Wall clock time and date at job start Sat Mar 6 2021 16:03:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34229 * 117.00147 * 2 1 4 4 O 1.20825 * 119.99794 * 0.02562 * 3 2 1 5 5 C 1.50705 * 120.00052 * 179.97438 * 3 2 1 6 6 H 1.08993 * 112.84846 * 311.20469 * 5 3 2 7 7 C 1.53779 * 113.60810 * 82.50995 * 5 3 2 8 8 C 1.53780 * 87.08158 * 139.98098 * 7 5 3 9 9 H 1.08994 * 113.69358 * 220.00751 * 8 7 5 10 10 N 1.46500 * 113.61678 * 89.11013 * 8 7 5 11 11 C 1.34774 * 119.99770 * 107.50307 * 10 8 7 12 12 O 1.21586 * 120.00478 * 0.02562 * 11 10 8 13 13 C 1.47539 * 120.00210 * 180.02562 * 11 10 8 14 14 C 1.40135 * 120.19657 * 180.02562 * 13 11 10 15 15 O 1.35651 * 120.14634 * 359.95468 * 14 13 11 16 16 C 1.42905 * 117.00043 * 180.02562 * 15 14 13 17 17 C 1.38702 * 119.70248 * 180.23240 * 14 13 11 18 18 C 1.38057 * 120.08154 * 359.50995 * 17 14 13 19 19 C 1.38541 * 120.39424 * 0.47063 * 18 17 14 20 20 C 1.50700 * 119.85312 * 179.76402 * 19 18 17 21 21 O 1.42899 * 109.47157 * 245.02102 * 20 19 18 22 22 Si 1.86293 * 109.47000 * 5.02256 * 20 19 18 23 23 C 1.37797 * 120.29629 * 359.78785 * 19 18 17 24 24 C 1.53780 * 113.61194 * 180.02562 * 5 3 2 25 25 H 1.08999 * 109.47170 * 179.97438 * 1 2 3 26 26 H 1.08991 * 109.47282 * 300.00223 * 1 2 3 27 27 H 1.08999 * 109.46785 * 59.99882 * 1 2 3 28 28 H 1.08999 * 113.62139 * 25.43143 * 7 5 3 29 29 H 1.09001 * 113.60891 * 254.52666 * 7 5 3 30 30 H 0.96994 * 120.00258 * 287.50823 * 10 8 7 31 31 H 1.09001 * 109.47103 * 300.00345 * 16 15 14 32 32 H 1.09004 * 109.47054 * 59.99849 * 16 15 14 33 33 H 1.09000 * 109.47187 * 179.97438 * 16 15 14 34 34 H 1.07997 * 119.95821 * 179.72842 * 17 14 13 35 35 H 1.08007 * 119.80255 * 180.21741 * 18 17 14 36 36 H 1.09005 * 109.46806 * 125.02165 * 20 19 18 37 37 H 0.96697 * 114.00348 * 180.02562 * 21 20 19 38 38 H 1.48494 * 110.00047 * 299.99785 * 22 20 19 39 39 H 1.48500 * 109.99995 * 61.31969 * 22 20 19 40 40 H 1.08000 * 120.04230 * 179.97438 * 23 19 18 41 41 H 1.09000 * 113.61183 * 105.47567 * 24 5 3 42 42 H 1.08996 * 113.69208 * 334.58278 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 0.0006 6 1 4.0234 0.6364 0.7566 7 6 4.1916 1.1233 -1.3962 8 6 5.1814 2.2266 -0.9866 9 1 5.3978 2.9386 -1.7830 10 7 6.3906 1.7178 -0.3344 11 6 7.5671 1.7309 -0.9918 12 8 7.6251 2.1654 -2.1259 13 6 8.7847 1.2179 -0.3353 14 6 10.0102 1.2301 -1.0148 15 8 10.0827 1.7129 -2.2804 16 6 11.3654 1.6929 -2.9099 17 6 11.1476 0.7408 -0.3896 18 6 11.0731 0.2538 0.9001 19 6 9.8635 0.2405 1.5755 20 6 9.7951 -0.2989 2.9810 21 8 8.9826 -1.4742 3.0012 22 14 11.5119 -0.7206 3.5686 23 6 8.7226 0.7177 0.9677 24 6 4.1078 2.7142 0.0011 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8899 27 1 -0.3633 0.5139 -0.8900 28 1 3.5243 1.4146 -2.2073 29 1 4.6620 0.1540 -1.5611 30 1 6.3444 1.3714 0.5704 31 1 12.0655 2.2918 -2.3274 32 1 11.7261 0.6658 -2.9672 33 1 11.2831 2.1052 -3.9156 34 1 12.0933 0.7442 -0.9110 35 1 11.9622 -0.1228 1.3839 36 1 9.3608 0.4544 3.6385 37 1 8.8936 -1.8759 3.8763 38 1 12.1149 -1.7466 2.6805 39 1 12.3580 0.4997 3.5825 40 1 7.7818 0.7049 1.4979 41 1 4.5106 3.0288 0.9639 42 1 3.4184 3.4416 -0.4273 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_12496546.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:03:07 Heat of formation + Delta-G solvation = -120.107051 kcal Electronic energy + Delta-G solvation = -27155.546203 eV Core-core repulsion = 23069.410442 eV Total energy + Delta-G solvation = -4086.135761 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.134 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.06537 -41.59681 -40.39810 -39.16034 -38.85504 -37.29727 -37.24633 -34.43010 -32.57173 -31.97635 -29.40971 -28.64156 -27.07977 -26.88571 -26.18609 -25.19344 -23.00741 -22.21854 -21.50837 -20.40153 -19.47431 -18.89338 -18.53275 -18.14360 -17.69389 -17.67910 -17.31198 -16.84393 -16.79382 -16.21456 -16.02640 -15.79897 -15.58112 -15.38714 -14.99901 -14.72660 -14.42340 -14.20246 -14.17198 -13.95779 -13.77617 -13.55697 -13.38301 -13.12478 -13.00270 -12.81542 -12.54407 -12.32772 -12.12080 -11.97401 -11.86425 -11.77075 -11.74956 -11.27373 -10.82657 -10.40629 -10.27797 -10.05430 -9.31407 -5.07122 -0.30836 0.15246 1.17502 1.19053 1.54010 1.73725 1.80720 1.85825 2.03309 2.18220 2.65118 3.19955 3.25268 3.29513 3.43937 3.53343 3.65909 3.72673 3.73888 3.94393 3.99033 4.02503 4.14589 4.17579 4.18469 4.19949 4.26191 4.39425 4.45161 4.53390 4.57241 4.59742 4.62646 4.70673 4.76361 4.83568 4.83988 4.95096 5.02121 5.19923 5.41812 5.43223 5.52055 6.23884 6.48713 6.51717 6.76566 7.28834 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.357 6.357 3 C 0.470 3.530 4 O -0.504 6.504 5 C -0.113 4.113 6 H 0.125 0.875 7 C -0.132 4.132 8 C 0.125 3.875 9 H 0.115 0.885 10 N -0.715 5.715 11 C 0.567 3.433 12 O -0.510 6.510 13 C -0.174 4.174 14 C 0.194 3.806 15 O -0.278 6.278 16 C 0.018 3.982 17 C -0.212 4.212 18 C -0.053 4.053 19 C -0.123 4.123 20 C -0.066 4.066 21 O -0.546 6.546 22 Si 0.681 3.319 23 C -0.016 4.016 24 C -0.125 4.125 25 H 0.103 0.897 26 H 0.064 0.936 27 H 0.064 0.936 28 H 0.099 0.901 29 H 0.088 0.912 30 H 0.400 0.600 31 H 0.058 0.942 32 H 0.058 0.942 33 H 0.107 0.893 34 H 0.141 0.859 35 H 0.126 0.874 36 H 0.076 0.924 37 H 0.383 0.617 38 H -0.250 1.250 39 H -0.254 1.254 40 H 0.137 0.863 41 H 0.086 0.914 42 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.245 -2.964 5.693 6.800 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.313 3.687 4 O -0.392 6.392 5 C -0.132 4.132 6 H 0.143 0.857 7 C -0.171 4.171 8 C 0.019 3.981 9 H 0.133 0.867 10 N -0.368 5.368 11 C 0.355 3.645 12 O -0.385 6.385 13 C -0.178 4.178 14 C 0.145 3.855 15 O -0.188 6.188 16 C -0.077 4.077 17 C -0.231 4.231 18 C -0.070 4.070 19 C -0.124 4.124 20 C -0.177 4.177 21 O -0.353 6.353 22 Si 0.582 3.418 23 C -0.035 4.035 24 C -0.163 4.163 25 H 0.121 0.879 26 H 0.082 0.918 27 H 0.082 0.918 28 H 0.117 0.883 29 H 0.106 0.894 30 H 0.235 0.765 31 H 0.077 0.923 32 H 0.077 0.923 33 H 0.125 0.875 34 H 0.159 0.841 35 H 0.143 0.857 36 H 0.094 0.906 37 H 0.231 0.769 38 H -0.175 1.175 39 H -0.179 1.179 40 H 0.155 0.845 41 H 0.104 0.896 42 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 2.723 -2.131 3.866 5.187 hybrid contribution -0.315 -0.054 0.264 0.415 sum 2.409 -2.186 4.131 5.258 Atomic orbital electron populations 1.23317 0.76006 1.03977 1.02698 1.86525 1.23684 1.33371 1.83795 1.23578 0.91674 0.81410 0.72063 1.90685 1.66976 1.36430 1.45062 1.22659 0.87590 1.01052 1.01893 0.85719 1.23406 0.97853 1.01349 0.94509 1.21767 0.83398 0.96315 0.96591 0.86680 1.45567 1.07340 1.65352 1.18534 1.17895 0.82544 0.78376 0.85730 1.90854 1.85443 1.44888 1.17352 1.19290 0.92305 1.10522 0.95645 1.19046 0.92445 0.89627 0.84355 1.86380 1.32406 1.76163 1.23863 1.23248 0.83605 1.02017 0.98795 1.21182 0.98435 1.06688 0.96769 1.20887 0.96887 0.95515 0.93747 1.19106 0.93490 1.03937 0.95844 1.24574 1.07234 0.90014 0.95829 1.86492 1.71888 1.41248 1.35627 0.95191 0.75063 0.82426 0.89112 1.20948 0.98264 0.92388 0.91872 1.23376 0.97032 0.94777 1.01070 0.87883 0.91752 0.91762 0.88287 0.89372 0.76472 0.92325 0.92323 0.87513 0.84128 0.85711 0.90646 0.76908 1.17495 1.17890 0.84524 0.89586 0.86894 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.61 10.57 -39.25 -0.41 -1.03 16 3 C 0.47 0.94 7.48 36.01 0.27 1.21 16 4 O -0.50 -2.41 15.65 -18.75 -0.29 -2.70 16 5 C -0.11 0.09 4.14 -90.96 -0.38 -0.28 16 6 H 0.12 -0.35 8.14 -51.93 -0.42 -0.77 16 7 C -0.13 0.06 7.43 -25.92 -0.19 -0.13 16 8 C 0.12 0.00 4.33 -67.10 -0.29 -0.29 16 9 H 0.12 0.18 7.46 -51.93 -0.39 -0.21 16 10 N -0.71 -0.08 5.21 -54.04 -0.28 -0.36 16 11 C 0.57 2.05 7.76 -12.47 -0.10 1.95 16 12 O -0.51 -3.75 14.76 -16.59 -0.24 -4.00 16 13 C -0.17 -0.48 5.89 -104.84 -0.62 -1.10 16 14 C 0.19 0.64 6.70 -38.70 -0.26 0.38 16 15 O -0.28 -1.14 8.57 -40.53 -0.35 -1.49 16 16 C 0.02 0.00 9.81 101.05 0.99 0.99 16 17 C -0.21 -0.30 9.03 -39.48 -0.36 -0.66 16 18 C -0.05 -0.07 8.65 -39.54 -0.34 -0.41 16 19 C -0.12 -0.11 5.38 -104.67 -0.56 -0.68 16 20 C -0.07 0.11 2.78 36.01 0.10 0.21 16 21 O -0.55 0.81 12.81 -35.23 -0.45 0.36 16 22 Si 0.68 -1.50 29.84 -169.99 -5.07 -6.58 16 23 C -0.02 -0.01 9.16 -39.19 -0.36 -0.37 16 24 C -0.12 0.13 7.15 -25.90 -0.19 -0.06 16 25 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 26 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 27 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 28 H 0.10 -0.03 8.09 -51.93 -0.42 -0.45 16 29 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 30 H 0.40 -1.01 6.73 -40.82 -0.27 -1.28 16 31 H 0.06 -0.09 7.67 -51.93 -0.40 -0.49 16 32 H 0.06 -0.09 7.65 -51.93 -0.40 -0.48 16 33 H 0.11 -0.14 8.14 -51.93 -0.42 -0.56 16 34 H 0.14 -0.12 6.30 -52.49 -0.33 -0.45 16 35 H 0.13 0.05 4.84 -52.48 -0.25 -0.20 16 36 H 0.08 -0.26 7.96 -51.93 -0.41 -0.68 16 37 H 0.38 -2.41 8.74 45.56 0.40 -2.01 16 38 H -0.25 -0.23 7.04 56.52 0.40 0.17 16 39 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 40 H 0.14 -0.28 6.40 -52.49 -0.34 -0.62 16 41 H 0.09 -0.18 8.14 -51.93 -0.42 -0.61 16 42 H 0.11 0.01 7.44 -51.93 -0.39 -0.38 16 LS Contribution 354.06 15.07 5.34 5.34 Total: 0.00 -11.01 354.06 -8.34 -19.35 By element: Atomic # 1 Polarization: -5.35 SS G_CDS: -5.36 Total: -10.71 kcal Atomic # 6 Polarization: 3.02 SS G_CDS: -1.21 Total: 1.81 kcal Atomic # 7 Polarization: -0.08 SS G_CDS: -0.28 Total: -0.36 kcal Atomic # 8 Polarization: -7.10 SS G_CDS: -1.75 Total: -8.86 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: -5.07 Total: -6.58 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -11.01 -8.34 -19.35 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_12496546.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.761 kcal (2) G-P(sol) polarization free energy of solvation -11.007 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.768 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.339 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.346 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.107 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds