Wall clock time and date at job start Sat Mar 6 2021 16:03:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34233 * 116.99675 * 2 1 4 4 O 1.20821 * 120.00056 * 359.97438 * 3 2 1 5 5 C 1.50699 * 119.99815 * 179.97438 * 3 2 1 6 6 H 1.09002 * 112.84923 * 311.19469 * 5 3 2 7 7 C 1.53962 * 113.66451 * 82.43806 * 5 3 2 8 8 C 1.53786 * 87.01719 * 139.93336 * 7 5 3 9 9 H 1.09002 * 113.61357 * 220.04719 * 8 7 5 10 10 N 1.46497 * 113.61643 * 89.22773 * 8 7 5 11 11 C 1.34780 * 119.99653 * 105.85894 * 10 8 7 12 12 O 1.21694 * 120.00652 * 0.02562 * 11 10 8 13 13 C 1.46434 * 119.99443 * 180.02562 * 11 10 8 14 14 C 1.34813 * 119.99573 * 180.02562 * 13 11 10 15 15 C 1.47209 * 119.99679 * 180.02562 * 14 13 11 16 16 C 1.39831 * 120.17058 * 359.71903 * 15 14 13 17 17 C 1.37894 * 119.82319 * 179.77042 * 16 15 14 18 18 C 1.38406 * 120.17279 * 0.52922 * 17 16 15 19 19 C 1.50700 * 119.83001 * 179.71901 * 18 17 16 20 20 O 1.42893 * 109.47387 * 244.98072 * 19 18 17 21 21 Si 1.86305 * 109.47057 * 4.98209 * 19 18 17 22 22 C 1.38399 * 120.34338 * 359.70057 * 18 17 16 23 23 C 1.37893 * 120.17225 * 0.04331 * 22 18 17 24 24 C 1.53781 * 87.17350 * 334.63802 * 8 7 5 25 25 H 1.09005 * 109.46981 * 299.99806 * 1 2 3 26 26 H 1.08997 * 109.47334 * 60.00477 * 1 2 3 27 27 H 1.09004 * 109.46764 * 180.02562 * 1 2 3 28 28 H 1.08993 * 113.61598 * 25.41318 * 7 5 3 29 29 H 1.09000 * 113.66569 * 254.45673 * 7 5 3 30 30 H 0.96995 * 120.00146 * 285.86755 * 10 8 7 31 31 H 1.07993 * 120.00377 * 0.02562 * 13 11 10 32 32 H 1.07996 * 120.00158 * 359.97438 * 14 13 11 33 33 H 1.07996 * 120.08813 * 0.02562 * 16 15 14 34 34 H 1.08002 * 119.91282 * 180.25175 * 17 16 15 35 35 H 1.09005 * 109.46962 * 124.97911 * 19 18 17 36 36 H 0.96708 * 114.00071 * 59.99610 * 20 19 18 37 37 H 1.48494 * 110.00208 * 179.97438 * 21 19 18 38 38 H 1.48507 * 109.99837 * 301.31896 * 21 19 18 39 39 H 1.07997 * 119.91873 * 180.02562 * 22 18 17 40 40 H 1.08000 * 120.08812 * 180.02562 * 23 22 18 41 41 H 1.09001 * 113.61695 * 139.93969 * 24 8 7 42 42 H 1.08997 * 113.61223 * 270.84552 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2750 0.0006 6 1 4.0233 0.6366 0.7567 7 6 4.1937 1.1217 -1.3970 8 6 5.1814 2.2267 -0.9866 9 1 5.3967 2.9380 -1.7840 10 7 6.3912 1.7198 -0.3344 11 6 7.5613 1.7047 -1.0031 12 8 7.6130 2.1126 -2.1485 13 6 8.7705 1.1975 -0.3513 14 6 9.9410 1.1829 -1.0200 15 6 11.1565 0.6725 -0.3650 16 6 11.1023 0.2074 0.9526 17 6 12.2442 -0.2735 1.5577 18 6 13.4441 -0.2866 0.8680 19 6 14.6887 -0.8081 1.5389 20 8 15.6303 0.2561 1.6895 21 14 14.2505 -1.4914 3.2158 22 6 13.5069 0.1764 -0.4347 23 6 12.3726 0.6556 -1.0553 24 6 4.1077 2.7143 0.0004 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5137 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 3.5270 1.4116 -2.2091 29 1 4.6657 0.1530 -1.5609 30 1 6.3502 1.3950 0.5786 31 1 8.7247 0.8352 0.6650 32 1 9.9868 1.5448 -2.0365 33 1 10.1677 0.2211 1.4936 34 1 12.2031 -0.6369 2.5739 35 1 15.1271 -1.5974 0.9282 36 1 15.3068 0.9951 2.2229 37 1 15.4692 -2.0094 3.8876 38 1 13.6226 -0.4331 4.0472 39 1 14.4467 0.1627 -0.9666 40 1 12.4230 1.0162 -2.0721 41 1 4.5103 3.0295 0.9631 42 1 3.4174 3.4404 -0.4290 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_12360594.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:03:02 Heat of formation + Delta-G solvation = -77.991935 kcal Electronic energy + Delta-G solvation = -24752.704049 eV Core-core repulsion = 20858.850588 eV Total energy + Delta-G solvation = -3893.853461 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.135 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.01180 -40.96592 -40.59825 -39.17722 -37.93230 -37.33268 -35.12456 -34.33579 -32.30684 -31.35457 -29.46920 -27.62457 -26.95799 -26.68366 -24.40501 -23.97675 -22.54554 -22.11841 -20.66927 -20.32506 -19.13173 -18.73634 -18.18143 -17.75624 -17.38703 -17.33739 -16.85740 -16.62053 -16.27135 -16.01607 -15.90965 -15.44106 -15.22138 -15.03536 -14.73272 -14.63299 -14.26052 -14.13769 -13.93181 -13.73908 -13.49883 -13.35745 -13.17431 -13.07004 -12.86225 -12.33766 -12.14300 -11.95456 -11.83305 -11.79467 -11.66219 -11.40055 -11.32776 -10.99923 -10.67266 -10.18894 -10.08515 -9.34504 -5.03615 -0.62338 0.28743 0.84115 1.14350 1.20160 1.51330 1.69339 1.89520 2.02493 2.21218 2.72019 3.14315 3.22866 3.28446 3.44711 3.55188 3.59790 3.67796 3.71037 3.79177 3.94427 4.05892 4.10442 4.14860 4.22652 4.22970 4.33960 4.38909 4.47521 4.52902 4.58229 4.63171 4.70185 4.74424 4.76666 4.85911 4.90108 4.99620 5.04914 5.28205 5.37460 5.38075 5.45063 5.51845 5.79009 6.31742 6.40858 6.71890 7.17321 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.504 6.504 5 C -0.113 4.113 6 H 0.125 0.875 7 C -0.132 4.132 8 C 0.122 3.878 9 H 0.114 0.886 10 N -0.711 5.711 11 C 0.552 3.448 12 O -0.539 6.539 13 C -0.216 4.216 14 C -0.012 4.012 15 C -0.073 4.073 16 C -0.095 4.095 17 C -0.121 4.121 18 C -0.105 4.105 19 C -0.078 4.078 20 O -0.528 6.528 21 Si 0.687 3.313 22 C -0.094 4.094 23 C -0.092 4.092 24 C -0.124 4.124 25 H 0.064 0.936 26 H 0.064 0.936 27 H 0.103 0.897 28 H 0.098 0.902 29 H 0.088 0.912 30 H 0.403 0.597 31 H 0.131 0.869 32 H 0.138 0.862 33 H 0.132 0.868 34 H 0.131 0.869 35 H 0.120 0.880 36 H 0.376 0.624 37 H -0.257 1.257 38 H -0.260 1.260 39 H 0.130 0.870 40 H 0.132 0.868 41 H 0.086 0.914 42 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.960 -3.890 3.011 5.012 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.391 6.391 5 C -0.132 4.132 6 H 0.143 0.857 7 C -0.170 4.170 8 C 0.017 3.983 9 H 0.132 0.868 10 N -0.362 5.362 11 C 0.342 3.658 12 O -0.417 6.417 13 C -0.237 4.237 14 C -0.032 4.032 15 C -0.074 4.074 16 C -0.113 4.113 17 C -0.138 4.138 18 C -0.105 4.105 19 C -0.188 4.188 20 O -0.335 6.335 21 Si 0.588 3.412 22 C -0.112 4.112 23 C -0.110 4.110 24 C -0.162 4.162 25 H 0.083 0.917 26 H 0.083 0.917 27 H 0.122 0.878 28 H 0.117 0.883 29 H 0.106 0.894 30 H 0.238 0.762 31 H 0.149 0.851 32 H 0.156 0.844 33 H 0.149 0.851 34 H 0.148 0.852 35 H 0.138 0.862 36 H 0.224 0.776 37 H -0.182 1.182 38 H -0.185 1.185 39 H 0.148 0.852 40 H 0.150 0.850 41 H 0.105 0.895 42 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges -0.680 -3.636 2.690 4.574 hybrid contribution -0.117 0.953 0.549 1.106 sum -0.797 -2.684 3.239 4.281 Atomic orbital electron populations 1.23326 0.75949 1.04013 1.02724 1.86521 1.23735 1.33364 1.83802 1.23574 0.91685 0.81425 0.72108 1.90687 1.66974 1.36434 1.45007 1.22690 0.87607 1.01027 1.01861 0.85698 1.23429 0.97833 1.01249 0.94525 1.21780 0.83586 0.96357 0.96620 0.86830 1.45558 1.07799 1.65400 1.17465 1.18345 0.83513 0.78024 0.85954 1.90849 1.86005 1.47150 1.17675 1.22857 0.92795 1.06568 1.01449 1.22427 0.90487 0.90939 0.99356 1.19069 0.93349 1.00712 0.94225 1.21352 0.98539 0.97402 0.94006 1.21006 0.92498 1.00377 0.99936 1.20467 0.95117 0.99714 0.95243 1.25082 0.89794 0.93374 1.10531 1.86619 1.41438 1.30971 1.74429 0.94961 0.84067 0.87012 0.75154 1.21008 0.98631 0.97465 0.94130 1.21475 0.91623 0.97826 1.00039 1.23358 0.97017 0.94813 1.01043 0.91747 0.91727 0.87849 0.88318 0.89376 0.76211 0.85088 0.84404 0.85056 0.85208 0.86226 0.77592 1.18158 1.18491 0.85164 0.85014 0.89544 0.86920 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.40 10.57 -39.27 -0.41 -0.82 16 3 C 0.47 0.64 7.49 36.01 0.27 0.91 16 4 O -0.50 -2.15 15.65 -18.75 -0.29 -2.44 16 5 C -0.11 0.20 4.15 -90.86 -0.38 -0.18 16 6 H 0.13 -0.48 8.14 -51.93 -0.42 -0.90 16 7 C -0.13 0.20 7.44 -25.82 -0.19 0.01 16 8 C 0.12 -0.15 4.30 -67.12 -0.29 -0.44 16 9 H 0.11 0.06 7.50 -51.93 -0.39 -0.33 16 10 N -0.71 1.35 5.26 -54.40 -0.29 1.06 16 11 C 0.55 0.48 7.74 -12.96 -0.10 0.38 16 12 O -0.54 -2.71 15.85 5.19 0.08 -2.63 16 13 C -0.22 0.27 9.41 -37.50 -0.35 -0.08 16 14 C -0.01 0.01 9.46 -37.15 -0.35 -0.35 16 15 C -0.07 0.05 5.87 -105.06 -0.62 -0.57 16 16 C -0.10 0.16 9.41 -39.11 -0.37 -0.21 16 17 C -0.12 0.19 8.65 -39.65 -0.34 -0.15 16 18 C -0.11 0.09 5.36 -104.50 -0.56 -0.47 16 19 C -0.08 0.08 2.80 36.01 0.10 0.18 16 20 O -0.53 -0.32 12.83 -35.23 -0.45 -0.77 16 21 Si 0.69 -1.22 29.87 -169.99 -5.08 -6.29 16 22 C -0.09 0.04 9.66 -39.65 -0.38 -0.34 16 23 C -0.09 0.06 9.80 -39.11 -0.38 -0.33 16 24 C -0.12 0.23 7.15 -25.92 -0.19 0.05 16 25 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 26 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 27 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 28 H 0.10 -0.11 8.10 -51.93 -0.42 -0.54 16 29 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 30 H 0.40 -1.94 8.69 -40.82 -0.35 -2.29 16 31 H 0.13 -0.54 6.07 -52.49 -0.32 -0.86 16 32 H 0.14 0.03 7.52 -52.49 -0.39 -0.36 16 33 H 0.13 -0.51 6.17 -52.49 -0.32 -0.84 16 34 H 0.13 -0.41 4.81 -52.49 -0.25 -0.66 16 35 H 0.12 -0.20 7.96 -51.93 -0.41 -0.62 16 36 H 0.38 -0.82 8.70 45.56 0.40 -0.42 16 37 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 38 H -0.26 0.00 7.00 56.52 0.40 0.40 16 39 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 40 H 0.13 -0.26 8.06 -52.49 -0.42 -0.68 16 41 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 42 H 0.11 -0.07 7.43 -51.93 -0.39 -0.46 16 LS Contribution 361.27 15.07 5.44 5.44 Total: 0.00 -9.57 361.27 -9.50 -19.08 By element: Atomic # 1 Polarization: -6.63 SS G_CDS: -5.44 Total: -12.07 kcal Atomic # 6 Polarization: 2.52 SS G_CDS: -3.06 Total: -0.55 kcal Atomic # 7 Polarization: 1.35 SS G_CDS: -0.29 Total: 1.06 kcal Atomic # 8 Polarization: -5.59 SS G_CDS: -1.08 Total: -6.66 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.08 Total: -6.29 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -9.57 -9.50 -19.08 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_12360594.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.917 kcal (2) G-P(sol) polarization free energy of solvation -9.572 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.489 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.503 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.075 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.992 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds