Wall clock time and date at job start Sat Mar 6 2021 16:02:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34228 * 117.00054 * 2 1 4 4 O 1.20829 * 119.99770 * 359.97438 * 3 2 1 5 5 C 1.50699 * 120.00150 * 179.97438 * 3 2 1 6 6 H 1.08995 * 112.84989 * 311.19236 * 5 3 2 7 7 C 1.53780 * 113.61284 * 82.50301 * 5 3 2 8 8 C 1.53779 * 87.08150 * 139.98221 * 7 5 3 9 9 H 1.09007 * 113.69151 * 220.00480 * 8 7 5 10 10 N 1.46496 * 113.61687 * 89.11353 * 8 7 5 11 11 C 1.34781 * 120.00145 * 107.50349 * 10 8 7 12 12 O 1.21693 * 119.99800 * 5.08198 * 11 10 8 13 13 C 1.46672 * 120.00121 * 185.08666 * 11 10 8 14 14 C 1.37875 * 126.23534 * 5.50976 * 13 11 10 15 15 C 1.39837 * 107.08775 * 179.73043 * 14 13 11 16 16 C 1.35460 * 107.86195 * 0.41173 * 15 14 13 17 17 C 1.50699 * 125.55940 * 179.84670 * 16 15 14 18 18 O 1.42898 * 109.46741 * 149.69434 * 17 16 15 19 19 Si 1.86296 * 109.47325 * 29.69559 * 17 16 15 20 20 N 1.35533 * 108.86962 * 359.58229 * 16 15 14 21 21 C 1.46501 * 125.67372 * 180.24128 * 20 16 15 22 22 C 1.53777 * 87.08068 * 334.56318 * 8 7 5 23 23 H 1.09000 * 109.46697 * 60.00527 * 1 2 3 24 24 H 1.09003 * 109.47027 * 179.97438 * 1 2 3 25 25 H 1.08994 * 109.47122 * 300.00342 * 1 2 3 26 26 H 1.09000 * 113.62115 * 25.42794 * 7 5 3 27 27 H 1.09004 * 113.61297 * 254.52764 * 7 5 3 28 28 H 0.97003 * 120.00438 * 287.50062 * 10 8 7 29 29 H 1.08001 * 126.45624 * 0.02562 * 14 13 11 30 30 H 1.07998 * 126.07071 * 180.28353 * 15 14 13 31 31 H 1.08999 * 109.46929 * 269.68931 * 17 16 15 32 32 H 0.96705 * 114.00508 * 299.99595 * 18 17 16 33 33 H 1.48499 * 110.00267 * 58.68111 * 19 17 16 34 34 H 1.48504 * 109.99964 * 179.97438 * 19 17 16 35 35 H 1.08996 * 109.47022 * 85.42195 * 21 20 16 36 36 H 1.08998 * 109.47012 * 205.41916 * 21 20 16 37 37 H 1.08994 * 109.47096 * 325.42384 * 21 20 16 38 38 H 1.09003 * 113.61390 * 139.98046 * 22 8 7 39 39 H 1.08997 * 113.61924 * 270.80216 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0233 0.6366 0.7567 7 6 4.1916 1.1232 -1.3961 8 6 5.1814 2.2266 -0.9866 9 1 5.3979 2.9386 -1.7832 10 7 6.3905 1.7179 -0.3343 11 6 7.5671 1.7309 -0.9916 12 8 7.6447 2.2489 -2.0900 13 6 8.7539 1.1207 -0.3830 14 6 8.7901 0.4101 0.7980 15 6 10.1150 0.0084 0.9954 16 6 10.8503 0.4783 -0.0407 17 6 12.3325 0.2781 -0.2253 18 8 12.6389 0.2482 -1.6208 19 14 12.8438 -1.3333 0.5573 20 7 10.0344 1.1529 -0.8870 21 6 10.4469 1.8076 -2.1309 22 6 4.1077 2.7143 0.0004 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3633 0.5139 0.8899 26 1 3.5243 1.4143 -2.2073 27 1 4.6621 0.1539 -1.5610 28 1 6.3443 1.3716 0.5706 29 1 7.9522 0.1989 1.4458 30 1 10.4864 -0.5715 1.8273 31 1 12.8717 1.0990 0.2475 32 1 12.1927 -0.4591 -2.1064 33 1 12.0923 -2.4573 -0.0568 34 1 14.3034 -1.5428 0.3815 35 1 10.4456 1.0799 -2.9423 36 1 9.7517 2.6139 -2.3649 37 1 11.4502 2.2163 -2.0111 38 1 4.5104 3.0294 0.9631 39 1 3.4183 3.4414 -0.4285 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_10803936.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:02:18 Heat of formation + Delta-G solvation = -69.428663 kcal Electronic energy + Delta-G solvation = -23624.144630 eV Core-core repulsion = 19921.688871 eV Total energy + Delta-G solvation = -3702.455759 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -42.64148 -41.93952 -40.58389 -38.99976 -37.90520 -37.32423 -34.74252 -33.60132 -31.41318 -29.45281 -27.62534 -27.39101 -26.96163 -26.29758 -23.47720 -22.48469 -21.61200 -20.63381 -20.32074 -19.07567 -18.72412 -18.18168 -17.80088 -17.37534 -17.08149 -16.95604 -16.37869 -16.07224 -15.68907 -15.42774 -15.03611 -14.94208 -14.77589 -14.41622 -14.29311 -14.22055 -13.81406 -13.77260 -13.52142 -13.26132 -13.16905 -12.96618 -12.86844 -12.42097 -11.97800 -11.95457 -11.84257 -11.79073 -11.33537 -11.17217 -10.86300 -10.23615 -9.76822 -9.12384 -5.00464 0.37061 1.08184 1.14760 1.48075 1.63579 1.68213 1.70725 1.93685 2.27606 2.33560 3.08815 3.13392 3.22047 3.50955 3.53762 3.67218 3.71630 3.94735 3.96104 4.15206 4.23036 4.28348 4.33433 4.38060 4.41825 4.47202 4.51927 4.58105 4.62556 4.67566 4.75531 4.76716 4.89442 4.96952 5.10893 5.37844 5.39251 5.66480 5.94822 6.09965 6.20081 6.38252 6.72239 7.10986 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.504 6.504 5 C -0.112 4.112 6 H 0.126 0.874 7 C -0.132 4.132 8 C 0.125 3.875 9 H 0.116 0.884 10 N -0.704 5.704 11 C 0.595 3.405 12 O -0.543 6.543 13 C -0.055 4.055 14 C -0.133 4.133 15 C -0.198 4.198 16 C 0.015 3.985 17 C -0.057 4.057 18 O -0.533 6.533 19 Si 0.718 3.282 20 N -0.392 5.392 21 C 0.066 3.934 22 C -0.124 4.124 23 H 0.064 0.936 24 H 0.103 0.897 25 H 0.064 0.936 26 H 0.099 0.901 27 H 0.088 0.912 28 H 0.405 0.595 29 H 0.147 0.853 30 H 0.154 0.846 31 H 0.124 0.876 32 H 0.377 0.623 33 H -0.257 1.257 34 H -0.255 1.255 35 H 0.075 0.925 36 H 0.100 0.900 37 H 0.091 0.909 38 H 0.087 0.913 39 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.109 -3.028 4.071 5.075 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.391 6.391 5 C -0.132 4.132 6 H 0.144 0.856 7 C -0.171 4.171 8 C 0.019 3.981 9 H 0.134 0.866 10 N -0.355 5.355 11 C 0.384 3.616 12 O -0.421 6.421 13 C -0.168 4.168 14 C -0.160 4.160 15 C -0.222 4.222 16 C -0.103 4.103 17 C -0.166 4.166 18 O -0.339 6.339 19 Si 0.617 3.383 20 N -0.065 5.065 21 C -0.074 4.074 22 C -0.162 4.162 23 H 0.082 0.918 24 H 0.121 0.879 25 H 0.083 0.917 26 H 0.118 0.882 27 H 0.106 0.894 28 H 0.241 0.759 29 H 0.165 0.835 30 H 0.171 0.829 31 H 0.142 0.858 32 H 0.225 0.775 33 H -0.181 1.181 34 H -0.180 1.180 35 H 0.093 0.907 36 H 0.119 0.881 37 H 0.110 0.890 38 H 0.106 0.894 39 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 0.734 -2.451 2.931 3.890 hybrid contribution -0.742 -0.200 -0.667 1.018 sum -0.008 -2.651 2.263 3.486 Atomic orbital electron populations 1.23323 0.75953 1.04003 1.02722 1.86520 1.23725 1.33352 1.83791 1.23566 0.91670 0.81430 0.72112 1.90691 1.66970 1.36433 1.45005 1.22658 0.87654 1.01050 1.01789 0.85602 1.23413 0.97816 1.01218 0.94668 1.21789 0.83190 0.96397 0.96729 0.86607 1.45269 1.06850 1.64839 1.18530 1.16964 0.81982 0.78228 0.84415 1.90811 1.85066 1.45683 1.20536 1.19969 0.85769 1.12134 0.98974 1.21303 0.97823 1.01139 0.95719 1.20560 0.93199 1.07887 1.00519 1.21143 0.93697 1.01402 0.94073 1.24930 0.90534 1.14255 0.86861 1.86598 1.72443 1.56080 1.18797 0.94431 0.79939 0.73438 0.90532 1.43760 1.05706 1.38492 1.18520 1.22354 1.02776 0.99088 0.83213 1.23367 0.96899 0.94831 1.01117 0.91756 0.87863 0.91721 0.88226 0.89358 0.75933 0.83499 0.82860 0.85846 0.77472 1.18148 1.17957 0.90682 0.88114 0.89019 0.89419 0.86839 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.39 10.57 -39.25 -0.41 -0.80 16 3 C 0.47 0.62 7.48 36.01 0.27 0.89 16 4 O -0.50 -2.12 15.65 -18.75 -0.29 -2.41 16 5 C -0.11 0.20 4.14 -90.96 -0.38 -0.18 16 6 H 0.13 -0.49 8.14 -51.93 -0.42 -0.91 16 7 C -0.13 0.21 7.43 -25.92 -0.19 0.02 16 8 C 0.12 -0.15 4.36 -67.12 -0.29 -0.44 16 9 H 0.12 0.04 7.42 -51.92 -0.39 -0.34 16 10 N -0.70 0.91 5.24 -54.33 -0.28 0.63 16 11 C 0.60 1.15 7.77 -12.85 -0.10 1.05 16 12 O -0.54 -2.77 14.22 5.20 0.07 -2.70 16 13 C -0.05 -0.08 6.88 -81.98 -0.56 -0.64 16 14 C -0.13 0.09 10.35 -39.12 -0.40 -0.31 16 15 C -0.20 0.18 9.37 -39.98 -0.37 -0.20 16 16 C 0.01 0.00 6.15 -81.95 -0.50 -0.50 16 17 C -0.06 0.06 2.90 36.01 0.10 0.17 16 18 O -0.53 0.03 10.49 -35.23 -0.37 -0.34 16 19 Si 0.72 -1.48 31.09 -169.99 -5.28 -6.76 16 20 N -0.39 -0.61 3.16 -115.62 -0.37 -0.98 16 21 C 0.07 0.06 9.27 59.85 0.55 0.62 16 22 C -0.12 0.23 7.15 -25.92 -0.19 0.05 16 23 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 24 H 0.10 -0.31 8.14 -51.93 -0.42 -0.74 16 25 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 26 H 0.10 -0.14 8.09 -51.93 -0.42 -0.56 16 27 H 0.09 -0.14 8.14 -51.93 -0.42 -0.56 16 28 H 0.41 -1.56 7.65 -40.82 -0.31 -1.88 16 29 H 0.15 -0.54 7.49 -52.49 -0.39 -0.93 16 30 H 0.15 -0.57 6.84 -52.49 -0.36 -0.93 16 31 H 0.12 -0.23 7.96 -51.93 -0.41 -0.64 16 32 H 0.38 -0.83 8.70 45.56 0.40 -0.43 16 33 H -0.26 -0.16 7.11 56.52 0.40 0.24 16 34 H -0.25 -0.28 7.11 56.52 0.40 0.13 16 35 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 36 H 0.10 0.24 6.19 -51.93 -0.32 -0.08 16 37 H 0.09 0.04 7.10 -51.93 -0.37 -0.33 16 38 H 0.09 -0.25 8.14 -51.93 -0.42 -0.68 16 39 H 0.11 -0.08 7.44 -51.93 -0.39 -0.47 16 LS Contribution 330.29 15.07 4.98 4.98 Total: 0.00 -9.19 330.29 -8.08 -17.27 By element: Atomic # 1 Polarization: -5.33 SS G_CDS: -5.12 Total: -10.45 kcal Atomic # 6 Polarization: 2.56 SS G_CDS: -1.00 Total: 1.57 kcal Atomic # 7 Polarization: 0.30 SS G_CDS: -0.65 Total: -0.35 kcal Atomic # 8 Polarization: -5.25 SS G_CDS: -1.00 Total: -6.26 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: -5.28 Total: -6.76 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -9.19 -8.08 -17.27 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_10803936.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.159 kcal (2) G-P(sol) polarization free energy of solvation -9.191 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.349 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.079 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.270 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.429 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds