Wall clock time and date at job start Sat Mar 6 2021 16:03:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45207 * 1 3 3 C 1.34229 * 116.99482 * 2 1 4 4 O 1.20821 * 120.00355 * 359.97438 * 3 2 1 5 5 C 1.50706 * 119.99834 * 179.97438 * 3 2 1 6 6 H 1.09004 * 112.84715 * 48.80407 * 5 3 2 7 7 C 1.53780 * 113.61314 * 179.97438 * 5 3 2 8 8 C 1.53782 * 87.07891 * 140.06831 * 7 5 3 9 9 H 1.09006 * 113.61152 * 219.93230 * 8 7 5 10 10 N 1.46494 * 113.61852 * 89.11458 * 8 7 5 11 11 C 1.34775 * 120.00361 * 154.99655 * 10 8 7 12 12 O 1.21570 * 119.99868 * 0.02562 * 11 10 8 13 13 C 1.47730 * 120.00345 * 179.97438 * 11 10 8 14 14 C 1.39635 * 120.11789 * 180.20661 * 13 11 10 15 15 C 1.37846 * 119.87614 * 180.27596 * 14 13 11 16 16 C 1.50707 * 119.94170 * 179.77217 * 15 14 13 17 17 O 1.42903 * 109.46442 * 14.72651 * 16 15 14 18 18 Si 1.86293 * 109.47256 * 134.72218 * 16 15 14 19 19 C 1.38639 * 120.12362 * 359.49677 * 15 14 13 20 20 F 1.35095 * 119.88514 * 180.24970 * 19 15 14 21 21 C 1.38674 * 120.23083 * 0.27623 * 19 15 14 22 22 C 1.37816 * 120.12409 * 359.97438 * 21 19 15 23 23 C 1.53774 * 113.69143 * 277.53402 * 5 3 2 24 24 H 1.08996 * 109.46913 * 60.00535 * 1 2 3 25 25 H 1.09000 * 109.46760 * 179.97438 * 1 2 3 26 26 H 1.08998 * 109.47123 * 300.00530 * 1 2 3 27 27 H 1.08997 * 113.61950 * 25.51483 * 7 5 3 28 28 H 1.09003 * 113.68658 * 254.62368 * 7 5 3 29 29 H 0.97008 * 119.99818 * 335.00257 * 10 8 7 30 30 H 1.08002 * 120.05894 * 0.02968 * 14 13 11 31 31 H 1.08999 * 109.47345 * 254.72721 * 16 15 14 32 32 H 0.96700 * 114.00311 * 60.00230 * 17 16 15 33 33 H 1.48501 * 109.99918 * 58.68485 * 18 16 15 34 34 H 1.48506 * 109.99973 * 180.02562 * 18 16 15 35 35 H 1.08001 * 119.93377 * 179.97438 * 21 19 15 36 36 H 1.07999 * 120.06048 * 180.02562 * 22 21 19 37 37 H 1.09008 * 113.61377 * 105.45557 * 23 5 3 38 38 H 1.09005 * 113.61304 * 334.55988 * 23 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2750 0.0006 6 1 4.0240 0.6363 -0.7550 7 6 4.1076 2.7144 -0.0001 8 6 5.1820 2.2271 0.9865 9 1 5.3988 2.9394 1.7826 10 7 6.3907 1.7182 0.3337 11 6 7.5676 1.7315 0.9903 12 8 7.6261 2.1655 2.1243 13 6 8.7864 1.2177 0.3323 14 6 10.0062 1.2265 1.0118 15 6 11.1415 0.7511 0.3910 16 6 12.4598 0.7646 1.1212 17 8 12.2299 0.9807 2.5149 18 14 13.3201 -0.8701 0.8798 19 6 11.0718 0.2554 -0.9019 20 9 12.1864 -0.2140 -1.5038 21 6 9.8620 0.2401 -1.5795 22 6 8.7218 0.7176 -0.9701 23 6 4.1925 1.1233 1.3968 24 1 -0.3633 0.5137 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5139 0.8899 27 1 3.4176 3.4407 0.4293 28 1 4.5099 3.0305 -0.9626 29 1 6.3439 1.3716 -0.5711 30 1 10.0609 1.6086 2.0205 31 1 13.0851 1.5659 0.7275 32 1 11.6794 0.3041 2.9324 33 1 13.5363 -1.1214 -0.5677 34 1 14.6213 -0.8698 1.5956 35 1 9.8132 -0.1469 -2.5866 36 1 7.7801 0.7048 -1.4987 37 1 4.6631 0.1539 1.5614 38 1 3.5255 1.4143 2.2084 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_12496548.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:03:10 Heat of formation + Delta-G solvation = -125.496073 kcal Electronic energy + Delta-G solvation = -24957.415798 eV Core-core repulsion = 20875.812187 eV Total energy + Delta-G solvation = -4081.603611 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.109 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -50.42493 -42.12634 -41.32980 -40.16044 -38.98928 -37.73293 -37.35782 -34.65789 -32.73543 -31.99397 -29.47530 -27.45697 -26.99892 -26.92724 -25.04001 -23.35262 -22.58170 -21.77737 -20.56001 -19.46119 -19.02528 -18.65287 -18.00563 -17.88395 -17.69442 -17.39434 -17.15409 -16.94071 -16.19491 -16.06620 -15.81520 -15.70068 -15.23609 -15.15029 -14.89635 -14.73302 -14.30700 -14.11714 -13.86173 -13.66918 -13.59727 -13.38127 -13.19471 -12.90552 -12.83883 -12.39163 -11.99121 -11.88447 -11.81847 -11.38488 -11.36285 -11.12544 -10.95186 -10.31916 -10.14226 -9.77872 -5.04996 -0.58359 -0.08923 1.11361 1.18836 1.56191 1.63461 1.66333 1.83518 1.99366 2.50393 2.90839 3.08926 3.14218 3.18702 3.26372 3.43507 3.52326 3.59064 3.63073 3.79610 3.90590 4.00809 4.12898 4.20764 4.30531 4.33397 4.41858 4.49399 4.55603 4.59886 4.64251 4.67583 4.72103 4.75455 4.83470 4.94897 4.98080 5.33096 5.35021 5.50145 6.25612 6.41042 6.69118 7.02114 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.503 6.503 5 C -0.113 4.113 6 H 0.125 0.875 7 C -0.125 4.125 8 C 0.122 3.878 9 H 0.117 0.883 10 N -0.711 5.711 11 C 0.566 3.434 12 O -0.524 6.524 13 C -0.143 4.143 14 C -0.019 4.019 15 C -0.154 4.154 16 C -0.066 4.066 17 O -0.535 6.535 18 Si 0.682 3.318 19 C 0.119 3.881 20 F -0.121 7.121 21 C -0.151 4.151 22 C -0.059 4.059 23 C -0.131 4.131 24 H 0.064 0.936 25 H 0.103 0.897 26 H 0.064 0.936 27 H 0.114 0.886 28 H 0.086 0.914 29 H 0.401 0.599 30 H 0.157 0.843 31 H 0.123 0.877 32 H 0.382 0.618 33 H -0.229 1.229 34 H -0.258 1.258 35 H 0.147 0.853 36 H 0.137 0.863 37 H 0.088 0.912 38 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.526 -4.479 -2.694 5.805 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.390 6.390 5 C -0.132 4.132 6 H 0.143 0.857 7 C -0.163 4.163 8 C 0.017 3.983 9 H 0.135 0.865 10 N -0.363 5.363 11 C 0.353 3.647 12 O -0.400 6.400 13 C -0.146 4.146 14 C -0.037 4.037 15 C -0.156 4.156 16 C -0.176 4.176 17 O -0.341 6.341 18 Si 0.582 3.418 19 C 0.100 3.900 20 F -0.099 7.099 21 C -0.170 4.170 22 C -0.078 4.078 23 C -0.170 4.170 24 H 0.083 0.917 25 H 0.122 0.878 26 H 0.083 0.917 27 H 0.132 0.868 28 H 0.105 0.895 29 H 0.237 0.763 30 H 0.174 0.826 31 H 0.140 0.860 32 H 0.229 0.771 33 H -0.152 1.152 34 H -0.183 1.183 35 H 0.164 0.836 36 H 0.155 0.845 37 H 0.107 0.893 38 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -1.600 -3.769 -2.316 4.704 hybrid contribution -0.342 0.364 -0.974 1.094 sum -1.941 -3.405 -3.290 5.118 Atomic orbital electron populations 1.23327 0.75911 1.04025 1.02739 1.86519 1.23757 1.33330 1.83791 1.23552 0.91658 0.81448 0.72150 1.90692 1.66962 1.36434 1.44961 1.22658 0.87715 1.01005 1.01853 0.85748 1.23374 0.96984 0.94860 1.01071 1.21824 0.83350 0.96462 0.96686 0.86525 1.45574 1.07408 1.64740 1.18575 1.18117 0.82815 0.78084 0.85658 1.90836 1.85736 1.45647 1.17788 1.19927 0.94244 1.05026 0.95394 1.20975 0.88980 0.92932 1.00846 1.20378 0.98125 1.02955 0.94125 1.25015 0.96642 1.12298 0.83617 1.86525 1.74387 1.53784 1.19355 0.95254 0.83026 0.81127 0.82422 1.17783 0.83338 0.97524 0.91393 1.91584 1.49639 1.85394 1.83278 1.21097 0.91001 1.03284 1.01631 1.21160 0.98376 0.94930 0.93328 1.23407 0.97777 1.01205 0.94605 0.91744 0.87842 0.91709 0.86801 0.89526 0.76285 0.82587 0.85954 0.77051 1.15233 1.18318 0.83560 0.84485 0.89288 0.88171 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.22 10.57 -39.26 -0.41 -0.63 16 3 C 0.47 0.38 7.49 36.01 0.27 0.65 16 4 O -0.50 -1.91 15.65 -18.75 -0.29 -2.20 16 5 C -0.11 0.28 4.13 -90.96 -0.38 -0.10 16 6 H 0.12 -0.58 8.14 -51.93 -0.42 -1.00 16 7 C -0.12 0.32 7.15 -25.92 -0.19 0.13 16 8 C 0.12 -0.25 4.33 -67.10 -0.29 -0.54 16 9 H 0.12 -0.05 7.46 -51.93 -0.39 -0.43 16 10 N -0.71 1.86 5.21 -53.98 -0.28 1.58 16 11 C 0.57 0.16 7.77 -12.38 -0.10 0.07 16 12 O -0.52 -2.18 15.94 5.30 0.08 -2.10 16 13 C -0.14 0.14 5.87 -104.97 -0.62 -0.48 16 14 C -0.02 0.00 8.77 -39.20 -0.34 -0.34 16 15 C -0.15 0.08 5.13 -104.61 -0.54 -0.46 16 16 C -0.07 0.02 2.97 36.01 0.11 0.13 16 17 O -0.54 0.05 11.64 -35.23 -0.41 -0.36 16 18 Si 0.68 -0.55 30.81 -169.99 -5.24 -5.78 16 19 C 0.12 -0.06 6.67 -39.27 -0.26 -0.32 16 20 F -0.12 -0.12 12.82 2.25 0.03 -0.09 16 21 C -0.15 0.36 10.01 -39.57 -0.40 -0.04 16 22 C -0.06 0.19 9.54 -39.21 -0.37 -0.19 16 23 C -0.13 0.31 7.43 -25.90 -0.19 0.12 16 24 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 25 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 26 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 27 H 0.11 -0.14 7.44 -51.93 -0.39 -0.53 16 28 H 0.09 -0.31 8.14 -51.93 -0.42 -0.74 16 29 H 0.40 -2.18 6.73 -40.82 -0.27 -2.46 16 30 H 0.16 0.05 6.65 -52.49 -0.35 -0.30 16 31 H 0.12 0.02 7.96 -51.93 -0.41 -0.40 16 32 H 0.38 -1.52 8.42 45.56 0.38 -1.14 16 33 H -0.23 -0.32 5.27 56.52 0.30 -0.02 16 34 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 35 H 0.15 -0.61 8.06 -52.49 -0.42 -1.03 16 36 H 0.14 -0.87 6.40 -52.49 -0.34 -1.21 16 37 H 0.09 -0.23 8.14 -51.92 -0.42 -0.65 16 38 H 0.10 -0.20 8.10 -51.93 -0.42 -0.62 16 LS Contribution 328.88 15.07 4.96 4.96 Total: 0.00 -9.23 328.88 -8.24 -17.47 By element: Atomic # 1 Polarization: -8.07 SS G_CDS: -4.44 Total: -12.51 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: -2.23 Total: -0.33 kcal Atomic # 7 Polarization: 1.86 SS G_CDS: -0.28 Total: 1.58 kcal Atomic # 8 Polarization: -4.26 SS G_CDS: -1.03 Total: -5.29 kcal Atomic # 9 Polarization: -0.12 SS G_CDS: 0.03 Total: -0.09 kcal Atomic # 14 Polarization: -0.55 SS G_CDS: -5.24 Total: -5.78 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -9.23 -8.24 -17.47 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_12496548.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.025 kcal (2) G-P(sol) polarization free energy of solvation -9.234 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.259 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.237 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.471 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.496 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds