Wall clock time and date at job start Sat Mar 6 2021 16:03:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34229 * 116.99906 * 2 1 4 4 O 1.20830 * 120.00029 * 359.97438 * 3 2 1 5 5 C 1.50698 * 119.99675 * 180.02562 * 3 2 1 6 6 H 1.08997 * 112.84959 * 311.19112 * 5 3 2 7 7 C 1.53784 * 113.61643 * 82.50153 * 5 3 2 8 8 C 1.53781 * 87.08365 * 139.97918 * 7 5 3 9 9 H 1.08993 * 113.61753 * 220.02006 * 8 7 5 10 10 N 1.46501 * 113.61248 * 89.11256 * 8 7 5 11 11 C 1.34781 * 120.00081 * 107.50469 * 10 8 7 12 12 O 1.21581 * 119.99455 * 0.02562 * 11 10 8 13 13 C 1.47653 * 120.00188 * 179.97438 * 11 10 8 14 14 C 1.40007 * 120.45530 * 353.99113 * 13 11 10 15 15 N 1.31311 * 121.37647 * 179.97438 * 14 13 11 16 16 C 1.32822 * 121.89426 * 0.02562 * 15 14 13 17 17 N 1.37153 * 132.96844 * 180.02562 * 16 15 14 18 18 C 1.36943 * 110.11293 * 179.97438 * 17 16 15 19 19 C 1.34181 * 109.95655 * 359.97438 * 18 17 16 20 20 C 1.50699 * 126.60238 * 180.02562 * 19 18 17 21 21 O 1.42900 * 109.46807 * 104.97595 * 20 19 18 22 22 Si 1.86305 * 109.47108 * 344.98007 * 20 19 18 23 23 C 1.41022 * 120.07904 * 359.97438 * 16 15 14 24 24 C 1.39288 * 119.62070 * 359.73165 * 23 16 15 25 25 C 1.50699 * 121.03152 * 180.29662 * 24 23 16 26 26 C 1.53778 * 87.07895 * 334.56812 * 8 7 5 27 27 H 1.08998 * 109.47157 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.47176 * 300.00708 * 1 2 3 29 29 H 1.09006 * 109.46692 * 60.00164 * 1 2 3 30 30 H 1.09003 * 113.60681 * 254.52755 * 7 5 3 31 31 H 1.09001 * 113.61355 * 25.34374 * 7 5 3 32 32 H 0.96998 * 120.00063 * 287.50286 * 10 8 7 33 33 H 1.07995 * 119.31306 * 359.97030 * 14 13 11 34 34 H 0.96999 * 124.94236 * 359.94852 * 17 16 15 35 35 H 1.07999 * 125.02486 * 180.02562 * 18 17 16 36 36 H 1.08998 * 109.47196 * 224.97550 * 20 19 18 37 37 H 0.96701 * 114.00301 * 179.97438 * 21 20 19 38 38 H 1.48496 * 109.99647 * 298.67972 * 22 20 19 39 39 H 1.48507 * 109.99863 * 59.99848 * 22 20 19 40 40 H 1.08998 * 109.46679 * 263.91762 * 25 24 23 41 41 H 1.09000 * 109.47088 * 23.91887 * 25 24 23 42 42 H 1.09000 * 109.47186 * 143.92389 * 25 24 23 43 43 H 1.09004 * 113.61633 * 270.88337 * 26 8 7 44 44 H 1.09001 * 113.61950 * 139.98505 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5664 1.2748 -0.0006 6 1 4.0239 0.6362 0.7550 7 6 4.1906 1.1237 -1.3979 8 6 5.1808 2.2269 -0.9887 9 1 5.3955 2.9385 -1.7859 10 7 6.3903 1.7178 -0.3375 11 6 7.5664 1.7310 -0.9956 12 8 7.6236 2.1659 -2.1296 13 6 8.7856 1.2185 -0.3391 14 6 8.7585 0.8334 1.0067 15 7 9.8318 0.3747 1.6083 16 6 10.9932 0.2531 0.9755 17 7 12.2305 -0.1886 1.3691 18 6 13.1113 -0.1159 0.3230 19 6 12.4910 0.3650 -0.7653 20 6 13.1063 0.5975 -2.1212 21 8 12.6747 -0.4248 -3.0217 22 14 14.9632 0.5538 -1.9762 23 6 11.1003 0.6205 -0.3819 24 6 9.9810 1.1053 -1.0543 25 6 10.0579 1.5008 -2.5064 26 6 4.1079 2.7141 -0.0006 27 1 -0.3633 -1.0276 0.0005 28 1 -0.3633 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8901 30 1 4.6609 0.1543 -1.5633 31 1 3.5221 1.4138 -2.2085 32 1 6.3447 1.3713 0.5673 33 1 7.8356 0.9153 1.5616 34 1 12.4499 -0.5059 2.2591 35 1 14.1512 -0.4039 0.3671 36 1 12.7941 1.5707 -2.4999 37 1 13.0325 -0.3381 -3.9158 38 1 15.4270 1.6325 -1.0672 39 1 15.4015 -0.7682 -1.4609 40 1 10.2199 2.5761 -2.5819 41 1 10.8849 0.9745 -2.9830 42 1 9.1247 1.2382 -3.0045 43 1 3.4172 3.4405 -0.4291 44 1 4.5112 3.0289 0.9618 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12121848_12890568.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:03:23 Heat of formation + Delta-G solvation = -42.894129 kcal Electronic energy + Delta-G solvation = -29891.924888 eV Core-core repulsion = 25584.977801 eV Total energy + Delta-G solvation = -4306.947087 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.141 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -42.94985 -42.03436 -41.03727 -39.50508 -38.59494 -37.69353 -37.44214 -35.20386 -34.48987 -32.12693 -31.15185 -29.40723 -28.88960 -27.05860 -26.81881 -26.36664 -24.79490 -24.09238 -22.56056 -22.07769 -20.47141 -20.42749 -19.40386 -19.02295 -18.56428 -18.30258 -17.87988 -17.63296 -17.41910 -17.14550 -16.66614 -16.51555 -15.88417 -15.78542 -15.36034 -15.16855 -15.09651 -14.87596 -14.70630 -14.34051 -14.20993 -14.09196 -13.79269 -13.75187 -13.59232 -13.45024 -13.32665 -13.12558 -12.98854 -12.79371 -12.58482 -11.96567 -11.86774 -11.80924 -11.73760 -11.36916 -11.22104 -11.13089 -10.51145 -10.20015 -10.14978 -9.71114 -9.25213 -4.90502 -0.40799 -0.16184 1.07265 1.25602 1.35015 1.53926 1.71950 1.74033 1.76441 1.95713 2.00098 2.69556 3.22277 3.24965 3.33768 3.35880 3.48185 3.62067 3.64319 3.71469 3.78727 3.86070 4.02962 4.07133 4.08037 4.25153 4.25795 4.28151 4.43139 4.51597 4.57037 4.65203 4.66540 4.68690 4.72949 4.75867 4.82468 4.91389 4.95641 5.00251 5.11744 5.24230 5.34114 5.35477 5.51616 5.63532 6.08290 6.43326 6.65733 6.73919 6.98739 7.13441 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.468 3.532 4 O -0.538 6.538 5 C -0.107 4.107 6 H 0.152 0.848 7 C -0.129 4.129 8 C 0.127 3.873 9 H 0.101 0.899 10 N -0.696 5.696 11 C 0.578 3.422 12 O -0.558 6.558 13 C -0.240 4.240 14 C 0.185 3.815 15 N -0.517 5.517 16 C 0.289 3.711 17 N -0.562 5.562 18 C 0.064 3.936 19 C -0.156 4.156 20 C -0.055 4.055 21 O -0.563 6.563 22 Si 0.784 3.216 23 C -0.170 4.170 24 C 0.069 3.931 25 C -0.123 4.123 26 C -0.117 4.117 27 H 0.127 0.873 28 H 0.061 0.939 29 H 0.060 0.940 30 H 0.091 0.909 31 H 0.094 0.906 32 H 0.415 0.585 33 H 0.200 0.800 34 H 0.437 0.563 35 H 0.198 0.802 36 H 0.082 0.918 37 H 0.401 0.599 38 H -0.289 1.289 39 H -0.281 1.281 40 H 0.081 0.919 41 H 0.087 0.913 42 H 0.085 0.915 43 H 0.100 0.900 44 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.731 -2.037 0.134 4.253 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.312 3.688 4 O -0.428 6.428 5 C -0.126 4.126 6 H 0.170 0.830 7 C -0.167 4.167 8 C 0.021 3.979 9 H 0.119 0.881 10 N -0.348 5.348 11 C 0.366 3.634 12 O -0.437 6.437 13 C -0.248 4.248 14 C 0.016 3.984 15 N -0.231 5.231 16 C 0.056 3.944 17 N -0.169 5.169 18 C -0.062 4.062 19 C -0.164 4.164 20 C -0.164 4.164 21 O -0.373 6.373 22 Si 0.687 3.313 23 C -0.177 4.177 24 C 0.061 3.939 25 C -0.178 4.178 26 C -0.155 4.155 27 H 0.145 0.855 28 H 0.080 0.920 29 H 0.079 0.921 30 H 0.109 0.891 31 H 0.112 0.888 32 H 0.253 0.747 33 H 0.217 0.783 34 H 0.278 0.722 35 H 0.215 0.785 36 H 0.099 0.901 37 H 0.252 0.748 38 H -0.216 1.216 39 H -0.208 1.208 40 H 0.099 0.901 41 H 0.106 0.894 42 H 0.104 0.896 43 H 0.119 0.881 44 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges 4.004 -2.065 1.384 4.713 hybrid contribution -0.922 0.032 0.464 1.033 sum 3.082 -2.033 1.848 4.128 Atomic orbital electron populations 1.23516 0.75181 1.05532 1.02419 1.86526 1.24673 1.33330 1.83503 1.24159 0.92741 0.80939 0.70914 1.90674 1.67950 1.37429 1.46739 1.22822 0.85667 1.01701 1.02426 0.83005 1.23372 0.97544 1.01239 0.94591 1.21693 0.83319 0.96281 0.96620 0.88056 1.45395 1.06412 1.64093 1.18909 1.17854 0.83000 0.77466 0.85050 1.90754 1.86179 1.47567 1.19231 1.20498 0.94735 1.12704 0.96827 1.23093 0.95731 0.89366 0.90224 1.66533 0.97610 1.19742 1.39195 1.18767 0.87594 0.97615 0.90427 1.41517 1.05663 1.55530 1.14184 1.22008 0.96286 1.01518 0.86418 1.20005 0.91776 1.08711 0.95867 1.24334 1.11312 0.93709 0.87028 1.86486 1.75267 1.50036 1.25492 0.93787 0.72351 0.77042 0.88081 1.19738 0.95230 1.08262 0.94490 1.20128 0.89556 0.87458 0.96769 1.21143 1.04728 1.02016 0.89945 1.23302 0.96215 0.94474 1.01552 0.85472 0.91986 0.92145 0.89070 0.88758 0.74654 0.78320 0.72218 0.78536 0.90051 0.74773 1.21571 1.20778 0.90091 0.89426 0.89643 0.88148 0.87816 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 113.37 1.20 1.17 16 2 O -0.36 -0.96 10.57 -51.41 -0.54 -1.51 16 3 C 0.47 1.51 7.48 71.24 0.53 2.04 16 4 O -0.54 -5.17 15.65 21.95 0.34 -4.83 16 5 C -0.11 0.41 4.14 -11.01 -0.05 0.36 16 6 H 0.15 -1.40 8.14 -2.39 -0.02 -1.42 16 7 C -0.13 0.38 7.43 31.12 0.23 0.61 16 8 C 0.13 -0.31 4.32 45.52 0.20 -0.11 16 9 H 0.10 0.13 7.46 -2.39 -0.02 0.11 16 10 N -0.70 2.29 5.21 -443.09 -2.31 -0.02 16 11 C 0.58 2.31 7.71 86.73 0.67 2.98 16 12 O -0.56 -5.84 13.11 -3.97 -0.05 -5.90 16 13 C -0.24 -1.10 5.89 -20.00 -0.12 -1.21 16 14 C 0.18 0.26 10.67 85.20 0.91 1.17 16 15 N -0.52 -3.08 10.37 -191.75 -1.99 -5.07 16 16 C 0.29 2.04 8.42 134.02 1.13 3.17 16 17 N -0.56 -1.09 6.04 -192.25 -1.16 -2.25 16 18 C 0.06 0.10 10.44 82.97 0.87 0.97 16 19 C -0.16 -0.73 5.61 -18.64 -0.10 -0.83 16 20 C -0.05 0.05 1.87 71.24 0.13 0.18 16 21 O -0.56 0.40 11.62 -148.98 -1.73 -1.33 16 22 Si 0.78 -3.91 30.80 68.60 2.11 -1.79 16 23 C -0.17 -1.36 6.16 -20.19 -0.12 -1.48 16 24 C 0.07 0.53 5.98 -19.24 -0.12 0.41 16 25 C -0.12 -0.75 8.45 71.24 0.60 -0.15 16 26 C -0.12 0.47 7.15 31.12 0.22 0.69 16 27 H 0.13 -0.80 8.14 -2.39 -0.02 -0.82 16 28 H 0.06 -0.03 8.13 -2.39 -0.02 -0.05 16 29 H 0.06 -0.01 8.13 -2.38 -0.02 -0.03 16 30 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 31 H 0.09 -0.16 8.09 -2.39 -0.02 -0.18 16 32 H 0.41 -3.97 6.78 -92.71 -0.63 -4.59 16 33 H 0.20 -1.57 6.43 -2.91 -0.02 -1.59 16 34 H 0.44 -1.65 8.96 -92.71 -0.83 -2.48 16 35 H 0.20 -0.72 6.31 -2.91 -0.02 -0.74 16 36 H 0.08 -0.23 7.15 -2.39 -0.02 -0.24 16 37 H 0.40 -4.47 8.74 -74.06 -0.65 -5.11 16 38 H -0.29 -0.18 7.11 99.48 0.71 0.52 16 39 H -0.28 0.04 7.04 99.48 0.70 0.74 16 40 H 0.08 0.46 8.14 -2.39 -0.02 0.44 16 41 H 0.09 0.36 4.79 -2.39 -0.01 0.35 16 42 H 0.09 0.77 5.97 -2.39 -0.01 0.75 16 43 H 0.10 -0.07 7.43 -2.39 -0.02 -0.08 16 44 H 0.10 -0.75 8.14 -2.39 -0.02 -0.77 16 Total: 0.00 -28.10 364.89 -0.12 -28.22 By element: Atomic # 1 Polarization: -14.54 SS G_CDS: -0.97 Total: -15.51 kcal Atomic # 6 Polarization: 3.80 SS G_CDS: 6.18 Total: 9.98 kcal Atomic # 7 Polarization: -1.88 SS G_CDS: -5.46 Total: -7.34 kcal Atomic # 8 Polarization: -11.57 SS G_CDS: -1.98 Total: -13.56 kcal Atomic # 14 Polarization: -3.91 SS G_CDS: 2.11 Total: -1.79 kcal Total: -28.10 -0.12 -28.22 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_12890568.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.679 kcal (2) G-P(sol) polarization free energy of solvation -28.097 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.776 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.118 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.215 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.894 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds