Wall clock time and date at job start Sat Mar 6 2021 16:02:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34224 * 117.00479 * 2 1 4 4 O 1.20825 * 119.99567 * 359.97438 * 3 2 1 5 5 C 1.50704 * 120.00380 * 180.02562 * 3 2 1 6 6 H 1.08996 * 112.84630 * 48.80304 * 5 3 2 7 7 C 1.53779 * 113.61615 * 179.97438 * 5 3 2 8 8 C 1.53775 * 87.07988 * 139.97973 * 7 5 3 9 9 H 1.09005 * 113.61530 * 219.93653 * 8 7 5 10 10 N 1.46498 * 113.61672 * 89.11632 * 8 7 5 11 11 C 1.34779 * 120.00456 * 154.99577 * 10 8 7 12 12 O 1.21624 * 119.99700 * 0.02562 * 11 10 8 13 13 C 1.47296 * 120.00012 * 180.02562 * 11 10 8 14 14 C 1.39808 * 120.13827 * 359.97438 * 13 11 10 15 15 C 1.37585 * 119.96881 * 180.02562 * 14 13 11 16 16 C 1.50694 * 119.88594 * 179.97438 * 15 14 13 17 17 O 1.42894 * 109.47551 * 254.99864 * 16 15 14 18 18 Si 1.86305 * 109.46825 * 14.99940 * 16 15 14 19 19 C 1.39147 * 120.23522 * 359.97438 * 15 14 13 20 20 O 1.35710 * 119.86033 * 180.02562 * 19 15 14 21 21 C 1.42901 * 117.00097 * 180.02562 * 20 19 15 22 22 C 1.38728 * 120.27492 * 0.02562 * 19 15 14 23 23 C 1.38403 * 120.03087 * 359.97438 * 22 19 15 24 24 O 1.35659 * 120.11524 * 180.27655 * 23 22 19 25 25 C 1.42891 * 117.00348 * 359.72214 * 24 23 22 26 26 C 1.53784 * 87.08513 * 334.56644 * 8 7 5 27 27 H 1.08994 * 109.47786 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.46890 * 300.00238 * 1 2 3 29 29 H 1.09006 * 109.46982 * 59.99764 * 1 2 3 30 30 H 1.09008 * 113.61147 * 25.43205 * 7 5 3 31 31 H 1.08996 * 113.61371 * 254.53161 * 7 5 3 32 32 H 0.96998 * 119.99799 * 335.00340 * 10 8 7 33 33 H 1.08001 * 120.01840 * 0.04201 * 14 13 11 34 34 H 1.09002 * 109.47689 * 134.99567 * 16 15 14 35 35 H 0.96701 * 113.99859 * 300.00004 * 17 16 15 36 36 H 1.48496 * 110.00337 * 60.00150 * 18 16 15 37 37 H 1.48503 * 109.99881 * 181.32007 * 18 16 15 38 38 H 1.08999 * 109.47495 * 59.99912 * 21 20 19 39 39 H 1.09004 * 109.47605 * 180.02562 * 21 20 19 40 40 H 1.09004 * 109.46661 * 299.99765 * 21 20 19 41 41 H 1.07997 * 119.98255 * 179.97438 * 22 19 15 42 42 H 1.09001 * 109.47173 * 300.00346 * 25 24 23 43 43 H 1.09004 * 109.47144 * 59.99777 * 25 24 23 44 44 H 1.08996 * 109.47210 * 180.02562 * 25 24 23 45 45 H 1.08994 * 113.61506 * 139.98089 * 26 8 7 46 46 H 1.09000 * 113.61205 * 270.88871 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2092 -0.0005 5 6 3.5664 1.2747 -0.0006 6 1 4.0233 0.6364 -0.7567 7 6 4.1079 2.7140 -0.0011 8 6 5.1815 2.2268 0.9862 9 1 5.3979 2.9391 1.7824 10 7 6.3906 1.7177 0.3342 11 6 7.5672 1.7310 0.9915 12 8 7.6250 2.1653 2.1261 13 6 8.7829 1.2195 0.3357 14 6 8.7196 0.7191 -0.9682 15 6 9.8572 0.2418 -1.5772 16 6 9.7867 -0.2977 -2.9825 17 8 9.8585 -1.7245 -2.9492 18 14 8.1804 0.2250 -3.7684 19 6 11.0727 0.2554 -0.9001 20 8 12.1903 -0.2169 -1.5082 21 6 13.4050 -0.1745 -0.7568 22 6 11.1470 0.7496 0.3940 23 6 10.0095 1.2326 1.0174 24 8 10.0813 1.7215 2.2808 25 6 11.3630 1.7022 2.9121 26 6 4.1917 1.1236 1.3963 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 3.4176 3.4404 0.4279 31 1 4.5106 3.0287 -0.9639 32 1 6.3444 1.3710 -0.5705 33 1 7.7781 0.7075 -1.4973 34 1 10.6205 0.0946 -3.5647 35 1 10.6704 -2.0682 -2.5521 36 1 8.0934 1.7069 -3.8091 37 1 8.0844 -0.3273 -5.1435 38 1 13.2921 -0.7682 0.1503 39 1 14.2187 -0.5802 -1.3581 40 1 13.6310 0.8579 -0.4896 41 1 12.0928 0.7576 0.9153 42 1 11.7217 0.6749 2.9748 43 1 12.0649 2.2971 2.3276 44 1 11.2800 2.1197 3.9155 45 1 4.6620 0.1544 1.5616 46 1 3.5243 1.4153 2.2072 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_12297780.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:02:27 Heat of formation + Delta-G solvation = -160.069697 kcal Electronic energy + Delta-G solvation = -31853.091280 eV Core-core repulsion = 27291.002798 eV Total energy + Delta-G solvation = -4562.088482 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.20744 -41.81424 -40.67817 -40.05713 -38.92842 -38.36109 -37.24523 -36.95795 -34.29549 -32.24421 -31.72696 -29.37218 -29.17017 -28.34756 -26.93612 -26.84408 -26.09816 -24.67476 -23.12463 -22.28744 -21.62252 -20.42138 -20.00227 -19.04340 -18.54435 -18.45102 -17.82069 -17.66897 -17.33296 -17.29618 -17.15574 -16.69379 -16.65365 -16.33266 -15.86514 -15.79605 -15.65689 -15.47805 -14.98960 -14.84119 -14.30309 -14.26949 -14.20520 -14.03511 -13.72798 -13.57150 -13.46527 -13.37207 -13.07961 -12.89355 -12.77826 -12.69754 -12.59350 -12.14987 -11.83176 -11.74180 -11.71778 -11.70094 -11.35100 -11.23917 -11.20816 -10.72153 -10.07227 -9.96111 -9.18692 -5.00342 -0.27503 0.08023 1.22710 1.34435 1.57052 1.76977 1.80665 1.90459 1.97449 2.06268 2.10760 2.64718 3.23708 3.32645 3.39260 3.46830 3.62982 3.66543 3.72818 3.77377 3.87700 3.91703 3.95971 4.02951 4.06110 4.08387 4.09605 4.17108 4.21292 4.28916 4.32269 4.34612 4.48692 4.49922 4.61870 4.65845 4.70775 4.74395 4.78825 4.87601 4.88893 4.97986 5.02243 5.23164 5.45374 5.55205 5.87938 6.21970 6.51471 6.56631 6.80094 7.32876 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.470 3.530 4 O -0.505 6.505 5 C -0.114 4.114 6 H 0.128 0.872 7 C -0.126 4.126 8 C 0.125 3.875 9 H 0.115 0.885 10 N -0.717 5.717 11 C 0.570 3.430 12 O -0.513 6.513 13 C -0.206 4.206 14 C 0.001 3.999 15 C -0.190 4.190 16 C -0.065 4.065 17 O -0.535 6.535 18 Si 0.733 3.267 19 C 0.208 3.792 20 O -0.309 6.309 21 C 0.023 3.977 22 C -0.309 4.309 23 C 0.233 3.767 24 O -0.273 6.273 25 C 0.018 3.982 26 C -0.132 4.132 27 H 0.103 0.897 28 H 0.063 0.937 29 H 0.064 0.936 30 H 0.112 0.888 31 H 0.087 0.913 32 H 0.398 0.602 33 H 0.141 0.859 34 H 0.075 0.925 35 H 0.366 0.634 36 H -0.246 1.246 37 H -0.252 1.252 38 H 0.061 0.939 39 H 0.108 0.892 40 H 0.060 0.940 41 H 0.145 0.855 42 H 0.058 0.942 43 H 0.057 0.943 44 H 0.108 0.892 45 H 0.089 0.911 46 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.392 -2.562 -0.315 4.262 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.273 6.273 3 C 0.313 3.687 4 O -0.392 6.392 5 C -0.133 4.133 6 H 0.145 0.855 7 C -0.164 4.164 8 C 0.020 3.980 9 H 0.133 0.867 10 N -0.370 5.370 11 C 0.359 3.641 12 O -0.388 6.388 13 C -0.210 4.210 14 C -0.017 4.017 15 C -0.191 4.191 16 C -0.174 4.174 17 O -0.341 6.341 18 Si 0.631 3.369 19 C 0.160 3.840 20 O -0.221 6.221 21 C -0.072 4.072 22 C -0.329 4.329 23 C 0.183 3.817 24 O -0.183 6.183 25 C -0.077 4.077 26 C -0.171 4.171 27 H 0.121 0.879 28 H 0.082 0.918 29 H 0.082 0.918 30 H 0.131 0.869 31 H 0.105 0.895 32 H 0.234 0.766 33 H 0.158 0.842 34 H 0.092 0.908 35 H 0.214 0.786 36 H -0.170 1.170 37 H -0.176 1.176 38 H 0.080 0.920 39 H 0.126 0.874 40 H 0.079 0.921 41 H 0.163 0.837 42 H 0.076 0.924 43 H 0.076 0.924 44 H 0.126 0.874 45 H 0.107 0.893 46 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 2.150 -1.451 -0.467 2.636 hybrid contribution 2.059 -0.207 -0.147 2.075 sum 4.209 -1.658 -0.615 4.566 Atomic orbital electron populations 1.23312 0.76061 1.03955 1.02667 1.86522 1.23627 1.33383 1.83797 1.23594 0.91708 0.81396 0.72048 1.90686 1.66998 1.36455 1.45076 1.22687 0.87557 1.01096 1.01974 0.85456 1.23385 0.97054 0.94818 1.01150 1.21751 0.83374 0.96320 0.96576 0.86689 1.45566 1.07416 1.65503 1.18494 1.17762 0.82416 0.78276 0.85694 1.90861 1.85455 1.45153 1.17379 1.19044 0.92512 1.13729 0.95680 1.20664 0.96751 0.92245 0.92073 1.19436 0.90961 1.09658 0.99056 1.25258 1.12790 0.84378 0.94961 1.86723 1.45122 1.17802 1.84427 0.93431 0.82386 0.79413 0.81651 1.18752 0.86264 0.89213 0.89742 1.86035 1.15840 1.77406 1.42822 1.23222 0.84051 1.02369 0.97546 1.21278 0.99841 1.14463 0.97268 1.18704 0.91747 0.87362 0.83864 1.86403 1.32390 1.75540 1.23987 1.23246 0.83651 1.01935 0.98824 1.23407 0.97827 1.01386 0.94478 0.87902 0.91809 0.91770 0.86948 0.89481 0.76607 0.84236 0.90758 0.78598 1.17017 1.17613 0.92001 0.87414 0.92148 0.83719 0.92372 0.92431 0.87395 0.89252 0.88372 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.42 10.56 -39.24 -0.41 -0.84 16 3 C 0.47 0.68 7.48 36.01 0.27 0.95 16 4 O -0.50 -2.20 15.65 -18.75 -0.29 -2.50 16 5 C -0.11 0.18 4.14 -90.96 -0.38 -0.19 16 6 H 0.13 -0.51 8.14 -51.93 -0.42 -0.93 16 7 C -0.13 0.21 7.15 -25.92 -0.19 0.02 16 8 C 0.13 -0.10 4.32 -67.12 -0.29 -0.39 16 9 H 0.12 0.09 7.46 -51.93 -0.39 -0.29 16 10 N -0.72 0.60 5.21 -54.13 -0.28 0.32 16 11 C 0.57 1.46 7.76 -12.58 -0.10 1.36 16 12 O -0.51 -3.26 14.75 -16.67 -0.25 -3.50 16 13 C -0.21 -0.34 5.89 -104.84 -0.62 -0.95 16 14 C 0.00 0.00 8.14 -39.23 -0.32 -0.32 16 15 C -0.19 -0.06 5.27 -104.53 -0.55 -0.61 16 16 C -0.07 -0.02 2.32 36.00 0.08 0.07 16 17 O -0.54 -0.51 12.65 -35.23 -0.45 -0.95 16 18 Si 0.73 -0.73 30.16 -169.99 -5.13 -5.86 16 19 C 0.21 0.07 6.62 -39.06 -0.26 -0.18 16 20 O -0.31 0.17 9.36 -18.84 -0.18 -0.01 16 21 C 0.02 -0.08 9.80 101.05 0.99 0.91 16 22 C -0.31 -0.03 8.01 -39.34 -0.31 -0.35 16 23 C 0.23 0.48 6.70 -38.73 -0.26 0.22 16 24 O -0.27 -0.80 8.56 -40.60 -0.35 -1.15 16 25 C 0.02 -0.03 9.81 101.05 0.99 0.97 16 26 C -0.13 0.17 7.43 -25.92 -0.19 -0.02 16 27 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 28 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 29 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 30 H 0.11 -0.05 7.44 -51.92 -0.39 -0.44 16 31 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 32 H 0.40 -1.49 6.72 -40.82 -0.27 -1.76 16 33 H 0.14 -0.48 3.43 -52.49 -0.18 -0.66 16 34 H 0.07 0.04 7.82 -51.93 -0.41 -0.37 16 35 H 0.37 -0.35 8.59 45.56 0.39 0.04 16 36 H -0.25 0.01 7.11 56.52 0.40 0.41 16 37 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 38 H 0.06 -0.27 7.65 -51.93 -0.40 -0.67 16 39 H 0.11 -0.53 8.14 -51.93 -0.42 -0.96 16 40 H 0.06 -0.25 7.65 -51.93 -0.40 -0.65 16 41 H 0.15 -0.32 4.50 -52.49 -0.24 -0.55 16 42 H 0.06 -0.16 7.67 -51.93 -0.40 -0.56 16 43 H 0.06 -0.16 7.65 -51.93 -0.40 -0.55 16 44 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 45 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 46 H 0.10 -0.10 8.09 -51.93 -0.42 -0.52 16 LS Contribution 382.29 15.07 5.76 5.76 Total: 0.00 -10.60 382.29 -7.70 -18.30 By element: Atomic # 1 Polarization: -6.03 SS G_CDS: -6.07 Total: -12.10 kcal Atomic # 6 Polarization: 2.59 SS G_CDS: -0.06 Total: 2.53 kcal Atomic # 7 Polarization: 0.60 SS G_CDS: -0.28 Total: 0.32 kcal Atomic # 8 Polarization: -7.02 SS G_CDS: -1.92 Total: -8.94 kcal Atomic # 14 Polarization: -0.73 SS G_CDS: -5.13 Total: -5.86 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -10.60 -7.70 -18.30 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_12297780.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.775 kcal (2) G-P(sol) polarization free energy of solvation -10.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.370 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.699 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.295 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.070 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds