Wall clock time and date at job start Sat Mar 6 2021 16:03:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34228 * 116.99985 * 2 1 4 4 O 1.20826 * 120.00319 * 359.97438 * 3 2 1 5 5 C 1.50706 * 120.00394 * 179.97438 * 3 2 1 6 6 H 1.09000 * 112.85007 * 311.20117 * 5 3 2 7 7 C 1.53781 * 113.60776 * 82.50380 * 5 3 2 8 8 C 1.53783 * 87.08007 * 139.98476 * 7 5 3 9 9 H 1.09000 * 113.69272 * 220.00717 * 8 7 5 10 10 N 1.46500 * 113.61386 * 89.11464 * 8 7 5 11 11 C 1.34774 * 120.00185 * 107.50719 * 10 8 7 12 12 O 1.21632 * 119.99645 * 359.97438 * 11 10 8 13 13 C 1.47292 * 120.00548 * 179.97438 * 11 10 8 14 14 C 1.40361 * 120.05100 * 179.97438 * 13 11 10 15 15 O 1.35676 * 120.13831 * 359.95872 * 14 13 11 16 16 C 1.38320 * 119.72770 * 179.97438 * 14 13 11 17 17 C 1.39570 * 119.81227 * 0.02562 * 16 14 13 18 18 C 1.47565 * 119.95612 * 179.97438 * 17 16 14 19 19 C 1.36108 * 125.94616 * 179.97438 * 18 17 16 20 20 C 1.40789 * 106.73530 * 180.02562 * 19 18 17 21 21 C 1.34842 * 107.05073 * 0.02562 * 20 19 18 22 22 C 1.50700 * 125.65423 * 180.02562 * 21 20 19 23 23 O 1.42905 * 109.46885 * 64.99664 * 22 21 20 24 24 Si 1.86297 * 109.47013 * 184.99582 * 22 21 20 25 25 O 1.34230 * 108.69018 * 359.73312 * 21 20 19 26 26 C 1.39966 * 120.08698 * 359.97438 * 17 16 14 27 27 C 1.36386 * 120.27784 * 359.74257 * 26 17 16 28 28 C 1.53780 * 87.08117 * 334.56585 * 8 7 5 29 29 H 1.09002 * 109.47379 * 299.99940 * 1 2 3 30 30 H 1.09001 * 109.46782 * 180.02562 * 1 2 3 31 31 H 1.09004 * 109.47085 * 60.00143 * 1 2 3 32 32 H 1.09004 * 113.61426 * 254.52663 * 7 5 3 33 33 H 1.09001 * 113.62021 * 25.43661 * 7 5 3 34 34 H 0.97000 * 119.99979 * 287.50237 * 10 8 7 35 35 H 0.96696 * 114.00269 * 89.99797 * 15 14 13 36 36 H 1.08002 * 120.09504 * 180.02562 * 16 14 13 37 37 H 1.07995 * 126.62715 * 359.97438 * 19 18 17 38 38 H 1.08000 * 126.47896 * 179.97438 * 20 19 18 39 39 H 1.08996 * 109.47035 * 305.00387 * 22 21 20 40 40 H 0.96706 * 113.99626 * 60.00431 * 23 22 21 41 41 H 1.48509 * 109.99844 * 179.97438 * 24 22 21 42 42 H 1.48491 * 110.00357 * 301.32108 * 24 22 21 43 43 H 1.08001 * 119.85691 * 180.02562 * 26 17 16 44 44 H 1.08004 * 119.90654 * 180.27673 * 27 26 17 45 45 H 1.08998 * 113.61743 * 270.88807 * 28 8 7 46 46 H 1.08993 * 113.69443 * 139.98862 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2750 0.0006 6 1 4.0234 0.6366 0.7567 7 6 4.1915 1.1234 -1.3962 8 6 5.1814 2.2268 -0.9867 9 1 5.3977 2.9387 -1.7831 10 7 6.3905 1.7179 -0.3345 11 6 7.5670 1.7311 -0.9918 12 8 7.6248 2.1650 -2.1266 13 6 8.7829 1.2200 -0.3360 14 6 10.0086 1.2327 -1.0198 15 8 10.0771 1.7146 -2.2862 16 6 11.1463 0.7517 -0.3974 17 6 11.0679 0.2567 0.9053 18 6 12.2796 -0.2578 1.5721 19 6 12.3429 -0.7656 2.8334 20 6 13.6838 -1.1322 3.0559 21 6 14.3671 -0.8334 1.9325 22 6 15.8417 -1.0561 1.7158 23 8 16.1196 -2.4578 1.7342 24 14 16.3415 -0.3455 0.0678 25 8 13.5148 -0.3108 1.0369 26 6 9.8416 0.2477 1.5799 27 6 8.7187 0.7265 0.9717 28 6 4.1078 2.7143 0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3633 0.5138 -0.8900 32 1 4.6621 0.1541 -1.5611 33 1 3.5242 1.4146 -2.2073 34 1 6.3443 1.3716 0.5704 35 1 10.2650 2.6618 -2.3371 36 1 12.0926 0.7590 -0.9179 37 1 11.5231 -0.8667 3.5291 38 1 14.0889 -1.5694 3.9566 39 1 16.4039 -0.5639 2.5094 40 1 15.6520 -2.9603 1.0530 41 1 17.7939 -0.5581 -0.1576 42 1 15.5591 -0.9859 -1.0197 43 1 9.7853 -0.1358 2.5880 44 1 7.7764 0.7208 1.4995 45 1 3.4174 3.4404 -0.4287 46 1 4.5091 3.0298 0.9635 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_12807986.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:03:21 Heat of formation + Delta-G solvation = -109.220517 kcal Electronic energy + Delta-G solvation = -32565.862199 eV Core-core repulsion = 27776.837901 eV Total energy + Delta-G solvation = -4789.024299 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.134 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -43.78233 -42.10893 -41.43307 -40.22220 -38.84264 -38.21564 -37.86689 -37.32356 -34.69841 -34.20724 -33.20861 -31.36859 -30.57667 -29.42158 -27.47889 -26.96552 -26.67113 -24.58794 -24.14342 -22.83328 -22.34906 -22.10555 -21.42358 -20.51309 -19.72950 -19.16416 -18.65111 -18.50501 -17.85968 -17.67595 -17.53782 -17.37748 -17.28626 -16.66531 -16.48387 -16.15063 -16.06840 -15.87747 -15.49173 -15.39658 -14.97598 -14.78397 -14.43207 -14.29041 -14.22299 -14.05459 -13.81599 -13.81027 -13.67260 -13.57987 -13.45516 -13.18502 -12.98404 -12.88129 -12.79313 -12.08411 -11.98652 -11.88940 -11.82101 -11.79546 -11.34010 -11.18143 -10.87676 -10.86465 -10.67182 -10.20484 -10.01615 -9.07004 -5.03391 -0.84337 0.05712 0.60566 1.07080 1.13403 1.38299 1.41551 1.67062 1.68228 1.88561 1.90248 1.92298 2.57337 2.96196 3.10723 3.12235 3.21313 3.28736 3.46715 3.50969 3.62514 3.66358 3.79921 3.85136 3.89685 3.92864 4.09928 4.14330 4.22160 4.26665 4.32234 4.36841 4.49097 4.52564 4.57643 4.61471 4.62124 4.67263 4.73218 4.76217 4.79396 4.87886 4.93972 5.03266 5.12089 5.33551 5.36743 5.38736 5.42166 5.90562 6.18381 6.33663 6.64660 6.71023 7.13006 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.504 6.504 5 C -0.113 4.113 6 H 0.125 0.875 7 C -0.132 4.132 8 C 0.124 3.876 9 H 0.116 0.884 10 N -0.713 5.713 11 C 0.563 3.437 12 O -0.513 6.513 13 C -0.166 4.166 14 C 0.180 3.820 15 O -0.474 6.474 16 C -0.141 4.141 17 C 0.032 3.968 18 C 0.022 3.978 19 C -0.177 4.177 20 C -0.173 4.173 21 C -0.043 4.043 22 C -0.035 4.035 23 O -0.520 6.520 24 Si 0.698 3.302 25 O -0.162 6.162 26 C -0.116 4.116 27 C -0.064 4.064 28 C -0.124 4.124 29 H 0.064 0.936 30 H 0.103 0.897 31 H 0.064 0.936 32 H 0.088 0.912 33 H 0.099 0.901 34 H 0.400 0.600 35 H 0.400 0.600 36 H 0.144 0.856 37 H 0.156 0.844 38 H 0.156 0.844 39 H 0.138 0.862 40 H 0.381 0.619 41 H -0.248 1.248 42 H -0.255 1.255 43 H 0.139 0.861 44 H 0.136 0.864 45 H 0.113 0.887 46 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.079 0.201 4.687 4.692 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.391 6.391 5 C -0.132 4.132 6 H 0.142 0.858 7 C -0.171 4.171 8 C 0.018 3.982 9 H 0.134 0.866 10 N -0.366 5.366 11 C 0.351 3.649 12 O -0.388 6.388 13 C -0.170 4.170 14 C 0.134 3.866 15 O -0.286 6.286 16 C -0.159 4.159 17 C 0.031 3.969 18 C -0.027 4.027 19 C -0.196 4.196 20 C -0.192 4.192 21 C -0.093 4.093 22 C -0.144 4.144 23 O -0.327 6.327 24 Si 0.597 3.403 25 O -0.059 6.059 26 C -0.134 4.134 27 C -0.083 4.083 28 C -0.162 4.162 29 H 0.083 0.917 30 H 0.121 0.879 31 H 0.083 0.917 32 H 0.106 0.894 33 H 0.118 0.882 34 H 0.236 0.764 35 H 0.259 0.741 36 H 0.162 0.838 37 H 0.174 0.826 38 H 0.173 0.827 39 H 0.156 0.844 40 H 0.229 0.771 41 H -0.172 1.172 42 H -0.179 1.179 43 H 0.157 0.843 44 H 0.154 0.846 45 H 0.132 0.868 46 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 0.404 0.353 3.084 3.130 hybrid contribution -0.749 -1.059 0.962 1.615 sum -0.345 -0.706 4.046 4.122 Atomic orbital electron populations 1.23327 0.75930 1.04020 1.02733 1.86519 1.23749 1.33357 1.83790 1.23564 0.91669 0.81435 0.72121 1.90690 1.66973 1.36414 1.45000 1.22663 0.87670 1.01050 1.01852 0.85761 1.23408 0.97841 1.01299 0.94563 1.21782 0.83389 0.96375 0.96618 0.86615 1.45591 1.07414 1.65084 1.18512 1.17969 0.82735 0.78489 0.85745 1.90862 1.85622 1.45065 1.17257 1.20437 0.94319 1.06806 0.95431 1.18276 0.90259 0.94243 0.83859 1.84774 1.93505 1.29424 1.20878 1.21599 0.99146 1.01139 0.94046 1.17763 0.89406 0.96833 0.92889 1.20321 0.83343 1.05746 0.93320 1.21912 0.98210 1.03403 0.96031 1.21588 0.93219 1.04769 0.99651 1.22949 0.93560 1.03346 0.89469 1.24362 0.88003 0.86753 1.15300 1.86670 1.70661 1.16916 1.58470 0.94482 0.80681 0.91184 0.74002 1.83949 1.16830 1.64423 1.40665 1.20705 0.90588 1.01258 1.00879 1.20807 0.98807 0.95771 0.92865 1.23371 0.97010 0.94802 1.01055 0.91736 0.87851 0.91715 0.89367 0.88222 0.76418 0.74142 0.83811 0.82602 0.82661 0.84401 0.77070 1.17167 1.17872 0.84317 0.84606 0.86846 0.89538 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.39 10.57 -39.25 -0.41 -0.81 16 3 C 0.47 0.59 7.48 36.01 0.27 0.86 16 4 O -0.50 -2.07 15.65 -18.75 -0.29 -2.36 16 5 C -0.11 0.21 4.14 -90.96 -0.38 -0.16 16 6 H 0.12 -0.50 8.14 -51.93 -0.42 -0.92 16 7 C -0.13 0.20 7.43 -25.92 -0.19 0.01 16 8 C 0.12 -0.17 4.32 -67.12 -0.29 -0.46 16 9 H 0.12 0.01 7.46 -51.93 -0.39 -0.37 16 10 N -0.71 1.32 5.21 -54.13 -0.28 1.03 16 11 C 0.56 0.72 7.75 -12.58 -0.10 0.62 16 12 O -0.51 -2.56 14.74 -16.71 -0.25 -2.80 16 13 C -0.17 -0.02 5.89 -104.79 -0.62 -0.64 16 14 C 0.18 0.20 6.71 -38.75 -0.26 -0.06 16 15 O -0.47 -0.90 11.56 -40.69 -0.47 -1.37 16 16 C -0.14 -0.05 9.65 -39.05 -0.38 -0.43 16 17 C 0.03 -0.01 5.87 -104.95 -0.62 -0.62 16 18 C 0.02 0.01 7.02 -36.54 -0.26 -0.25 16 19 C -0.18 0.08 10.26 -39.38 -0.40 -0.32 16 20 C -0.17 0.00 10.78 -39.82 -0.43 -0.43 16 21 C -0.04 -0.01 6.20 -35.51 -0.22 -0.23 16 22 C -0.03 0.03 2.98 36.01 0.11 0.14 16 23 O -0.52 -0.12 12.88 -35.23 -0.45 -0.58 16 24 Si 0.70 -0.78 32.11 -169.99 -5.46 -6.23 16 25 O -0.16 -0.16 8.79 4.73 0.04 -0.12 16 26 C -0.12 0.26 9.48 -39.60 -0.38 -0.12 16 27 C -0.06 0.16 9.47 -39.62 -0.38 -0.21 16 28 C -0.12 0.27 7.15 -25.92 -0.19 0.08 16 29 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 30 H 0.10 -0.31 8.14 -51.93 -0.42 -0.74 16 31 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 32 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.10 -0.12 8.09 -51.93 -0.42 -0.54 16 34 H 0.40 -1.87 6.71 -40.82 -0.27 -2.15 16 35 H 0.40 -0.78 9.06 45.56 0.41 -0.37 16 36 H 0.14 -0.02 7.90 -52.49 -0.41 -0.44 16 37 H 0.16 -0.44 7.24 -52.49 -0.38 -0.82 16 38 H 0.16 -0.18 8.06 -52.49 -0.42 -0.60 16 39 H 0.14 -0.35 7.96 -51.93 -0.41 -0.77 16 40 H 0.38 -0.90 8.70 45.56 0.40 -0.50 16 41 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 42 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 43 H 0.14 -0.62 6.95 -52.49 -0.37 -0.98 16 44 H 0.14 -0.79 6.38 -52.48 -0.33 -1.12 16 45 H 0.11 -0.11 7.43 -51.93 -0.39 -0.49 16 46 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 LS Contribution 399.65 15.07 6.02 6.02 Total: 0.00 -11.48 399.65 -9.91 -21.38 By element: Atomic # 1 Polarization: -8.26 SS G_CDS: -4.72 Total: -12.99 kcal Atomic # 6 Polarization: 2.45 SS G_CDS: -3.63 Total: -1.18 kcal Atomic # 7 Polarization: 1.32 SS G_CDS: -0.28 Total: 1.03 kcal Atomic # 8 Polarization: -6.20 SS G_CDS: -1.84 Total: -8.04 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.46 Total: -6.23 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -11.48 -9.91 -21.38 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_12807986.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.838 kcal (2) G-P(sol) polarization free energy of solvation -11.477 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.314 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.906 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.383 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.221 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds