Wall clock time and date at job start Sat Mar 6 2021 16:02:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45193 * 1 3 3 C 1.34229 * 116.99805 * 2 1 4 4 O 1.20830 * 119.99868 * 359.97438 * 3 2 1 5 5 C 1.50700 * 120.00090 * 180.02562 * 3 2 1 6 6 H 1.08999 * 112.85246 * 48.80539 * 5 3 2 7 7 C 1.53785 * 113.61307 * 180.02562 * 5 3 2 8 8 C 1.53781 * 87.08277 * 139.98134 * 7 5 3 9 9 H 1.09002 * 113.61228 * 220.01683 * 8 7 5 10 10 N 1.46500 * 113.61711 * 89.19510 * 8 7 5 11 11 C 1.34778 * 119.99919 * 156.52821 * 10 8 7 12 12 O 1.21550 * 119.99704 * 0.02562 * 11 10 8 13 13 C 1.47857 * 119.99950 * 179.97438 * 11 10 8 14 14 C 1.39580 * 120.11324 * 359.72793 * 13 11 10 15 15 C 1.38011 * 119.98371 * 179.78638 * 14 13 11 16 16 C 1.38223 * 120.21967 * 0.48666 * 15 14 13 17 17 C 1.38946 * 120.22492 * 359.74626 * 16 15 14 18 18 N 1.40232 * 119.99458 * 180.02562 * 17 16 15 19 19 C 1.36577 * 125.66402 * 245.04623 * 18 17 16 20 20 C 1.50699 * 125.89846 * 0.02562 * 19 18 17 21 21 C 1.34848 * 108.19740 * 179.97438 * 19 18 17 22 22 C 1.40944 * 107.46728 * 359.97438 * 21 19 18 23 23 C 1.50708 * 126.26387 * 179.97438 * 22 21 19 24 24 O 1.42899 * 109.46957 * 255.02987 * 23 22 21 25 25 Si 1.86304 * 109.47072 * 15.03071 * 23 22 21 26 26 C 1.34851 * 107.46990 * 359.76002 * 22 21 19 27 27 C 1.50702 * 125.90171 * 180.25635 * 26 22 21 28 28 C 1.38545 * 120.01253 * 0.02562 * 17 16 15 29 29 C 1.53776 * 113.61532 * 277.49429 * 5 3 2 30 30 H 1.09004 * 109.46672 * 180.02562 * 1 2 3 31 31 H 1.08994 * 109.47542 * 299.99972 * 1 2 3 32 32 H 1.08998 * 109.47571 * 60.00258 * 1 2 3 33 33 H 1.08993 * 113.61827 * 25.42492 * 7 5 3 34 34 H 1.09006 * 113.68471 * 254.53718 * 7 5 3 35 35 H 0.96998 * 119.99853 * 336.53388 * 10 8 7 36 36 H 1.07996 * 120.00624 * 0.02562 * 14 13 11 37 37 H 1.08003 * 119.89152 * 180.20938 * 15 14 13 38 38 H 1.08000 * 119.88826 * 179.76328 * 16 15 14 39 39 H 1.09002 * 109.46441 * 90.00621 * 20 19 18 40 40 H 1.09002 * 109.46968 * 210.00184 * 20 19 18 41 41 H 1.08997 * 109.47320 * 330.00652 * 20 19 18 42 42 H 1.07997 * 126.26400 * 179.97438 * 21 19 18 43 43 H 1.08999 * 109.46854 * 135.02820 * 23 22 21 44 44 H 0.96695 * 114.00545 * 60.00409 * 24 23 22 45 45 H 1.48493 * 109.99890 * 179.97438 * 25 23 22 46 46 H 1.48497 * 109.99857 * 301.31734 * 25 23 22 47 47 H 1.09000 * 109.46661 * 270.15848 * 27 26 22 48 48 H 1.08996 * 109.46558 * 30.15104 * 27 26 22 49 49 H 1.09001 * 109.46862 * 150.15726 * 27 26 22 50 50 H 1.08008 * 120.10650 * 180.02562 * 28 17 16 51 51 H 1.09003 * 113.61687 * 105.46899 * 29 5 3 52 52 H 1.09009 * 113.61565 * 334.57247 * 29 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4031 2.2093 -0.0005 5 6 3.5662 1.2750 -0.0006 6 1 4.0233 0.6367 -0.7567 7 6 4.1075 2.7144 0.0001 8 6 5.1813 2.2265 0.9869 9 1 5.3967 2.9375 1.7846 10 7 6.3912 1.7197 0.3345 11 6 7.5613 1.7045 1.0031 12 8 7.6126 2.1108 2.1476 13 6 8.7823 1.1926 0.3449 14 6 8.7246 0.7192 -0.9669 15 6 9.8668 0.2461 -1.5803 16 6 11.0679 0.2296 -0.8963 17 6 11.1345 0.6941 0.4115 18 7 12.3556 0.6757 1.1006 19 6 12.6344 -0.0753 2.2068 20 6 11.6853 -1.0234 2.8933 21 6 13.9059 0.1775 2.5779 22 6 14.4330 1.1173 1.6693 23 6 15.8244 1.6959 1.6920 24 8 15.7740 3.0384 2.1791 25 14 16.9055 0.6698 2.8097 26 6 13.4658 1.4003 0.7732 27 6 13.5879 2.3545 -0.3869 28 6 9.9947 1.1756 1.0348 29 6 4.1916 1.1234 1.3961 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3634 0.5138 0.8899 32 1 -0.3634 0.5138 -0.8900 33 1 3.4172 3.4403 0.4296 34 1 4.5104 3.0312 -0.9620 35 1 6.3501 1.3953 -0.5787 36 1 7.7872 0.7269 -1.5031 37 1 9.8212 -0.1167 -2.5966 38 1 11.9576 -0.1454 -1.3802 39 1 11.7854 -2.0171 2.4566 40 1 11.9221 -1.0682 3.9564 41 1 10.6622 -0.6708 2.7635 42 1 14.4254 -0.2601 3.4176 43 1 16.2365 1.6906 0.6829 44 1 15.4170 3.1190 3.0741 45 1 18.2805 1.2296 2.8402 46 1 16.3370 0.6428 4.1813 47 1 13.2912 3.3537 -0.0682 48 1 14.6212 2.3753 -0.7329 49 1 12.9394 2.0244 -1.1985 50 1 10.0448 1.5374 2.0512 51 1 4.6621 0.1541 1.5611 52 1 3.5241 1.4146 2.2073 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_12335854.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:02:44 Heat of formation + Delta-G solvation = -41.641693 kcal Electronic energy + Delta-G solvation = -34883.993190 eV Core-core repulsion = 30203.224945 eV Total energy + Delta-G solvation = -4680.768245 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.177 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -42.87565 -42.13221 -41.23973 -39.97758 -38.92243 -37.68488 -37.38029 -34.95150 -34.01856 -33.69874 -32.40944 -30.51706 -30.14268 -29.46284 -27.26736 -27.15418 -27.02914 -25.26597 -24.69713 -23.73374 -22.63030 -22.12820 -21.04496 -20.59786 -20.37193 -19.02967 -18.62653 -17.96838 -17.57205 -17.46539 -17.43853 -17.38819 -17.18168 -16.68318 -16.20785 -16.02151 -15.78798 -15.41824 -15.32387 -15.10125 -15.05218 -14.78788 -14.66642 -14.36288 -14.28235 -14.11729 -14.00453 -13.82894 -13.66673 -13.54239 -13.44833 -13.31520 -13.23304 -13.21036 -12.99768 -12.91840 -12.66715 -12.49436 -12.03250 -11.99660 -11.90736 -11.83608 -11.55140 -11.39391 -11.18952 -10.50990 -10.41896 -10.33676 -10.24230 -9.49299 -8.75680 -4.76822 -0.54855 -0.14908 1.09166 1.14236 1.50464 1.58119 1.62937 1.66014 1.80702 1.87577 1.90695 2.15963 2.47479 3.05970 3.14454 3.31178 3.49134 3.53121 3.57239 3.61743 3.64665 3.75572 3.79949 3.88174 4.01376 4.05230 4.11341 4.14794 4.19269 4.29132 4.31469 4.36892 4.41337 4.45942 4.52296 4.54120 4.57297 4.60759 4.62205 4.65164 4.69114 4.71802 4.79132 4.80427 4.86404 4.95281 4.97619 4.99856 5.03421 5.21153 5.27922 5.33025 5.38429 5.42991 6.04764 6.20267 6.21375 6.48965 6.63984 6.67017 6.96304 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.503 6.503 5 C -0.113 4.113 6 H 0.125 0.875 7 C -0.124 4.124 8 C 0.122 3.878 9 H 0.116 0.884 10 N -0.709 5.709 11 C 0.565 3.435 12 O -0.524 6.524 13 C -0.123 4.123 14 C -0.079 4.079 15 C -0.110 4.110 16 C -0.084 4.084 17 C 0.114 3.886 18 N -0.403 5.403 19 C 0.028 3.972 20 C -0.088 4.088 21 C -0.187 4.187 22 C -0.192 4.192 23 C -0.038 4.038 24 O -0.535 6.535 25 Si 0.694 3.306 26 C 0.054 3.946 27 C -0.085 4.085 28 C -0.051 4.051 29 C -0.131 4.131 30 H 0.103 0.897 31 H 0.064 0.936 32 H 0.064 0.936 33 H 0.114 0.886 34 H 0.087 0.913 35 H 0.402 0.598 36 H 0.134 0.866 37 H 0.142 0.858 38 H 0.137 0.863 39 H 0.073 0.927 40 H 0.083 0.917 41 H 0.063 0.937 42 H 0.143 0.857 43 H 0.108 0.892 44 H 0.374 0.626 45 H -0.263 1.263 46 H -0.262 1.262 47 H 0.073 0.927 48 H 0.083 0.917 49 H 0.062 0.938 50 H 0.144 0.856 51 H 0.088 0.912 52 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.154 -5.476 -5.150 7.820 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.390 6.390 5 C -0.132 4.132 6 H 0.143 0.857 7 C -0.162 4.162 8 C 0.016 3.984 9 H 0.134 0.866 10 N -0.361 5.361 11 C 0.352 3.648 12 O -0.400 6.400 13 C -0.126 4.126 14 C -0.098 4.098 15 C -0.128 4.128 16 C -0.103 4.103 17 C 0.025 3.975 18 N -0.079 5.079 19 C -0.080 4.080 20 C -0.146 4.146 21 C -0.210 4.210 22 C -0.199 4.199 23 C -0.149 4.149 24 O -0.341 6.341 25 Si 0.596 3.404 26 C -0.055 4.055 27 C -0.143 4.143 28 C -0.071 4.071 29 C -0.170 4.170 30 H 0.122 0.878 31 H 0.083 0.917 32 H 0.083 0.917 33 H 0.133 0.867 34 H 0.105 0.895 35 H 0.238 0.762 36 H 0.151 0.849 37 H 0.160 0.840 38 H 0.155 0.845 39 H 0.092 0.908 40 H 0.101 0.899 41 H 0.082 0.918 42 H 0.161 0.839 43 H 0.126 0.874 44 H 0.222 0.778 45 H -0.188 1.188 46 H -0.187 1.187 47 H 0.092 0.908 48 H 0.102 0.898 49 H 0.081 0.919 50 H 0.161 0.839 51 H 0.107 0.893 52 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -1.886 -4.770 -4.322 6.707 hybrid contribution -1.022 0.655 -0.030 1.214 sum -2.908 -4.114 -4.352 6.657 Atomic orbital electron populations 1.23329 0.75880 1.04045 1.02755 1.86516 1.23786 1.33322 1.83784 1.23542 0.91640 0.81461 0.72168 1.90695 1.66949 1.36420 1.44948 1.22655 0.87759 1.00985 1.01804 0.85723 1.23367 0.96920 0.94883 1.01023 1.21814 0.83317 0.96498 0.96735 0.86617 1.45558 1.07714 1.65381 1.17491 1.18148 0.82867 0.77994 0.85801 1.90833 1.85594 1.46336 1.17255 1.19721 0.93593 1.04252 0.95080 1.21420 0.99185 0.95880 0.93303 1.21062 0.91458 0.99640 1.00686 1.21477 0.99251 0.96432 0.93129 1.17533 0.84990 1.02396 0.92592 1.41380 1.08384 1.34840 1.23286 1.20397 0.96727 0.99826 0.91006 1.20377 0.96978 0.96898 1.00313 1.20625 0.94266 1.03382 1.02758 1.19576 0.96651 1.04255 0.99370 1.24260 0.97007 0.87570 1.06027 1.86562 1.86293 1.25552 1.35675 0.94841 0.77623 0.88180 0.79804 1.20254 0.85773 0.99054 1.00404 1.20355 1.03414 0.96979 0.93535 1.21275 0.90190 0.94749 1.00874 1.23394 0.97782 1.01185 0.94656 0.87825 0.91711 0.91711 0.86743 0.89483 0.76211 0.84871 0.84022 0.84508 0.90784 0.89852 0.91767 0.83912 0.87403 0.77849 1.18836 1.18667 0.90813 0.89794 0.91937 0.83869 0.89347 0.88132 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.55 101.05 1.07 1.03 16 2 O -0.36 -0.25 10.57 -39.25 -0.41 -0.67 16 3 C 0.47 0.42 7.48 36.01 0.27 0.69 16 4 O -0.50 -1.92 15.65 -18.75 -0.29 -2.21 16 5 C -0.11 0.26 4.15 -90.96 -0.38 -0.12 16 6 H 0.12 -0.56 8.14 -51.93 -0.42 -0.99 16 7 C -0.12 0.31 7.14 -25.92 -0.19 0.12 16 8 C 0.12 -0.22 4.30 -67.14 -0.29 -0.51 16 9 H 0.12 -0.02 7.50 -51.93 -0.39 -0.41 16 10 N -0.71 1.66 5.22 -53.97 -0.28 1.38 16 11 C 0.56 0.43 7.77 -12.32 -0.10 0.34 16 12 O -0.52 -2.53 15.96 5.32 0.08 -2.44 16 13 C -0.12 0.06 5.87 -104.99 -0.62 -0.55 16 14 C -0.08 0.26 9.54 -39.16 -0.37 -0.12 16 15 C -0.11 0.36 10.02 -39.67 -0.40 -0.03 16 16 C -0.08 0.13 8.74 -39.32 -0.34 -0.21 16 17 C 0.11 0.05 5.02 -83.64 -0.42 -0.37 16 18 N -0.40 -0.68 2.79 -52.61 -0.15 -0.83 16 19 C 0.03 0.05 6.81 -81.68 -0.56 -0.51 16 20 C -0.09 0.02 10.08 36.01 0.36 0.38 16 21 C -0.19 -0.34 9.27 -39.76 -0.37 -0.70 16 22 C -0.19 -0.38 5.35 -104.80 -0.56 -0.94 16 23 C -0.04 -0.05 2.61 36.01 0.09 0.04 16 24 O -0.53 -1.49 12.88 -35.23 -0.45 -1.94 16 25 Si 0.69 0.37 30.86 -169.99 -5.25 -4.88 16 26 C 0.05 0.11 6.81 -81.69 -0.56 -0.45 16 27 C -0.09 -0.03 9.87 36.01 0.36 0.32 16 28 C -0.05 -0.05 8.32 -39.00 -0.32 -0.37 16 29 C -0.13 0.27 7.43 -25.94 -0.19 0.08 16 30 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 31 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 32 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 33 H 0.11 -0.14 7.44 -51.93 -0.39 -0.52 16 34 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 35 H 0.40 -2.11 6.74 -40.82 -0.27 -2.38 16 36 H 0.13 -0.84 6.40 -52.49 -0.34 -1.18 16 37 H 0.14 -0.80 8.06 -52.48 -0.42 -1.22 16 38 H 0.14 -0.32 8.06 -52.49 -0.42 -0.74 16 39 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 41 H 0.06 0.01 6.85 -51.93 -0.36 -0.35 16 42 H 0.14 0.09 6.52 -52.49 -0.34 -0.25 16 43 H 0.11 0.05 7.49 -51.93 -0.39 -0.34 16 44 H 0.37 0.18 8.70 45.56 0.40 0.57 16 45 H -0.26 -0.95 7.11 56.52 0.40 -0.54 16 46 H -0.26 -0.68 7.01 56.52 0.40 -0.28 16 47 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 48 H 0.08 -0.03 7.50 -51.93 -0.39 -0.41 16 49 H 0.06 -0.05 6.83 -51.93 -0.35 -0.40 16 50 H 0.14 0.36 7.65 -52.48 -0.40 -0.04 16 51 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 52 H 0.10 -0.17 8.09 -51.92 -0.42 -0.59 16 LS Contribution 432.27 15.07 6.51 6.51 Total: 0.00 -10.26 432.27 -11.24 -21.51 By element: Atomic # 1 Polarization: -7.05 SS G_CDS: -7.50 Total: -14.55 kcal Atomic # 6 Polarization: 1.63 SS G_CDS: -3.51 Total: -1.87 kcal Atomic # 7 Polarization: 0.98 SS G_CDS: -0.43 Total: 0.55 kcal Atomic # 8 Polarization: -6.19 SS G_CDS: -1.08 Total: -7.27 kcal Atomic # 14 Polarization: 0.37 SS G_CDS: -5.25 Total: -4.88 kcal Total LS contribution 6.51 Total: 6.51 kcal Total: -10.26 -11.24 -21.51 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_12335854.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.135 kcal (2) G-P(sol) polarization free energy of solvation -10.264 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.400 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.242 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.506 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.642 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds