Wall clock time and date at job start Sat Mar 6 2021 16:03:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34228 * 116.99650 * 2 1 4 4 O 1.20825 * 120.00285 * 359.97438 * 3 2 1 5 5 C 1.50706 * 119.99688 * 179.97438 * 3 2 1 6 6 H 1.09003 * 112.90767 * 48.75175 * 5 3 2 7 7 C 1.53784 * 113.61215 * 179.97438 * 5 3 2 8 8 C 1.53778 * 87.07766 * 139.98108 * 7 5 3 9 9 H 1.09002 * 113.61441 * 219.92883 * 8 7 5 10 10 N 1.46501 * 113.61348 * 89.11727 * 8 7 5 11 11 C 1.34780 * 120.00108 * 156.52549 * 10 8 7 12 12 O 1.21568 * 120.00041 * 0.02562 * 11 10 8 13 13 C 1.47698 * 119.99868 * 179.97438 * 11 10 8 14 14 C 1.39805 * 120.15099 * 180.02562 * 13 11 10 15 15 F 1.35105 * 120.08661 * 359.74830 * 14 13 11 16 16 C 1.38317 * 119.82898 * 180.02562 * 14 13 11 17 17 C 1.38178 * 120.14691 * 359.97438 * 16 14 13 18 18 C 1.50700 * 119.84420 * 179.97438 * 17 16 14 19 19 O 1.42901 * 109.47263 * 255.02172 * 18 17 16 20 20 Si 1.86305 * 109.47149 * 15.02514 * 18 17 16 21 21 C 1.38656 * 120.31574 * 0.02562 * 17 16 14 22 22 F 1.35102 * 119.91925 * 180.02562 * 21 17 16 23 23 C 1.38068 * 120.16447 * 359.97438 * 21 17 16 24 24 C 1.53776 * 87.17423 * 334.52399 * 8 7 5 25 25 H 1.08998 * 109.46989 * 300.00454 * 1 2 3 26 26 H 1.09000 * 109.47210 * 59.99912 * 1 2 3 27 27 H 1.08997 * 109.46914 * 180.02562 * 1 2 3 28 28 H 1.08995 * 113.61625 * 25.43484 * 7 5 3 29 29 H 1.08996 * 113.61343 * 254.52635 * 7 5 3 30 30 H 0.97000 * 120.00145 * 336.52605 * 10 8 7 31 31 H 1.07999 * 119.92345 * 179.97438 * 16 14 13 32 32 H 1.09003 * 109.46955 * 135.02376 * 18 17 16 33 33 H 0.96697 * 114.00057 * 179.97438 * 19 18 17 34 34 H 1.48496 * 109.99909 * 178.68413 * 20 18 17 35 35 H 1.48500 * 109.99524 * 300.00249 * 20 18 17 36 36 H 1.08004 * 120.07311 * 180.02562 * 23 21 17 37 37 H 1.09007 * 113.61421 * 140.01960 * 24 8 7 38 38 H 1.08998 * 113.61378 * 270.92263 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0250 0.6359 -0.7540 7 6 4.1077 2.7143 -0.0001 8 6 5.1806 2.2275 0.9882 9 1 5.3964 2.9401 1.7843 10 7 6.3902 1.7182 0.3374 11 6 7.5601 1.7033 1.0064 12 8 7.6115 2.1121 2.1502 13 6 8.7795 1.1893 0.3504 14 6 9.9946 1.1719 1.0416 15 9 10.0584 1.6302 2.3109 16 6 11.1325 0.6896 0.4206 17 6 11.0699 0.2254 -0.8794 18 6 12.3140 -0.2981 -1.5495 19 8 12.7903 0.6666 -2.4900 20 14 13.6258 -0.6132 -0.2647 21 6 9.8680 0.2398 -1.5705 22 9 9.8157 -0.2165 -2.8411 23 6 8.7241 0.7184 -0.9632 24 6 4.1917 1.1243 1.4003 25 1 -0.3633 0.5139 0.8899 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 3.4171 3.4408 0.4280 29 1 4.5112 3.0285 -0.9627 30 1 6.3492 1.3917 -0.5751 31 1 12.0721 0.6758 0.9530 32 1 12.0831 -1.2284 -2.0687 33 1 13.5911 0.3960 -2.9597 34 1 14.8470 -1.1596 -0.9091 35 1 13.9495 0.6475 0.4502 36 1 7.7886 0.7287 -1.5028 37 1 4.6630 0.1557 1.5676 38 1 3.5240 1.4169 2.2107 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_12360598.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:03:04 Heat of formation + Delta-G solvation = -171.361382 kcal Electronic energy + Delta-G solvation = -27485.605064 eV Core-core repulsion = 22932.558608 eV Total energy + Delta-G solvation = -4553.046456 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.100 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -50.10972 -49.97619 -42.10476 -41.23229 -40.15630 -39.07550 -37.82921 -37.34549 -34.78640 -33.21679 -31.42174 -29.52654 -28.11751 -27.00150 -26.83836 -24.47043 -23.96959 -22.54206 -22.02075 -20.56412 -19.74464 -18.85456 -18.78566 -18.58343 -18.39199 -17.91130 -17.45981 -17.25781 -17.09742 -16.94593 -16.48168 -16.27346 -15.94016 -15.72800 -15.63008 -15.57003 -15.14672 -14.94049 -14.47616 -14.27458 -14.02936 -13.81467 -13.75988 -13.62380 -13.53745 -13.21021 -13.06650 -12.89192 -12.44681 -12.02534 -11.98999 -11.86926 -11.80492 -11.35918 -11.15272 -10.76143 -10.63379 -10.29918 -9.82236 -5.15283 -0.83913 -0.34291 0.99436 1.12446 1.35954 1.41965 1.66514 1.73325 1.75852 2.21092 2.69761 2.79330 2.97696 3.09339 3.16913 3.25055 3.30698 3.49501 3.55763 3.63349 3.67417 3.91628 3.98073 4.14170 4.19276 4.22037 4.28855 4.34234 4.45497 4.50351 4.56066 4.60203 4.63414 4.65771 4.69699 4.73127 4.83794 5.30126 5.35288 5.36286 6.17995 6.19923 6.70384 6.94749 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.503 6.503 5 C -0.114 4.114 6 H 0.125 0.875 7 C -0.124 4.124 8 C 0.122 3.878 9 H 0.117 0.883 10 N -0.709 5.709 11 C 0.565 3.435 12 O -0.508 6.508 13 C -0.142 4.142 14 C 0.162 3.838 15 F -0.104 7.104 16 C -0.133 4.133 17 C -0.050 4.050 18 C -0.082 4.082 19 O -0.530 6.530 20 Si 0.692 3.308 21 C 0.111 3.889 22 F -0.122 7.122 23 C -0.093 4.093 24 C -0.131 4.131 25 H 0.064 0.936 26 H 0.064 0.936 27 H 0.103 0.897 28 H 0.115 0.885 29 H 0.087 0.913 30 H 0.402 0.598 31 H 0.159 0.841 32 H 0.087 0.913 33 H 0.386 0.614 34 H -0.253 1.253 35 H -0.249 1.249 36 H 0.152 0.848 37 H 0.089 0.911 38 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.575 -5.285 -2.403 5.834 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.390 6.390 5 C -0.133 4.133 6 H 0.143 0.857 7 C -0.162 4.162 8 C 0.017 3.983 9 H 0.135 0.865 10 N -0.361 5.361 11 C 0.351 3.649 12 O -0.383 6.383 13 C -0.146 4.146 14 C 0.141 3.859 15 F -0.081 7.081 16 C -0.152 4.152 17 C -0.052 4.052 18 C -0.191 4.191 19 O -0.339 6.339 20 Si 0.592 3.408 21 C 0.091 3.909 22 F -0.100 7.100 23 C -0.113 4.113 24 C -0.170 4.170 25 H 0.083 0.917 26 H 0.083 0.917 27 H 0.122 0.878 28 H 0.133 0.867 29 H 0.105 0.895 30 H 0.238 0.762 31 H 0.176 0.824 32 H 0.105 0.895 33 H 0.235 0.765 34 H -0.177 1.177 35 H -0.173 1.173 36 H 0.170 0.830 37 H 0.108 0.892 38 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 0.658 -4.164 -1.067 4.348 hybrid contribution 0.038 0.109 -1.809 1.812 sum 0.695 -4.055 -2.876 5.020 Atomic orbital electron populations 1.23327 0.75910 1.04024 1.02739 1.86519 1.23758 1.33324 1.83784 1.23539 0.91636 0.81451 0.72148 1.90692 1.66956 1.36425 1.44973 1.22718 0.87757 1.00991 1.01833 0.85700 1.23367 0.96905 0.94904 1.01019 1.21832 0.83177 0.96530 0.96738 0.86486 1.45539 1.07699 1.65318 1.17553 1.17802 0.82590 0.78589 0.85885 1.90903 1.85280 1.45431 1.16686 1.19810 0.93830 1.06105 0.94879 1.17439 0.92449 0.95671 0.80362 1.91660 1.96701 1.85187 1.34598 1.21008 0.98902 1.00440 0.94827 1.19311 0.93613 0.98881 0.93360 1.24786 1.00056 0.94268 1.00010 1.86585 1.47635 1.43954 1.55679 0.94841 0.78306 0.85476 0.82162 1.17198 0.93456 0.99863 0.80404 1.91570 1.96962 1.86125 1.35367 1.21133 0.98583 0.97927 0.93636 1.23449 0.97738 1.01191 0.94583 0.91718 0.91732 0.87843 0.86697 0.89459 0.76232 0.82422 0.89545 0.76487 1.17737 1.17325 0.83047 0.89249 0.88093 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.32 10.57 -39.25 -0.41 -0.74 16 3 C 0.47 0.52 7.49 36.01 0.27 0.79 16 4 O -0.50 -2.03 15.65 -18.75 -0.29 -2.32 16 5 C -0.11 0.24 4.15 -90.82 -0.38 -0.14 16 6 H 0.13 -0.53 8.14 -51.93 -0.42 -0.95 16 7 C -0.12 0.28 7.15 -25.92 -0.19 0.09 16 8 C 0.12 -0.20 4.29 -67.12 -0.29 -0.49 16 9 H 0.12 -0.01 7.50 -51.93 -0.39 -0.40 16 10 N -0.71 1.41 5.21 -54.01 -0.28 1.13 16 11 C 0.56 0.70 7.77 -12.39 -0.10 0.60 16 12 O -0.51 -2.66 14.96 5.31 0.08 -2.58 16 13 C -0.14 -0.02 5.88 -104.92 -0.62 -0.63 16 14 C 0.16 0.19 7.28 -38.97 -0.28 -0.09 16 15 F -0.10 -0.37 15.55 2.25 0.04 -0.33 16 16 C -0.13 0.05 8.62 -39.57 -0.34 -0.29 16 17 C -0.05 0.02 5.30 -104.49 -0.55 -0.53 16 18 C -0.08 0.13 2.43 36.01 0.09 0.22 16 19 O -0.53 0.09 12.86 -35.23 -0.45 -0.36 16 20 Si 0.69 -1.77 30.19 -169.99 -5.13 -6.91 16 21 C 0.11 -0.05 7.23 -39.49 -0.29 -0.33 16 22 F -0.12 -0.07 16.73 2.25 0.04 -0.03 16 23 C -0.09 0.18 9.51 -39.12 -0.37 -0.20 16 24 C -0.13 0.26 7.45 -25.78 -0.19 0.07 16 25 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 26 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 27 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 28 H 0.11 -0.12 7.43 -51.93 -0.39 -0.50 16 29 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 30 H 0.40 -1.94 6.74 -40.82 -0.27 -2.22 16 31 H 0.16 -0.27 4.87 -52.49 -0.26 -0.53 16 32 H 0.09 -0.26 7.89 -51.93 -0.41 -0.67 16 33 H 0.39 -1.61 8.74 45.56 0.40 -1.22 16 34 H -0.25 0.15 7.11 56.52 0.40 0.55 16 35 H -0.25 -0.04 6.74 56.52 0.38 0.34 16 36 H 0.15 -0.76 6.41 -52.48 -0.34 -1.10 16 37 H 0.09 -0.19 8.14 -51.93 -0.42 -0.61 16 38 H 0.10 -0.17 8.10 -51.93 -0.42 -0.59 16 LS Contribution 337.18 15.07 5.08 5.08 Total: 0.00 -9.92 337.18 -7.34 -17.26 By element: Atomic # 1 Polarization: -6.48 SS G_CDS: -3.83 Total: -10.30 kcal Atomic # 6 Polarization: 2.27 SS G_CDS: -2.17 Total: 0.10 kcal Atomic # 7 Polarization: 1.41 SS G_CDS: -0.28 Total: 1.13 kcal Atomic # 8 Polarization: -4.92 SS G_CDS: -1.08 Total: -6.00 kcal Atomic # 9 Polarization: -0.43 SS G_CDS: 0.07 Total: -0.36 kcal Atomic # 14 Polarization: -1.77 SS G_CDS: -5.13 Total: -6.91 kcal Total LS contribution 5.08 Total: 5.08 kcal Total: -9.92 -7.34 -17.26 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_12360598.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -154.102 kcal (2) G-P(sol) polarization free energy of solvation -9.922 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -164.024 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.337 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.260 kcal (6) G-S(sol) free energy of system = (1) + (5) -171.361 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds