.085 0.915 36 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.465 -1.170 6.093 6.221 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.390 6.390 5 C -0.132 4.132 6 H 0.141 0.859 7 C -0.171 4.171 8 C 0.018 3.982 9 H 0.136 0.864 10 N -0.369 5.369 11 C 0.384 3.616 12 O -0.394 6.394 13 C -0.173 4.173 14 C -0.097 4.097 15 C -0.172 4.172 16 C -0.151 4.151 17 O -0.343 6.343 18 Si 0.580 3.420 19 C -0.097 4.097 20 N -0.132 5.132 21 C -0.162 4.162 22 H 0.122 0.878 23 H 0.083 0.917 24 H 0.083 0.917 25 H 0.119 0.881 26 H 0.106 0.894 27 H 0.229 0.771 28 H 0.168 0.832 29 H 0.092 0.908 30 H 0.225 0.775 31 H -0.180 1.180 32 H -0.187 1.187 33 H 0.194 0.806 34 H 0.256 0.744 35 H 0.104 0.896 36 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -0.142 -1.201 5.647 5.775 hybrid contribution -0.087 -0.726 -0.142 0.745 sum -0.229 -1.927 5.505 5.837 Atomic orbital electron populations 1.23329 0.75894 1.04029 1.02751 1.86518 1.23777 1.33335 1.83788 1.23548 0.91639 0.81452 0.72156 1.90693 1.66954 1.36410 1.44959 1.22654 0.87728 1.01013 1.01834 0.85905 1.23409 0.97815 1.01257 0.94607 1.21809 0.83271 0.96419 0.96658 0.86427 1.45546 1.07674 1.65473 1.18175 1.17019 0.81374 0.77820 0.85413 1.90887 1.85170 1.46080 1.17278 1.20310 0.96052 1.13688 0.87269 1.21212 0.89703 0.99286 0.99546 1.18711 0.94473 1.08849 0.95174 1.24053 0.95363 0.96563 0.99116 1.86614 1.30650 1.66909 1.50089 0.95534 0.79688 0.84513 0.82254 1.21779 0.83252 1.03970 1.00677 1.41865 1.09565 1.48607 1.13143 1.23382 0.96986 0.94811 1.01017 0.87847 0.91724 0.91698 0.88117 0.89371 0.77086 0.83203 0.90843 0.77477 1.17951 1.18738 0.80605 0.74382 0.89589 0.86749 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.36 10.57 -39.26 -0.41 -0.78 16 3 C 0.47 0.56 7.49 36.01 0.27 0.83 16 4 O -0.50 -2.05 15.65 -18.75 -0.29 -2.34 16 5 C -0.11 0.22 4.13 -90.96 -0.38 -0.15 16 6 H 0.12 -0.51 8.14 -51.93 -0.42 -0.93 16 7 C -0.13 0.21 7.43 -25.92 -0.19 0.02 16 8 C 0.12 -0.17 4.33 -67.10 -0.29 -0.46 16 9 H 0.12 0.03 7.46 -51.93 -0.39 -0.35 16 10 N -0.72 1.31 5.26 -54.31 -0.29 1.02 16 11 C 0.60 1.09 7.79 -12.86 -0.10 0.99 16 12 O -0.52 -3.11 16.48 5.20 0.09 -3.03 16 13 C -0.06 -0.06 7.06 -81.98 -0.58 -0.64 16 14 C -0.07 -0.18 10.59 -39.12 -0.41 -0.60 16 15 C -0.17 -0.14 5.47 -105.02 -0.57 -0.71 16 16 C -0.04 0.01 3.01 36.00 0.11 0.11 16 17 O -0.54 -0.86 12.86 -35.23 -0.45 -1.31 16 18 Si 0.68 -1.24 30.59 -169.99 -5.20 -6.44 16 19 C 0.04 -0.07 10.45 -16.91 -0.18 -0.25 16 20 N -0.54 1.35 5.99 -9.39 -0.06 1.30 16 21 C -0.12 0.27 7.15 -25.90 -0.19 0.09 16 22 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 23 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 24 H 0.06 -0.04 8.13 -51.92 -0.42 -0.46 16 25 H 0.10 -0.13 8.10 -51.93 -0.42 -0.55 16 26 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 27 H 0.40 -1.97 7.83 -40.82 -0.32 -2.29 16 28 H 0.15 0.51 8.06 -52.49 -0.42 0.09 16 29 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 30 H 0.38 -0.92 8.74 45.56 0.40 -0.52 16 31 H -0.25 -0.27 7.11 56.52 0.40 0.14 16 32 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 33 H 0.18 -0.85 6.19 -52.49 -0.32 -1.18 16 34 H 0.42 -2.60 8.19 -40.82 -0.33 -2.94 16 35 H 0.09 -0.29 8.14 -51.93 -0.42 -0.72 16 36 H 0.11 -0.11 7.44 -51.93 -0.39 -0.49 16 LS Contribution 315.85 15.07 4.76 4.76 Total: 0.00 -11.16 315.85 -7.64 -18.81 By element: Atomic # 1 Polarization: -7.93 SS G_CDS: -4.34 Total: -12.27 kcal Atomic # 6 Polarization: 1.72 SS G_CDS: -1.44 Total: 0.28 kcal Atomic # 7 Polarization: 2.66 SS G_CDS: -0.34 Total: 2.32 kcal Atomic # 8 Polarization: -6.38 SS G_CDS: -1.08 Total: -7.45 kcal Atomic # 14 Polarization: -1.24 SS G_CDS: -5.20 Total: -6.44 kcal Total LS contribution 4.76 Total: 4.76 kcal Total: -11.16 -7.64 -18.81 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_10543058.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.150 kcal (2) G-P(sol) polarization free energy of solvation -11.163 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.313 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.644 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.807 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.957 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds