Wall clock time and date at job start Sat Mar 6 2021 16:03:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34229 * 116.99906 * 2 1 4 4 O 1.20830 * 120.00029 * 359.97438 * 3 2 1 5 5 C 1.50698 * 119.99675 * 180.02562 * 3 2 1 6 6 H 1.08997 * 112.84959 * 311.19112 * 5 3 2 7 7 C 1.53784 * 113.61643 * 82.50153 * 5 3 2 8 8 C 1.53781 * 87.08365 * 139.97918 * 7 5 3 9 9 H 1.08993 * 113.61753 * 220.02006 * 8 7 5 10 10 N 1.46501 * 113.61248 * 89.11256 * 8 7 5 11 11 C 1.34781 * 120.00081 * 107.50469 * 10 8 7 12 12 O 1.21581 * 119.99455 * 0.02562 * 11 10 8 13 13 C 1.47653 * 120.00188 * 179.97438 * 11 10 8 14 14 C 1.40007 * 120.45530 * 353.99113 * 13 11 10 15 15 N 1.31311 * 121.37647 * 179.97438 * 14 13 11 16 16 C 1.32822 * 121.89426 * 0.02562 * 15 14 13 17 17 N 1.37153 * 132.96844 * 180.02562 * 16 15 14 18 18 C 1.36943 * 110.11293 * 179.97438 * 17 16 15 19 19 C 1.34181 * 109.95655 * 359.97438 * 18 17 16 20 20 C 1.50699 * 126.60238 * 180.02562 * 19 18 17 21 21 O 1.42900 * 109.46807 * 104.97595 * 20 19 18 22 22 Si 1.86305 * 109.47108 * 344.98007 * 20 19 18 23 23 C 1.41022 * 120.07904 * 359.97438 * 16 15 14 24 24 C 1.39288 * 119.62070 * 359.73165 * 23 16 15 25 25 C 1.50699 * 121.03152 * 180.29662 * 24 23 16 26 26 C 1.53778 * 87.07895 * 334.56812 * 8 7 5 27 27 H 1.08998 * 109.47157 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.47176 * 300.00708 * 1 2 3 29 29 H 1.09006 * 109.46692 * 60.00164 * 1 2 3 30 30 H 1.09003 * 113.60681 * 254.52755 * 7 5 3 31 31 H 1.09001 * 113.61355 * 25.34374 * 7 5 3 32 32 H 0.96998 * 120.00063 * 287.50286 * 10 8 7 33 33 H 1.07995 * 119.31306 * 359.97030 * 14 13 11 34 34 H 0.96999 * 124.94236 * 359.94852 * 17 16 15 35 35 H 1.07999 * 125.02486 * 180.02562 * 18 17 16 36 36 H 1.08998 * 109.47196 * 224.97550 * 20 19 18 37 37 H 0.96701 * 114.00301 * 179.97438 * 21 20 19 38 38 H 1.48496 * 109.99647 * 298.67972 * 22 20 19 39 39 H 1.48507 * 109.99863 * 59.99848 * 22 20 19 40 40 H 1.08998 * 109.46679 * 263.91762 * 25 24 23 41 41 H 1.09000 * 109.47088 * 23.91887 * 25 24 23 42 42 H 1.09000 * 109.47186 * 143.92389 * 25 24 23 43 43 H 1.09004 * 113.61633 * 270.88337 * 26 8 7 44 44 H 1.09001 * 113.61950 * 139.98505 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5664 1.2748 -0.0006 6 1 4.0239 0.6362 0.7550 7 6 4.1906 1.1237 -1.3979 8 6 5.1808 2.2269 -0.9887 9 1 5.3955 2.9385 -1.7859 10 7 6.3903 1.7178 -0.3375 11 6 7.5664 1.7310 -0.9956 12 8 7.6236 2.1659 -2.1296 13 6 8.7856 1.2185 -0.3391 14 6 8.7585 0.8334 1.0067 15 7 9.8318 0.3747 1.6083 16 6 10.9932 0.2531 0.9755 17 7 12.2305 -0.1886 1.3691 18 6 13.1113 -0.1159 0.3230 19 6 12.4910 0.3650 -0.7653 20 6 13.1063 0.5975 -2.1212 21 8 12.6747 -0.4248 -3.0217 22 14 14.9632 0.5538 -1.9762 23 6 11.1003 0.6205 -0.3819 24 6 9.9810 1.1053 -1.0543 25 6 10.0579 1.5008 -2.5064 26 6 4.1079 2.7141 -0.0006 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8901 30 1 4.6609 0.1543 -1.5633 31 1 3.5221 1.4138 -2.2085 32 1 6.3447 1.3713 0.5673 33 1 7.8356 0.9153 1.5616 34 1 12.4499 -0.5059 2.2591 35 1 14.1512 -0.4039 0.3671 36 1 12.7941 1.5707 -2.4999 37 1 13.0325 -0.3381 -3.9158 38 1 15.4270 1.6325 -1.0672 39 1 15.4015 -0.7682 -1.4609 40 1 10.2199 2.5761 -2.5819 41 1 10.8849 0.9745 -2.9830 42 1 9.1247 1.2382 -3.0045 43 1 3.4172 3.4405 -0.4291 44 1 4.5112 3.0289 0.9618 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_12890568.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:03:25 Heat of formation + Delta-G solvation = -40.659532 kcal Electronic energy + Delta-G solvation = -29891.827989 eV Core-core repulsion = 25584.977801 eV Total energy + Delta-G solvation = -4306.850188 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.141 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.87453 -41.98665 -40.93159 -39.48006 -38.50893 -37.75467 -37.30196 -35.11517 -34.40805 -32.07741 -31.08108 -29.39586 -28.77712 -27.07685 -26.91507 -26.38388 -24.71532 -24.00844 -22.50224 -22.00104 -20.46806 -20.39652 -19.33133 -18.96266 -18.49670 -18.38796 -17.81209 -17.62269 -17.34048 -17.09165 -16.62267 -16.42206 -15.84931 -15.72332 -15.40433 -15.21104 -15.05842 -14.88135 -14.67362 -14.29097 -14.17302 -13.98489 -13.78303 -13.66663 -13.56163 -13.44464 -13.25027 -13.12904 -12.90989 -12.74496 -12.62627 -12.00141 -11.90184 -11.79949 -11.76654 -11.29815 -11.09208 -10.99567 -10.40841 -10.20114 -10.16848 -9.61836 -9.17411 -5.08571 -0.26053 -0.08063 1.17291 1.20796 1.30752 1.56458 1.60239 1.72056 1.87083 1.87822 1.98030 2.81418 3.16822 3.21897 3.28185 3.33843 3.50496 3.60703 3.64648 3.71912 3.73824 3.81039 3.97679 4.02989 4.09252 4.17214 4.24899 4.25863 4.41860 4.45997 4.56011 4.60820 4.63786 4.65649 4.71794 4.75700 4.80496 4.90628 4.94148 5.02926 5.17220 5.36039 5.40285 5.43827 5.54975 5.74392 6.06330 6.39841 6.63439 6.74820 6.82602 7.18744 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.504 6.504 5 C -0.114 4.114 6 H 0.125 0.875 7 C -0.132 4.132 8 C 0.125 3.875 9 H 0.117 0.883 10 N -0.713 5.713 11 C 0.577 3.423 12 O -0.525 6.525 13 C -0.235 4.235 14 C 0.181 3.819 15 N -0.503 5.503 16 C 0.310 3.690 17 N -0.569 5.569 18 C 0.064 3.936 19 C -0.132 4.132 20 C -0.041 4.041 21 O -0.544 6.544 22 Si 0.687 3.313 23 C -0.148 4.148 24 C 0.088 3.912 25 C -0.132 4.132 26 C -0.125 4.125 27 H 0.103 0.897 28 H 0.064 0.936 29 H 0.064 0.936 30 H 0.088 0.912 31 H 0.099 0.901 32 H 0.400 0.600 33 H 0.163 0.837 34 H 0.426 0.574 35 H 0.177 0.823 36 H 0.076 0.924 37 H 0.381 0.619 38 H -0.255 1.255 39 H -0.252 1.252 40 H 0.082 0.918 41 H 0.081 0.919 42 H 0.099 0.901 43 H 0.113 0.887 44 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.298 -1.392 -0.541 3.620 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.391 6.391 5 C -0.133 4.133 6 H 0.143 0.857 7 C -0.171 4.171 8 C 0.019 3.981 9 H 0.135 0.865 10 N -0.365 5.365 11 C 0.366 3.634 12 O -0.402 6.402 13 C -0.242 4.242 14 C 0.013 3.987 15 N -0.216 5.216 16 C 0.076 3.924 17 N -0.174 5.174 18 C -0.062 4.062 19 C -0.139 4.139 20 C -0.152 4.152 21 O -0.350 6.350 22 Si 0.587 3.413 23 C -0.155 4.155 24 C 0.080 3.920 25 C -0.187 4.187 26 C -0.163 4.163 27 H 0.121 0.879 28 H 0.082 0.918 29 H 0.083 0.917 30 H 0.106 0.894 31 H 0.117 0.883 32 H 0.236 0.764 33 H 0.180 0.820 34 H 0.265 0.735 35 H 0.194 0.806 36 H 0.094 0.906 37 H 0.229 0.771 38 H -0.179 1.179 39 H -0.176 1.176 40 H 0.101 0.899 41 H 0.099 0.901 42 H 0.117 0.883 43 H 0.131 0.869 44 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges 3.593 -1.396 0.701 3.919 hybrid contribution -0.730 -0.147 0.668 1.000 sum 2.864 -1.544 1.369 3.530 Atomic orbital electron populations 1.23323 0.75977 1.03991 1.02712 1.86524 1.23710 1.33381 1.83797 1.23576 0.91687 0.81414 0.72087 1.90689 1.66978 1.36422 1.45033 1.22671 0.87629 1.01095 1.01901 0.85703 1.23409 0.97854 1.01318 0.94519 1.21770 0.83344 0.96332 0.96628 0.86545 1.45571 1.07381 1.65072 1.18492 1.17836 0.82391 0.77799 0.85422 1.90766 1.85673 1.45940 1.17790 1.20388 0.94961 1.12613 0.96260 1.22515 0.94951 0.90784 0.90498 1.66441 0.97259 1.19027 1.38853 1.18469 0.86827 0.96978 0.90081 1.41467 1.06310 1.56104 1.13560 1.21627 0.95531 1.02304 0.86762 1.19538 0.91973 1.08133 0.94272 1.24034 1.09702 0.93511 0.87917 1.86541 1.74569 1.49886 1.24011 0.94928 0.75653 0.80758 0.89920 1.19455 0.94377 1.07704 0.93999 1.19903 0.88870 0.86885 0.96345 1.21253 1.05303 1.02100 0.90083 1.23377 0.97026 0.94782 1.01108 0.87878 0.91756 0.91731 0.89358 0.88257 0.76432 0.82004 0.73527 0.80578 0.90630 0.77095 1.17897 1.17592 0.89937 0.90056 0.88253 0.86869 0.89513 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.52 10.57 -39.26 -0.41 -0.93 16 3 C 0.47 0.76 7.48 36.00 0.27 1.03 16 4 O -0.50 -2.24 15.65 -18.75 -0.29 -2.53 16 5 C -0.11 0.17 4.14 -90.96 -0.38 -0.21 16 6 H 0.13 -0.43 8.14 -51.93 -0.42 -0.85 16 7 C -0.13 0.19 7.43 -25.92 -0.19 -0.01 16 8 C 0.12 -0.15 4.32 -67.12 -0.29 -0.44 16 9 H 0.12 0.02 7.46 -51.93 -0.39 -0.37 16 10 N -0.71 0.92 5.21 -54.02 -0.28 0.64 16 11 C 0.58 1.04 7.71 -12.41 -0.10 0.95 16 12 O -0.52 -2.40 13.11 5.29 0.07 -2.33 16 13 C -0.23 -0.48 5.89 -104.82 -0.62 -1.10 16 14 C 0.18 0.17 10.67 -17.11 -0.18 -0.01 16 15 N -0.50 -1.51 10.37 -11.96 -0.12 -1.63 16 16 C 0.31 1.01 8.42 -155.71 -1.31 -0.30 16 17 N -0.57 -0.47 6.04 -12.12 -0.07 -0.54 16 18 C 0.06 0.04 10.44 -16.70 -0.17 -0.13 16 19 C -0.13 -0.27 5.61 -102.73 -0.58 -0.84 16 20 C -0.04 0.02 1.87 36.01 0.07 0.09 16 21 O -0.54 0.22 11.62 -35.23 -0.41 -0.19 16 22 Si 0.69 -1.58 30.80 -169.99 -5.24 -6.81 16 23 C -0.15 -0.52 6.16 -105.12 -0.65 -1.17 16 24 C 0.09 0.28 5.98 -103.67 -0.62 -0.34 16 25 C -0.13 -0.30 8.45 36.01 0.30 0.01 16 26 C -0.12 0.22 7.15 -25.92 -0.19 0.03 16 27 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 28 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 29 H 0.06 -0.02 8.13 -51.93 -0.42 -0.45 16 30 H 0.09 -0.11 8.14 -51.93 -0.42 -0.54 16 31 H 0.10 -0.12 8.09 -51.93 -0.42 -0.54 16 32 H 0.40 -1.54 6.78 -40.82 -0.28 -1.81 16 33 H 0.16 -0.48 6.43 -52.49 -0.34 -0.82 16 34 H 0.43 -0.82 8.96 -40.82 -0.37 -1.19 16 35 H 0.18 -0.30 6.31 -52.49 -0.33 -0.63 16 36 H 0.08 -0.12 7.15 -51.93 -0.37 -0.49 16 37 H 0.38 -2.06 8.74 45.56 0.40 -1.66 16 38 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 39 H -0.25 -0.03 7.04 56.52 0.40 0.37 16 40 H 0.08 0.16 8.14 -51.93 -0.42 -0.26 16 41 H 0.08 0.12 4.79 -51.93 -0.25 -0.13 16 42 H 0.10 0.35 5.97 -51.93 -0.31 0.04 16 43 H 0.11 -0.07 7.43 -51.93 -0.39 -0.45 16 44 H 0.09 -0.24 8.14 -51.93 -0.42 -0.67 16 LS Contribution 364.89 15.07 5.50 5.50 Total: 0.00 -11.46 364.89 -10.02 -21.48 By element: Atomic # 1 Polarization: -6.08 SS G_CDS: -5.20 Total: -11.27 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: -3.56 Total: -1.38 kcal Atomic # 7 Polarization: -1.05 SS G_CDS: -0.48 Total: -1.53 kcal Atomic # 8 Polarization: -4.93 SS G_CDS: -1.05 Total: -5.98 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -5.24 Total: -6.81 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -11.46 -10.02 -21.48 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_12890568.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.176 kcal (2) G-P(sol) polarization free energy of solvation -11.461 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.638 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.022 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.483 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.660 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds