Wall clock time and date at job start Sat Mar 6 2021 16:03:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34224 * 116.99687 * 2 1 4 4 O 1.20830 * 120.00561 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99863 * 180.02562 * 3 2 1 6 6 H 1.08998 * 112.85014 * 48.80669 * 5 3 2 7 7 C 1.53787 * 113.61606 * 179.97438 * 5 3 2 8 8 C 1.53775 * 87.07950 * 139.98207 * 7 5 3 9 9 H 1.09000 * 113.61737 * 219.93452 * 8 7 5 10 10 N 1.46503 * 113.61476 * 89.11655 * 8 7 5 11 11 C 1.34779 * 120.00017 * 154.99389 * 10 8 7 12 12 O 1.21284 * 119.99887 * 0.02562 * 11 10 8 13 13 C 1.50698 * 120.00038 * 180.02562 * 11 10 8 14 14 N 1.46502 * 109.47241 * 180.02562 * 13 11 10 15 15 C 1.35039 * 125.93102 * 125.00063 * 14 13 11 16 16 C 1.35086 * 107.97524 * 179.72376 * 15 14 13 17 17 C 1.50701 * 126.07044 * 180.25738 * 16 15 14 18 18 O 1.42902 * 109.46986 * 105.26631 * 17 16 15 19 19 Si 1.86298 * 109.47311 * 345.26150 * 17 16 15 20 20 C 1.40847 * 107.85110 * 0.40195 * 16 15 14 21 21 C 1.48413 * 126.03595 * 179.86315 * 20 16 15 22 22 C 1.39322 * 120.12113 * 137.17869 * 21 20 16 23 23 C 1.38022 * 119.88474 * 179.97438 * 22 21 20 24 24 C 1.38322 * 120.11282 * 359.97438 * 23 22 21 25 25 C 1.38318 * 120.24506 * 0.02562 * 24 23 22 26 26 C 1.38021 * 120.11779 * 0.02562 * 25 24 23 27 27 N 1.31618 * 107.92035 * 359.59587 * 20 16 15 28 28 C 1.53775 * 113.61827 * 277.49835 * 5 3 2 29 29 H 1.09005 * 109.46981 * 299.99437 * 1 2 3 30 30 H 1.09000 * 109.47537 * 59.99744 * 1 2 3 31 31 H 1.09000 * 109.47005 * 180.02562 * 1 2 3 32 32 H 1.09000 * 113.60781 * 25.43589 * 7 5 3 33 33 H 1.08998 * 113.69199 * 254.54096 * 7 5 3 34 34 H 0.96999 * 119.99818 * 335.00501 * 10 8 7 35 35 H 1.09001 * 109.47283 * 60.00444 * 13 11 10 36 36 H 1.09001 * 109.47516 * 300.00904 * 13 11 10 37 37 H 1.07997 * 126.01140 * 0.02562 * 15 14 13 38 38 H 1.09005 * 109.47176 * 225.26332 * 17 16 15 39 39 H 0.96697 * 113.99957 * 299.99313 * 18 17 16 40 40 H 1.48497 * 110.00100 * 58.68596 * 19 17 16 41 41 H 1.48508 * 109.99916 * 180.02562 * 19 17 16 42 42 H 1.08001 * 120.05745 * 359.97438 * 22 21 20 43 43 H 1.07997 * 119.94731 * 180.02562 * 23 22 21 44 44 H 1.08009 * 119.87468 * 179.72841 * 24 23 22 45 45 H 1.07997 * 119.93768 * 179.97438 * 25 24 23 46 46 H 1.08005 * 120.05644 * 180.02562 * 26 25 24 47 47 H 1.09003 * 113.61584 * 105.46641 * 28 5 3 48 48 H 1.09003 * 113.61373 * 334.56603 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0233 0.6366 -0.7567 7 6 4.1077 2.7143 -0.0011 8 6 5.1813 2.2271 0.9861 9 1 5.3978 2.9393 1.7823 10 7 6.3905 1.7180 0.3341 11 6 7.5671 1.7314 0.9913 12 8 7.6248 2.1646 2.1227 13 6 8.8109 1.2083 0.3204 14 7 9.9480 1.3309 1.2360 15 6 10.7693 0.3294 1.6181 16 6 11.6919 0.8449 2.4595 17 6 12.8101 0.0840 3.1241 18 8 14.0479 0.4003 2.4838 19 14 12.4869 -1.7452 2.9819 20 6 11.4210 2.2191 2.6078 21 6 12.1868 3.1744 3.4466 22 6 12.4954 4.4421 2.9581 23 6 13.2074 5.3268 3.7426 24 6 13.6139 4.9569 5.0119 25 6 13.3102 3.6996 5.5019 26 6 12.5997 2.8067 4.7255 27 7 10.3723 2.5074 1.8667 28 6 4.1917 1.1233 1.3960 29 1 -0.3633 0.5138 0.8901 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3633 -1.0277 0.0005 32 1 3.4173 3.4405 0.4279 33 1 4.5106 3.0303 -0.9634 34 1 6.3442 1.3714 -0.5707 35 1 9.0072 1.7863 -0.5826 36 1 8.6683 0.1602 0.0570 37 1 10.7034 -0.7013 1.3023 38 1 12.8639 0.3626 4.1766 39 1 14.0718 0.1786 1.5428 40 1 12.3798 -2.1325 1.5523 41 1 13.5824 -2.5068 3.6341 42 1 12.1781 4.7320 1.9673 43 1 13.4468 6.3100 3.3651 44 1 14.1746 5.6507 5.6208 45 1 13.6305 3.4158 6.4935 46 1 12.3628 1.8253 5.1092 47 1 4.6621 0.1539 1.5609 48 1 3.5244 1.4144 2.2072 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_12622748.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:03:13 Heat of formation + Delta-G solvation = -1.877553 kcal Electronic energy + Delta-G solvation = -32727.306998 eV Core-core repulsion = 28138.374763 eV Total energy + Delta-G solvation = -4588.932234 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.156 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -42.48421 -42.04560 -40.87779 -39.68083 -39.17780 -37.74523 -37.37850 -34.85572 -34.41572 -32.25667 -31.81892 -31.30769 -29.64370 -28.75179 -27.03767 -26.97563 -25.93836 -24.16481 -23.29492 -22.65732 -22.12039 -21.54349 -20.91316 -20.54853 -19.11713 -18.73203 -18.37321 -17.81264 -17.56461 -17.42344 -17.40610 -16.91439 -16.60771 -16.23010 -16.14285 -15.71203 -15.58160 -15.49367 -15.21956 -15.10035 -14.84080 -14.47741 -14.32210 -14.17102 -14.10094 -13.90315 -13.74012 -13.66815 -13.49115 -13.30312 -13.18949 -12.92322 -12.49650 -12.27238 -12.03113 -11.99936 -11.91156 -11.83717 -11.76995 -11.57252 -11.38936 -11.24269 -10.61014 -10.32355 -10.27428 -9.69269 -9.67881 -9.19131 -4.94904 0.29378 0.66532 0.79388 1.09224 1.17862 1.34253 1.36141 1.55428 1.64351 1.81311 1.88139 1.98622 3.05781 3.06692 3.15075 3.23991 3.37081 3.51806 3.52463 3.60967 3.62257 3.71429 3.80175 3.88276 4.11196 4.11322 4.17771 4.19188 4.23209 4.31014 4.34994 4.46072 4.47471 4.52620 4.56879 4.61843 4.63378 4.68426 4.69278 4.81339 4.86023 4.92262 5.12458 5.27197 5.29501 5.33107 5.41872 5.72064 5.75988 5.77503 5.81840 6.19253 6.19553 6.55145 6.67144 6.68895 6.97468 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.503 6.503 5 C -0.112 4.112 6 H 0.125 0.875 7 C -0.124 4.124 8 C 0.124 3.876 9 H 0.115 0.885 10 N -0.714 5.714 11 C 0.502 3.498 12 O -0.497 6.497 13 C 0.117 3.883 14 N -0.359 5.359 15 C 0.061 3.939 16 C -0.246 4.246 17 C -0.036 4.036 18 O -0.526 6.526 19 Si 0.680 3.320 20 C 0.133 3.867 21 C -0.008 4.008 22 C -0.092 4.092 23 C -0.121 4.121 24 C -0.113 4.113 25 C -0.120 4.120 26 C -0.092 4.092 27 N -0.247 5.247 28 C -0.131 4.131 29 H 0.064 0.936 30 H 0.064 0.936 31 H 0.103 0.897 32 H 0.113 0.887 33 H 0.086 0.914 34 H 0.403 0.597 35 H 0.119 0.881 36 H 0.130 0.870 37 H 0.178 0.822 38 H 0.115 0.885 39 H 0.371 0.629 40 H -0.259 1.259 41 H -0.255 1.255 42 H 0.122 0.878 43 H 0.124 0.876 44 H 0.123 0.877 45 H 0.126 0.874 46 H 0.125 0.875 47 H 0.087 0.913 48 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.347 -5.123 -3.736 6.761 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.311 3.689 4 O -0.390 6.390 5 C -0.131 4.131 6 H 0.143 0.857 7 C -0.162 4.162 8 C 0.018 3.982 9 H 0.133 0.867 10 N -0.368 5.368 11 C 0.286 3.714 12 O -0.369 6.369 13 C -0.009 4.009 14 N -0.141 5.141 15 C -0.083 4.083 16 C -0.258 4.258 17 C -0.147 4.147 18 O -0.331 6.331 19 Si 0.581 3.419 20 C -0.033 4.033 21 C -0.010 4.010 22 C -0.111 4.111 23 C -0.139 4.139 24 C -0.131 4.131 25 C -0.138 4.138 26 C -0.111 4.111 27 N -0.068 5.068 28 C -0.170 4.170 29 H 0.083 0.917 30 H 0.083 0.917 31 H 0.122 0.878 32 H 0.131 0.869 33 H 0.105 0.895 34 H 0.238 0.762 35 H 0.136 0.864 36 H 0.147 0.853 37 H 0.195 0.805 38 H 0.133 0.867 39 H 0.219 0.781 40 H -0.184 1.184 41 H -0.179 1.179 42 H 0.140 0.860 43 H 0.142 0.858 44 H 0.141 0.859 45 H 0.144 0.856 46 H 0.143 0.857 47 H 0.106 0.894 48 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -3.039 -4.209 -3.113 6.053 hybrid contribution 0.620 -0.423 -1.371 1.563 sum -2.419 -4.632 -4.484 6.886 Atomic orbital electron populations 1.23331 0.75884 1.04040 1.02757 1.86513 1.23785 1.33336 1.83800 1.23559 0.91677 0.81456 0.72177 1.90697 1.66968 1.36424 1.44923 1.22655 0.87708 1.01012 1.01763 0.85696 1.23366 0.96966 0.94847 1.01047 1.21795 0.83296 0.96389 0.96670 0.86724 1.45580 1.07290 1.65294 1.18635 1.20548 0.84329 0.79458 0.87083 1.90854 1.84998 1.43409 1.17615 1.21495 0.82654 1.04908 0.91832 1.47833 1.23268 1.06257 1.36727 1.22282 0.92544 0.94863 0.98654 1.20398 1.03167 0.94346 1.07884 1.24355 0.82493 1.08773 0.99082 1.86635 1.34063 1.85316 1.27103 0.95276 0.89031 0.74682 0.82868 1.20596 0.93494 0.92552 0.96657 1.17694 0.97979 0.92318 0.93030 1.21161 0.97556 0.92460 0.99956 1.21094 0.98659 0.99616 0.94549 1.21257 0.99464 0.96559 0.95860 1.21078 0.98844 0.93878 0.99959 1.21114 0.97452 0.99624 0.92905 1.77811 1.13029 1.04358 1.11565 1.23398 0.97820 1.01114 0.94636 0.91713 0.91719 0.87823 0.86872 0.89495 0.76241 0.86363 0.85264 0.80487 0.86730 0.78145 1.18420 1.17936 0.85982 0.85767 0.85877 0.85597 0.85683 0.89394 0.88250 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.20 10.57 -39.24 -0.41 -0.61 16 3 C 0.47 0.36 7.48 36.01 0.27 0.63 16 4 O -0.50 -1.92 15.65 -18.75 -0.29 -2.22 16 5 C -0.11 0.30 4.14 -90.96 -0.38 -0.08 16 6 H 0.13 -0.63 8.14 -51.93 -0.42 -1.05 16 7 C -0.12 0.32 7.15 -25.92 -0.19 0.14 16 8 C 0.12 -0.27 4.33 -67.10 -0.29 -0.56 16 9 H 0.11 0.01 7.46 -51.93 -0.39 -0.37 16 10 N -0.71 2.58 5.26 -53.00 -0.28 2.30 16 11 C 0.50 -0.29 7.86 -10.99 -0.09 -0.38 16 12 O -0.50 -2.42 15.30 5.55 0.08 -2.33 16 13 C 0.12 -0.38 6.99 -5.19 -0.04 -0.42 16 14 N -0.36 -0.36 3.40 -62.58 -0.21 -0.57 16 15 C 0.06 -0.02 9.96 -17.26 -0.17 -0.19 16 16 C -0.25 -0.40 5.35 -104.76 -0.56 -0.96 16 17 C -0.04 -0.02 2.51 36.01 0.09 0.07 16 18 O -0.53 -1.08 12.88 -35.23 -0.45 -1.54 16 19 Si 0.68 -0.85 30.80 -169.99 -5.24 -6.09 16 20 C 0.13 0.56 6.67 -82.78 -0.55 0.00 16 21 C -0.01 -0.04 5.74 -104.90 -0.60 -0.64 16 22 C -0.09 -0.35 9.78 -39.26 -0.38 -0.74 16 23 C -0.12 -0.31 10.03 -39.63 -0.40 -0.70 16 24 C -0.11 -0.23 10.04 -39.52 -0.40 -0.62 16 25 C -0.12 -0.25 10.03 -39.63 -0.40 -0.65 16 26 C -0.09 -0.27 8.89 -39.26 -0.35 -0.62 16 27 N -0.25 -1.17 11.67 33.43 0.39 -0.78 16 28 C -0.13 0.32 7.43 -25.90 -0.19 0.13 16 29 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 30 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 31 H 0.10 -0.36 8.14 -51.93 -0.42 -0.78 16 32 H 0.11 -0.12 7.43 -51.93 -0.39 -0.50 16 33 H 0.09 -0.32 8.14 -51.93 -0.42 -0.75 16 34 H 0.40 -2.82 8.70 -40.82 -0.36 -3.18 16 35 H 0.12 -0.62 8.14 -51.93 -0.42 -1.04 16 36 H 0.13 -0.97 8.07 -51.93 -0.42 -1.38 16 37 H 0.18 -0.68 6.32 -52.49 -0.33 -1.01 16 38 H 0.12 0.05 5.56 -51.93 -0.29 -0.23 16 39 H 0.37 -0.35 8.70 45.56 0.40 0.05 16 40 H -0.26 0.12 7.00 56.52 0.40 0.51 16 41 H -0.25 -0.55 7.11 56.52 0.40 -0.14 16 42 H 0.12 0.41 8.06 -52.49 -0.42 -0.01 16 43 H 0.12 0.07 8.06 -52.49 -0.42 -0.36 16 44 H 0.12 -0.01 8.06 -52.48 -0.42 -0.43 16 45 H 0.13 -0.01 8.06 -52.49 -0.42 -0.43 16 46 H 0.13 0.17 6.21 -52.48 -0.33 -0.16 16 47 H 0.09 -0.25 8.14 -51.93 -0.42 -0.67 16 48 H 0.10 -0.18 8.09 -51.93 -0.42 -0.60 16 LS Contribution 410.33 15.07 6.18 6.18 Total: 0.00 -13.56 410.33 -10.15 -23.72 By element: Atomic # 1 Polarization: -7.14 SS G_CDS: -6.37 Total: -13.51 kcal Atomic # 6 Polarization: -1.00 SS G_CDS: -3.55 Total: -4.55 kcal Atomic # 7 Polarization: 1.05 SS G_CDS: -0.10 Total: 0.95 kcal Atomic # 8 Polarization: -5.62 SS G_CDS: -1.08 Total: -6.70 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.24 Total: -6.09 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -13.56 -10.15 -23.72 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_12622748.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.840 kcal (2) G-P(sol) polarization free energy of solvation -13.564 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.276 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.154 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.717 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.878 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds