Wall clock time and date at job start Sat Mar 6 2021 16:03:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34227 * 117.00261 * 2 1 4 4 O 1.20827 * 119.99686 * 0.02562 * 3 2 1 5 5 C 1.50696 * 120.00200 * 180.02562 * 3 2 1 6 6 H 1.09007 * 112.85111 * 311.19619 * 5 3 2 7 7 C 1.53777 * 113.69389 * 82.46880 * 5 3 2 8 8 C 1.53781 * 87.08247 * 139.99134 * 7 5 3 9 9 H 1.09000 * 113.68638 * 220.00665 * 8 7 5 10 10 N 1.46494 * 113.61424 * 89.11737 * 8 7 5 11 11 C 1.34777 * 120.00353 * 107.50086 * 10 8 7 12 12 O 1.21575 * 119.99440 * 0.02562 * 11 10 8 13 13 C 1.47717 * 120.00549 * 179.97438 * 11 10 8 14 14 C 1.39702 * 120.02750 * 180.02562 * 13 11 10 15 15 C 1.37661 * 119.97995 * 180.02562 * 14 13 11 16 16 C 1.39505 * 120.02041 * 0.02562 * 15 14 13 17 17 C 1.48286 * 119.97552 * 179.97438 * 16 15 14 18 18 C 1.39406 * 120.12467 * 179.97438 * 17 16 15 19 19 C 1.38002 * 119.86595 * 179.97438 * 18 17 16 20 20 C 1.38332 * 120.13103 * 0.02562 * 19 18 17 21 21 C 1.50697 * 119.87257 * 179.97438 * 20 19 18 22 22 O 1.42895 * 109.47590 * 300.00297 * 21 20 19 23 23 Si 1.86300 * 109.47007 * 179.97438 * 21 20 19 24 24 C 1.38332 * 120.25434 * 0.23400 * 20 19 18 25 25 C 1.38003 * 120.12712 * 359.48349 * 24 20 19 26 26 C 1.39499 * 120.05150 * 0.23157 * 16 15 14 27 27 C 1.37667 * 120.02186 * 359.48711 * 26 16 15 28 28 C 1.53785 * 113.61158 * 180.02562 * 5 3 2 29 29 H 1.08999 * 109.47367 * 59.99628 * 1 2 3 30 30 H 1.09000 * 109.46789 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47099 * 299.99581 * 1 2 3 32 32 H 1.08998 * 113.60930 * 25.44189 * 7 5 3 33 33 H 1.09002 * 113.61364 * 254.54264 * 7 5 3 34 34 H 0.96998 * 120.00300 * 287.50355 * 10 8 7 35 35 H 1.08005 * 120.01338 * 0.03716 * 14 13 11 36 36 H 1.07996 * 119.99410 * 179.97438 * 15 14 13 37 37 H 1.07997 * 120.06734 * 359.95724 * 18 17 16 38 38 H 1.08005 * 119.93368 * 180.02562 * 19 18 17 39 39 H 1.09001 * 109.46613 * 60.00435 * 21 20 19 40 40 H 0.96695 * 114.00385 * 180.02562 * 22 21 20 41 41 H 1.48506 * 110.00048 * 60.00676 * 23 21 20 42 42 H 1.48502 * 109.99996 * 181.32001 * 23 21 20 43 43 H 1.08003 * 119.94026 * 179.72298 * 24 20 19 44 44 H 1.08009 * 120.06511 * 180.25494 * 25 24 20 45 45 H 1.08003 * 119.99296 * 179.74510 * 26 16 15 46 46 H 1.08000 * 120.01483 * 180.27200 * 27 26 16 47 47 H 1.08998 * 113.61570 * 105.38758 * 28 5 3 48 48 H 1.08999 * 113.69243 * 334.49023 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2748 -0.0006 6 1 4.0240 0.6361 0.7550 7 6 4.1925 1.1231 -1.3969 8 6 5.1821 2.2265 -0.9867 9 1 5.3989 2.9383 -1.7832 10 7 6.3907 1.7178 -0.3338 11 6 7.5677 1.7307 -0.9903 12 8 7.6264 2.1651 -2.1243 13 6 8.7866 1.2183 -0.3317 14 6 10.0069 1.2320 -1.0116 15 6 11.1421 0.7537 -0.3971 16 6 11.0741 0.2549 0.9040 17 6 12.2974 -0.2606 1.5647 18 6 12.2331 -0.7593 2.8650 19 6 13.3747 -1.2382 3.4746 20 6 14.5814 -1.2236 2.7983 21 6 15.8246 -1.7475 3.4698 22 8 16.0815 -0.9902 4.6540 23 14 17.2712 -1.5920 2.3063 24 6 14.6522 -0.7250 1.5099 25 6 13.5160 -0.2488 0.8880 26 6 9.8551 0.2357 1.5819 27 6 8.7197 0.7189 0.9714 28 6 4.1077 2.7142 0.0001 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 3.5256 1.4143 -2.2084 33 1 4.6630 0.1537 -1.5614 34 1 6.3440 1.3715 0.5711 35 1 10.0598 1.6179 -2.0189 36 1 12.0856 0.7638 -0.9226 37 1 11.2917 -0.7705 3.3942 38 1 13.3261 -1.6252 4.4818 39 1 15.6812 -2.7956 3.7326 40 1 16.8693 -1.2728 5.1384 41 1 17.4774 -0.1677 1.9397 42 1 18.4973 -2.1345 2.9449 43 1 15.5978 -0.7119 0.9882 44 1 13.5717 0.1364 -0.1195 45 1 9.8027 -0.1545 2.5876 46 1 7.7768 0.7080 1.4980 47 1 4.5099 3.0290 0.9631 48 1 3.4186 3.4415 -0.4290 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12121848_13158362.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:03:27 Heat of formation + Delta-G solvation = -61.813717 kcal Electronic energy + Delta-G solvation = -30845.178033 eV Core-core repulsion = 26411.810072 eV Total energy + Delta-G solvation = -4433.367961 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.150 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -42.09801 -41.35561 -40.72016 -39.64560 -38.81824 -37.64955 -37.44849 -34.75458 -33.87138 -32.52958 -31.55506 -30.90414 -29.38942 -27.39483 -26.85583 -26.58878 -24.62899 -24.46636 -22.78400 -22.47822 -22.24913 -21.32775 -20.46466 -19.32684 -18.76267 -18.56159 -18.09844 -17.77664 -17.43188 -17.23536 -16.89625 -16.61974 -16.17385 -16.11086 -15.66446 -15.37989 -15.35483 -15.12189 -14.91081 -14.89151 -14.58908 -14.37805 -14.24680 -14.06016 -13.96368 -13.73526 -13.70741 -13.47943 -13.22203 -13.13644 -12.88638 -12.85875 -12.51218 -12.10306 -11.90409 -11.87028 -11.83229 -11.76774 -11.61288 -11.39222 -11.13725 -10.78400 -10.44756 -10.20231 -10.02932 -9.93472 -9.04436 -4.93885 -0.66880 0.38367 0.42323 0.51485 1.06161 1.29243 1.58684 1.72020 1.78324 1.94014 1.96944 2.59952 3.00901 3.21824 3.31370 3.36515 3.46535 3.63376 3.65655 3.74355 3.76066 3.86421 3.90753 4.03291 4.05552 4.06864 4.25921 4.27985 4.28481 4.31737 4.38060 4.46005 4.47989 4.62320 4.66524 4.67062 4.69160 4.73547 4.79539 4.88135 4.91557 4.94585 4.98070 5.10768 5.15974 5.23304 5.28991 5.34205 5.44000 5.45736 5.52327 5.67676 5.82572 5.94622 6.42897 6.57272 6.64851 7.11226 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.468 3.532 4 O -0.538 6.538 5 C -0.104 4.104 6 H 0.155 0.845 7 C -0.128 4.128 8 C 0.121 3.879 9 H 0.096 0.904 10 N -0.694 5.694 11 C 0.562 3.438 12 O -0.577 6.577 13 C -0.151 4.151 14 C -0.069 4.069 15 C -0.124 4.124 16 C -0.022 4.022 17 C -0.061 4.061 18 C -0.107 4.107 19 C -0.103 4.103 20 C -0.082 4.082 21 C -0.085 4.085 22 O -0.558 6.558 23 Si 0.758 3.242 24 C -0.123 4.123 25 C -0.107 4.107 26 C -0.121 4.121 27 C -0.072 4.072 28 C -0.117 4.117 29 H 0.059 0.941 30 H 0.128 0.872 31 H 0.062 0.938 32 H 0.093 0.907 33 H 0.092 0.908 34 H 0.417 0.583 35 H 0.128 0.872 36 H 0.147 0.853 37 H 0.149 0.851 38 H 0.133 0.867 39 H 0.098 0.902 40 H 0.395 0.605 41 H -0.301 1.301 42 H -0.287 1.287 43 H 0.141 0.859 44 H 0.148 0.852 45 H 0.156 0.844 46 H 0.161 0.839 47 H 0.103 0.897 48 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.758 -6.577 3.689 7.579 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.279 6.279 3 C 0.312 3.688 4 O -0.428 6.428 5 C -0.123 4.123 6 H 0.172 0.828 7 C -0.167 4.167 8 C 0.015 3.985 9 H 0.114 0.886 10 N -0.346 5.346 11 C 0.351 3.649 12 O -0.458 6.458 13 C -0.155 4.155 14 C -0.088 4.088 15 C -0.141 4.141 16 C -0.022 4.022 17 C -0.061 4.061 18 C -0.125 4.125 19 C -0.121 4.121 20 C -0.083 4.083 21 C -0.194 4.194 22 O -0.368 6.368 23 Si 0.664 3.336 24 C -0.140 4.140 25 C -0.124 4.124 26 C -0.138 4.138 27 C -0.090 4.090 28 C -0.155 4.155 29 H 0.078 0.922 30 H 0.146 0.854 31 H 0.080 0.920 32 H 0.111 0.889 33 H 0.111 0.889 34 H 0.256 0.744 35 H 0.146 0.854 36 H 0.165 0.835 37 H 0.167 0.833 38 H 0.151 0.849 39 H 0.115 0.885 40 H 0.245 0.755 41 H -0.229 1.229 42 H -0.214 1.214 43 H 0.159 0.841 44 H 0.165 0.835 45 H 0.174 0.826 46 H 0.179 0.821 47 H 0.122 0.878 48 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 0.784 -5.351 2.575 5.990 hybrid contribution 0.002 0.296 1.405 1.436 sum 0.786 -5.055 3.980 6.481 Atomic orbital electron populations 1.23520 0.75143 1.05582 1.02408 1.86520 1.24687 1.33235 1.83480 1.24135 0.92707 0.80976 0.70943 1.90676 1.67947 1.37469 1.46717 1.22790 0.85717 1.01493 1.02310 0.82792 1.23361 0.97444 1.01163 0.94731 1.21731 0.83639 0.96428 0.96657 0.88616 1.45427 1.06439 1.63732 1.19012 1.18530 0.83940 0.77290 0.85130 1.90788 1.86591 1.48300 1.20079 1.19943 0.93301 1.05742 0.96468 1.21259 0.91486 0.96045 1.00040 1.21381 0.99161 0.99016 0.94571 1.19142 0.92976 0.96382 0.93689 1.18950 0.92649 0.99964 0.94585 1.21532 0.99480 0.97415 0.94042 1.21113 0.91774 0.99087 1.00129 1.19620 0.94542 0.99607 0.94481 1.24986 1.03385 0.97882 0.93121 1.86537 1.50813 1.61290 1.38159 0.94213 0.74271 0.80668 0.84446 1.21094 0.99202 0.98966 0.94765 1.21463 0.91361 0.98738 1.00888 1.21475 0.91096 0.99935 1.01326 1.21486 1.00048 0.94990 0.92523 1.23299 0.96137 0.94640 1.01466 0.92221 0.85381 0.91953 0.88860 0.88894 0.74359 0.85363 0.83541 0.83320 0.84903 0.88461 0.75458 1.22878 1.21445 0.84136 0.83481 0.82640 0.82144 0.87805 0.88243 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.36 -0.69 10.56 -51.39 -0.54 -1.23 16 3 C 0.47 1.26 7.49 71.23 0.53 1.80 16 4 O -0.54 -4.99 15.65 21.96 0.34 -4.65 16 5 C -0.10 0.45 4.13 -11.01 -0.05 0.41 16 6 H 0.15 -1.58 8.14 -2.38 -0.02 -1.60 16 7 C -0.13 0.38 7.43 31.12 0.23 0.61 16 8 C 0.12 -0.23 4.33 45.53 0.20 -0.04 16 9 H 0.10 0.26 7.46 -2.39 -0.02 0.24 16 10 N -0.69 2.37 5.21 -442.97 -2.31 0.06 16 11 C 0.56 2.17 7.77 86.75 0.67 2.84 16 12 O -0.58 -7.41 15.93 -3.95 -0.06 -7.47 16 13 C -0.15 -0.15 5.88 -20.06 -0.12 -0.27 16 14 C -0.07 -0.18 9.58 22.49 0.22 0.04 16 15 C -0.12 0.01 9.41 22.44 0.21 0.22 16 16 C -0.02 0.02 5.88 -19.99 -0.12 -0.10 16 17 C -0.06 0.01 5.88 -20.04 -0.12 -0.11 16 18 C -0.11 0.13 9.43 22.50 0.21 0.34 16 19 C -0.10 -0.05 9.59 22.24 0.21 0.16 16 20 C -0.08 -0.08 5.43 -19.82 -0.11 -0.19 16 21 C -0.08 0.13 2.81 71.23 0.20 0.33 16 22 O -0.56 -0.72 12.74 -148.98 -1.90 -2.62 16 23 Si 0.76 -1.80 29.78 68.60 2.04 0.24 16 24 C -0.12 0.02 8.65 22.24 0.19 0.22 16 25 C -0.11 0.07 9.43 22.49 0.21 0.28 16 26 C -0.12 0.50 9.41 22.44 0.21 0.71 16 27 C -0.07 0.36 9.52 22.49 0.21 0.57 16 28 C -0.12 0.46 7.15 31.13 0.22 0.69 16 29 H 0.06 -0.04 8.13 -2.39 -0.02 -0.05 16 30 H 0.13 -0.90 8.14 -2.39 -0.02 -0.92 16 31 H 0.06 -0.07 8.13 -2.39 -0.02 -0.09 16 32 H 0.09 -0.14 8.10 -2.39 -0.02 -0.16 16 33 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 34 H 0.42 -4.32 6.72 -92.71 -0.62 -4.95 16 35 H 0.13 0.54 7.64 -2.91 -0.02 0.51 16 36 H 0.15 -0.54 6.19 -2.91 -0.02 -0.56 16 37 H 0.15 -0.93 6.19 -2.91 -0.02 -0.95 16 38 H 0.13 -0.17 8.06 -2.91 -0.02 -0.19 16 39 H 0.10 -0.54 7.96 -2.39 -0.02 -0.56 16 40 H 0.39 -2.58 8.74 -74.06 -0.65 -3.23 16 41 H -0.30 -1.59 7.11 99.48 0.71 -0.88 16 42 H -0.29 -0.54 7.11 99.48 0.71 0.17 16 43 H 0.14 -0.50 4.86 -2.91 -0.01 -0.52 16 44 H 0.15 -0.69 6.19 -2.91 -0.02 -0.71 16 45 H 0.16 -1.41 6.19 -2.91 -0.02 -1.43 16 46 H 0.16 -2.00 6.39 -2.91 -0.02 -2.02 16 47 H 0.10 -0.76 8.14 -2.39 -0.02 -0.78 16 48 H 0.10 -0.04 7.44 -2.39 -0.02 -0.06 16 Total: 0.00 -26.88 400.79 1.81 -25.07 By element: Atomic # 1 Polarization: -18.89 SS G_CDS: -0.20 Total: -19.08 kcal Atomic # 6 Polarization: 5.25 SS G_CDS: 4.43 Total: 9.68 kcal Atomic # 7 Polarization: 2.37 SS G_CDS: -2.31 Total: 0.06 kcal Atomic # 8 Polarization: -13.81 SS G_CDS: -2.16 Total: -15.97 kcal Atomic # 14 Polarization: -1.80 SS G_CDS: 2.04 Total: 0.24 kcal Total: -26.88 1.81 -25.07 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_13158362.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.744 kcal (2) G-P(sol) polarization free energy of solvation -26.877 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.620 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.806 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.070 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.814 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.54 seconds