Wall clock time and date at job start Sat Mar 6 2021 16:02:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34223 * 117.00016 * 2 1 4 4 O 1.20826 * 119.99938 * 359.97438 * 3 2 1 5 5 C 1.50697 * 119.99943 * 179.97438 * 3 2 1 6 6 H 1.09000 * 112.84956 * 48.80323 * 5 3 2 7 7 C 1.53786 * 113.61540 * 179.97438 * 5 3 2 8 8 C 1.53788 * 87.07966 * 139.98225 * 7 5 3 9 9 H 1.09006 * 113.61173 * 219.93321 * 8 7 5 10 10 N 1.46502 * 113.61328 * 89.11759 * 8 7 5 11 11 C 1.34774 * 119.99467 * 154.99726 * 10 8 7 12 12 O 1.21581 * 120.00388 * 0.02562 * 11 10 8 13 13 C 1.47578 * 119.99336 * 180.02562 * 11 10 8 14 14 C 1.40203 * 120.19033 * 180.02562 * 13 11 10 15 15 N 1.39665 * 120.15557 * 0.02562 * 14 13 11 16 16 C 1.36659 * 125.67759 * 270.02216 * 15 14 13 17 17 C 1.50703 * 125.90296 * 0.02562 * 16 15 14 18 18 C 1.34803 * 108.19531 * 179.97438 * 16 15 14 19 19 C 1.40999 * 107.48451 * 0.02562 * 18 16 15 20 20 C 1.50703 * 126.25498 * 180.02562 * 19 18 16 21 21 O 1.42903 * 109.46689 * 254.97392 * 20 19 18 22 22 Si 1.86301 * 109.47420 * 14.97069 * 20 19 18 23 23 C 1.34806 * 107.48531 * 359.72823 * 19 18 16 24 24 C 1.50699 * 125.90411 * 180.25436 * 23 19 18 25 25 C 1.38762 * 119.69233 * 180.29360 * 14 13 11 26 26 C 1.38069 * 120.06954 * 359.45057 * 25 14 13 27 27 C 1.38532 * 120.39403 * 0.55428 * 26 25 14 28 28 C 1.37831 * 120.31096 * 359.72055 * 27 26 25 29 29 C 1.53781 * 113.61563 * 277.49710 * 5 3 2 30 30 H 1.08995 * 109.46867 * 60.00222 * 1 2 3 31 31 H 1.09001 * 109.47150 * 179.97438 * 1 2 3 32 32 H 1.08994 * 109.46871 * 299.99824 * 1 2 3 33 33 H 1.08995 * 113.61129 * 25.43447 * 7 5 3 34 34 H 1.09003 * 113.61559 * 254.53087 * 7 5 3 35 35 H 0.96999 * 119.99802 * 335.00213 * 10 8 7 36 36 H 1.08999 * 109.47053 * 90.00036 * 17 16 15 37 37 H 1.09000 * 109.46926 * 209.99854 * 17 16 15 38 38 H 1.09000 * 109.46782 * 329.99909 * 17 16 15 39 39 H 1.08000 * 126.25955 * 180.02562 * 18 16 15 40 40 H 1.08994 * 109.47192 * 134.97071 * 20 19 18 41 41 H 0.96701 * 113.99766 * 180.02562 * 21 20 19 42 42 H 1.48505 * 109.99802 * 300.00224 * 22 20 19 43 43 H 1.48499 * 109.99735 * 61.31888 * 22 20 19 44 44 H 1.09006 * 109.46909 * 270.20798 * 24 23 19 45 45 H 1.08998 * 109.47167 * 30.20466 * 24 23 19 46 46 H 1.08994 * 109.47205 * 150.20494 * 24 23 19 47 47 H 1.07992 * 119.96579 * 179.72214 * 25 14 13 48 48 H 1.08002 * 119.80287 * 180.27604 * 26 25 14 49 49 H 1.08000 * 119.84425 * 179.74670 * 27 26 25 50 50 H 1.07995 * 120.04182 * 180.02562 * 28 27 26 51 51 H 1.09003 * 113.61310 * 105.47027 * 29 5 3 52 52 H 1.08999 * 113.61537 * 334.56687 * 29 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 1 4.0239 0.6361 -0.7549 7 6 4.1078 2.7142 -0.0001 8 6 5.1807 2.2273 0.9883 9 1 5.3965 2.9399 1.7844 10 7 6.3903 1.7179 0.3374 11 6 7.5663 1.7316 0.9956 12 8 7.6233 2.1661 2.1297 13 6 8.7849 1.2190 0.3397 14 6 10.0103 1.2307 1.0208 15 7 10.0839 1.7273 2.3242 16 6 10.3371 3.0250 2.6695 17 6 10.5837 4.1623 1.7120 18 6 10.3272 3.1122 4.0147 19 6 10.0590 1.8238 4.5208 20 6 9.9524 1.4417 5.9747 21 8 11.1302 0.7350 6.3690 22 14 9.7758 2.9805 7.0099 23 6 9.9089 0.9975 3.4662 24 6 9.6047 -0.4768 3.5349 25 6 11.1508 0.7518 0.3920 26 6 11.0751 0.2560 -0.8943 27 6 9.8660 0.2429 -1.5704 28 6 8.7243 0.7198 -0.9631 29 6 4.1906 1.1237 1.3978 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3633 0.5138 0.8900 33 1 3.4172 3.4406 0.4280 34 1 4.5113 3.0284 -0.9627 35 1 6.3448 1.3710 -0.5673 36 1 9.6356 4.6384 1.4616 37 1 11.2450 4.8927 2.1781 38 1 11.0486 3.7785 0.8040 39 1 10.4941 4.0056 4.5982 40 1 9.0804 0.8041 6.1198 41 1 11.1305 0.4570 7.2952 42 1 10.9586 3.8583 6.8209 43 1 8.5378 3.7079 6.6313 44 1 10.5378 -1.0389 3.5740 45 1 9.0172 -0.6853 4.4291 46 1 9.0390 -0.7726 2.6515 47 1 12.0978 0.7630 0.9109 48 1 11.9647 -0.1198 -1.3780 49 1 9.8177 -0.1433 -2.5778 50 1 7.7839 0.7071 -1.4941 51 1 4.6609 0.1544 1.5635 52 1 3.5226 1.4152 2.2084 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_12335856.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:02:48 Heat of formation + Delta-G solvation = -28.730819 kcal Electronic energy + Delta-G solvation = -36719.243355 eV Core-core repulsion = 32039.034967 eV Total energy + Delta-G solvation = -4680.208387 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.177 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -42.78214 -42.03526 -41.00076 -39.91972 -38.83141 -37.42075 -37.35088 -34.77834 -34.10582 -33.44046 -32.36624 -30.47096 -29.98326 -29.45350 -27.31912 -27.00462 -26.90038 -25.18222 -24.51850 -23.51776 -22.61251 -22.01522 -20.93797 -20.47918 -19.83189 -19.20663 -18.60772 -18.06726 -17.90929 -17.64339 -17.40042 -17.36514 -16.62568 -16.38697 -16.12104 -15.95058 -15.55325 -15.43352 -15.09479 -15.06658 -14.85384 -14.67270 -14.54618 -14.29378 -14.00463 -13.97973 -13.89672 -13.68486 -13.59031 -13.49493 -13.33442 -13.22290 -13.17895 -13.04339 -12.91895 -12.85656 -12.53529 -12.30092 -12.07004 -11.98220 -11.88135 -11.82431 -11.57710 -11.36909 -10.97464 -10.39149 -10.27467 -10.15994 -9.91744 -9.35984 -8.46013 -4.70997 -0.52798 -0.11634 1.10717 1.40843 1.63871 1.65072 1.68932 1.83416 1.93623 2.00264 2.17099 2.37947 2.48377 3.08694 3.17733 3.36848 3.44439 3.55361 3.62803 3.69871 3.83073 3.89450 3.91115 3.98544 4.04605 4.12263 4.20167 4.22459 4.31832 4.34200 4.41992 4.47219 4.48572 4.49779 4.53048 4.55323 4.59838 4.65179 4.71607 4.73916 4.75598 4.83217 4.84834 4.86339 4.90928 5.01241 5.06943 5.08906 5.13183 5.34116 5.35354 5.43187 5.44555 5.63898 6.27643 6.29389 6.44659 6.68451 6.74885 6.96548 7.07637 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.503 6.503 5 C -0.112 4.112 6 H 0.124 0.876 7 C -0.124 4.124 8 C 0.125 3.875 9 H 0.115 0.885 10 N -0.712 5.712 11 C 0.553 3.447 12 O -0.497 6.497 13 C -0.127 4.127 14 C 0.173 3.827 15 N -0.395 5.395 16 C 0.045 3.955 17 C -0.083 4.083 18 C -0.189 4.189 19 C -0.151 4.151 20 C -0.030 4.030 21 O -0.550 6.550 22 Si 0.685 3.315 23 C 0.075 3.925 24 C -0.078 4.078 25 C -0.112 4.112 26 C -0.082 4.082 27 C -0.113 4.113 28 C -0.081 4.081 29 C -0.131 4.131 30 H 0.064 0.936 31 H 0.103 0.897 32 H 0.064 0.936 33 H 0.113 0.887 34 H 0.085 0.915 35 H 0.399 0.601 36 H 0.069 0.931 37 H 0.079 0.921 38 H 0.060 0.940 39 H 0.131 0.869 40 H 0.061 0.939 41 H 0.374 0.626 42 H -0.256 1.256 43 H -0.260 1.260 44 H 0.072 0.928 45 H 0.079 0.921 46 H 0.055 0.945 47 H 0.138 0.862 48 H 0.139 0.861 49 H 0.139 0.861 50 H 0.134 0.866 51 H 0.087 0.913 52 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.408 -4.691 -3.702 5.989 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.390 6.390 5 C -0.131 4.131 6 H 0.142 0.858 7 C -0.162 4.162 8 C 0.019 3.981 9 H 0.133 0.867 10 N -0.365 5.365 11 C 0.340 3.660 12 O -0.371 6.371 13 C -0.132 4.132 14 C 0.083 3.917 15 N -0.071 5.071 16 C -0.063 4.063 17 C -0.140 4.140 18 C -0.213 4.213 19 C -0.157 4.157 20 C -0.141 4.141 21 O -0.355 6.355 22 Si 0.587 3.413 23 C -0.034 4.034 24 C -0.136 4.136 25 C -0.131 4.131 26 C -0.100 4.100 27 C -0.131 4.131 28 C -0.100 4.100 29 C -0.169 4.169 30 H 0.083 0.917 31 H 0.122 0.878 32 H 0.083 0.917 33 H 0.132 0.868 34 H 0.104 0.896 35 H 0.235 0.765 36 H 0.087 0.913 37 H 0.098 0.902 38 H 0.079 0.921 39 H 0.149 0.851 40 H 0.079 0.921 41 H 0.221 0.779 42 H -0.181 1.181 43 H -0.185 1.185 44 H 0.091 0.909 45 H 0.098 0.902 46 H 0.074 0.926 47 H 0.156 0.844 48 H 0.157 0.843 49 H 0.156 0.844 50 H 0.152 0.848 51 H 0.105 0.895 52 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -0.522 -3.178 -3.787 4.971 hybrid contribution -0.514 -0.423 -1.275 1.438 sum -1.036 -3.601 -5.061 6.298 Atomic orbital electron populations 1.23328 0.75898 1.04029 1.02746 1.86517 1.23770 1.33323 1.83789 1.23542 0.91637 0.81456 0.72151 1.90692 1.66950 1.36425 1.44964 1.22647 0.87727 1.00984 1.01788 0.85820 1.23371 0.97000 0.94845 1.01000 1.21783 0.83298 0.96373 0.96611 0.86722 1.45568 1.07358 1.65094 1.18483 1.18097 0.82808 0.79071 0.86073 1.90943 1.85342 1.43891 1.16906 1.20175 0.93389 1.04118 0.95483 1.17508 0.92415 0.97483 0.84343 1.40908 1.56322 1.07630 1.02229 1.20054 1.07785 0.84055 0.94381 1.20282 1.02135 0.94579 0.97008 1.20329 1.11044 0.97169 0.92726 1.18345 1.12218 0.93339 0.91846 1.23926 0.89493 1.04988 0.95690 1.86532 1.39976 1.77131 1.31865 0.96111 0.80181 0.77688 0.87302 1.19936 1.06069 0.93877 0.83568 1.20246 1.01806 0.88990 1.02539 1.21409 0.97946 0.98179 0.95553 1.21361 0.98648 0.96480 0.93560 1.21292 0.92156 0.98911 1.00715 1.21273 0.99411 0.96503 0.92833 1.23397 0.97806 1.01172 0.94570 0.91733 0.87833 0.91706 0.86840 0.89595 0.76508 0.91269 0.90191 0.92105 0.85148 0.92129 0.77917 1.18097 1.18459 0.90908 0.90219 0.92614 0.84395 0.84270 0.84352 0.84826 0.89451 0.88231 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.41 10.57 -39.24 -0.41 -0.83 16 3 C 0.47 0.68 7.48 36.00 0.27 0.95 16 4 O -0.50 -2.19 15.65 -18.75 -0.29 -2.48 16 5 C -0.11 0.18 4.14 -90.96 -0.38 -0.19 16 6 H 0.12 -0.46 8.14 -51.93 -0.42 -0.89 16 7 C -0.12 0.20 7.15 -25.91 -0.19 0.02 16 8 C 0.12 -0.10 4.33 -67.09 -0.29 -0.39 16 9 H 0.11 0.14 7.46 -51.93 -0.39 -0.25 16 10 N -0.71 0.91 5.21 -54.02 -0.28 0.63 16 11 C 0.55 1.11 7.77 -12.45 -0.10 1.02 16 12 O -0.50 -2.93 13.28 5.29 0.07 -2.86 16 13 C -0.13 -0.10 5.89 -104.82 -0.62 -0.72 16 14 C 0.17 0.38 4.52 -83.36 -0.38 0.00 16 15 N -0.40 -1.82 1.45 -52.35 -0.08 -1.89 16 16 C 0.05 0.24 6.00 -81.66 -0.49 -0.25 16 17 C -0.08 -0.22 10.09 36.01 0.36 0.14 16 18 C -0.19 -1.26 9.27 -39.75 -0.37 -1.63 16 19 C -0.15 -0.94 5.39 -104.79 -0.56 -1.51 16 20 C -0.03 -0.10 2.60 36.01 0.09 -0.01 16 21 O -0.55 -1.60 12.86 -35.23 -0.45 -2.05 16 22 Si 0.69 1.60 30.84 -169.99 -5.24 -3.64 16 23 C 0.07 0.40 5.99 -81.66 -0.49 -0.09 16 24 C -0.08 -0.23 9.87 36.01 0.36 0.12 16 25 C -0.11 -0.02 9.96 -39.45 -0.39 -0.41 16 26 C -0.08 0.18 10.03 -39.53 -0.40 -0.22 16 27 C -0.11 0.34 10.02 -39.62 -0.40 -0.05 16 28 C -0.08 0.19 9.54 -39.20 -0.37 -0.18 16 29 C -0.13 0.16 7.43 -25.90 -0.19 -0.03 16 30 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 31 H 0.10 -0.31 8.14 -51.93 -0.42 -0.74 16 32 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 33 H 0.11 -0.04 7.43 -51.93 -0.39 -0.42 16 34 H 0.09 -0.24 8.14 -51.93 -0.42 -0.66 16 35 H 0.40 -1.63 6.73 -40.82 -0.27 -1.91 16 36 H 0.07 0.20 8.14 -51.93 -0.42 -0.23 16 37 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 38 H 0.06 0.11 7.83 -51.93 -0.41 -0.30 16 39 H 0.13 0.82 6.55 -52.49 -0.34 0.48 16 40 H 0.06 0.13 7.49 -51.93 -0.39 -0.26 16 41 H 0.37 -0.88 8.74 45.56 0.40 -0.48 16 42 H -0.26 -1.37 7.06 56.52 0.40 -0.98 16 43 H -0.26 -1.45 7.11 56.52 0.40 -1.05 16 44 H 0.07 0.17 8.14 -51.93 -0.42 -0.25 16 45 H 0.08 0.18 7.50 -51.93 -0.39 -0.21 16 46 H 0.05 0.14 7.83 -51.93 -0.41 -0.27 16 47 H 0.14 0.00 8.06 -52.49 -0.42 -0.42 16 48 H 0.14 -0.60 8.06 -52.49 -0.42 -1.03 16 49 H 0.14 -0.74 8.06 -52.49 -0.42 -1.17 16 50 H 0.13 -0.71 6.40 -52.49 -0.34 -1.05 16 51 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 52 H 0.10 -0.08 8.09 -51.93 -0.42 -0.50 16 LS Contribution 431.52 15.07 6.50 6.50 Total: 0.00 -12.05 431.52 -11.26 -23.31 By element: Atomic # 1 Polarization: -6.69 SS G_CDS: -7.62 Total: -14.31 kcal Atomic # 6 Polarization: 1.08 SS G_CDS: -3.46 Total: -2.38 kcal Atomic # 7 Polarization: -0.91 SS G_CDS: -0.36 Total: -1.27 kcal Atomic # 8 Polarization: -7.13 SS G_CDS: -1.09 Total: -8.22 kcal Atomic # 14 Polarization: 1.60 SS G_CDS: -5.24 Total: -3.64 kcal Total LS contribution 6.50 Total: 6.50 kcal Total: -12.05 -11.26 -23.31 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_12335856.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.420 kcal (2) G-P(sol) polarization free energy of solvation -12.050 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.470 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.261 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.311 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.731 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds