Wall clock time and date at job start Sat Mar 6 2021 16:03:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34236 * 117.00149 * 2 1 4 4 O 1.20826 * 119.99483 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00525 * 179.97438 * 3 2 1 6 6 H 1.09005 * 112.84544 * 311.19541 * 5 3 2 7 7 C 1.54052 * 113.62077 * 82.50118 * 5 3 2 8 8 C 1.53778 * 86.98249 * 139.98192 * 7 5 3 9 9 H 1.09004 * 113.61175 * 219.98064 * 8 7 5 10 10 N 1.46500 * 113.61569 * 89.16529 * 8 7 5 11 11 C 1.34774 * 120.00418 * 105.86301 * 10 8 7 12 12 O 1.21649 * 119.99947 * 359.97438 * 11 10 8 13 13 C 1.47060 * 120.00458 * 180.02562 * 11 10 8 14 14 C 1.35861 * 125.43009 * 180.02562 * 13 11 10 15 15 C 1.41588 * 107.72800 * 179.97438 * 14 13 11 16 16 C 1.40070 * 133.37650 * 180.02562 * 15 14 13 17 17 C 1.36470 * 119.82752 * 180.22831 * 16 15 14 18 18 C 1.38902 * 120.61297 * 359.48781 * 17 16 15 19 19 C 1.50705 * 119.67449 * 180.26262 * 18 17 16 20 20 O 1.42897 * 109.47434 * 120.24842 * 19 18 17 21 21 Si 1.86298 * 109.47030 * 0.24709 * 19 18 17 22 22 C 1.37705 * 120.65134 * 0.51010 * 18 17 16 23 23 C 1.39186 * 119.80813 * 359.75361 * 22 18 17 24 24 N 1.37487 * 133.19089 * 180.02562 * 23 22 18 25 25 C 1.53774 * 113.61551 * 179.97438 * 5 3 2 26 26 H 1.08991 * 109.47624 * 300.00162 * 1 2 3 27 27 H 1.09000 * 109.46883 * 60.00572 * 1 2 3 28 28 H 1.09003 * 109.46887 * 180.02562 * 1 2 3 29 29 H 1.08997 * 113.61328 * 25.47525 * 7 5 3 30 30 H 1.08996 * 113.69524 * 254.49588 * 7 5 3 31 31 H 0.96997 * 119.99674 * 285.86168 * 10 8 7 32 32 H 1.08004 * 126.13192 * 359.95888 * 14 13 11 33 33 H 1.08002 * 120.08332 * 359.94264 * 16 15 14 34 34 H 1.08003 * 119.69597 * 179.74193 * 17 16 15 35 35 H 1.09000 * 109.47195 * 240.25004 * 19 18 17 36 36 H 0.96696 * 114.00461 * 180.02562 * 20 19 18 37 37 H 1.48498 * 110.00134 * 59.99916 * 21 19 18 38 38 H 1.48498 * 109.99972 * 181.32073 * 21 19 18 39 39 H 1.07998 * 120.09983 * 179.77081 * 22 18 17 40 40 H 0.97004 * 125.60553 * 359.95028 * 24 23 22 41 41 H 1.09000 * 113.61377 * 105.46786 * 25 5 3 42 42 H 1.09003 * 113.69391 * 334.57387 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2750 0.0006 6 1 4.0233 0.6366 0.7568 7 6 4.1929 1.1231 -1.3985 8 6 5.1814 2.2267 -0.9865 9 1 5.3978 2.9386 -1.7831 10 7 6.3905 1.7180 -0.3342 11 6 7.5609 1.7026 -1.0022 12 8 7.6133 2.1107 -2.1470 13 6 8.7746 1.1914 -0.3476 14 6 10.0073 1.1256 -0.9150 15 6 10.8939 0.5764 0.0425 16 6 12.2624 0.2782 0.0268 17 6 12.8517 -0.2643 1.1317 18 6 12.1090 -0.5148 2.2785 19 6 12.7825 -1.1089 3.4886 20 8 12.6470 -0.2157 4.5958 21 14 14.5898 -1.3768 3.1245 22 6 10.7622 -0.2302 2.3187 23 6 10.1373 0.3185 1.2027 24 7 8.8430 0.7022 0.9425 25 6 4.1076 2.7143 -0.0001 26 1 -0.3634 0.5138 0.8899 27 1 -0.3633 0.5137 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 3.5259 1.4149 -2.2097 30 1 4.6643 0.1545 -1.5645 31 1 6.3486 1.3923 0.5785 32 1 10.2646 1.4363 -1.9169 33 1 12.8487 0.4728 -0.8591 34 1 13.9062 -0.4973 1.1158 35 1 12.3157 -2.0632 3.7324 36 1 13.0584 -0.5343 5.4109 37 1 15.2379 -0.0830 2.7906 38 1 15.2588 -1.9918 4.2990 39 1 10.1926 -0.4320 3.2138 40 1 8.0998 0.6393 1.5628 41 1 4.5102 3.0298 0.9624 42 1 3.4182 3.4414 -0.4294 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_13158378.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:03:32 Heat of formation + Delta-G solvation = -55.236813 kcal Electronic energy + Delta-G solvation = -26967.391924 eV Core-core repulsion = 22880.873148 eV Total energy + Delta-G solvation = -4086.518776 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.130 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.72115 -42.01342 -40.78057 -39.34381 -38.74409 -37.38484 -37.09822 -34.59775 -33.29253 -31.21507 -30.42517 -29.51778 -27.58520 -27.03917 -26.50563 -24.45935 -23.25444 -22.52302 -21.92686 -21.29090 -20.58955 -19.67807 -18.83716 -18.55352 -18.06313 -17.77544 -17.43140 -17.29572 -16.89214 -16.45559 -16.37457 -15.93367 -15.41835 -15.31936 -15.09965 -14.95431 -14.81236 -14.63389 -14.28774 -14.24468 -13.87383 -13.83633 -13.58181 -13.49455 -13.23809 -12.93374 -12.71479 -12.33131 -12.13214 -12.04662 -11.91999 -11.83767 -11.67929 -11.39878 -11.32033 -10.93662 -10.51363 -10.37576 -9.30778 -8.80858 -4.95904 -0.33677 0.54102 0.98061 1.09088 1.26592 1.59428 1.63257 1.70988 1.83539 1.96754 2.21240 2.74271 3.05066 3.13222 3.30217 3.43477 3.54623 3.59247 3.61647 3.82971 3.87224 4.02654 4.11364 4.19053 4.19326 4.28476 4.30704 4.37910 4.43225 4.46801 4.50853 4.55584 4.57627 4.63771 4.69067 4.78721 4.90809 4.97292 5.22240 5.32766 5.36370 5.40655 5.55879 5.61824 5.96550 6.14286 6.30440 6.39254 6.66712 6.92266 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.503 6.503 5 C -0.114 4.114 6 H 0.124 0.876 7 C -0.131 4.131 8 C 0.123 3.877 9 H 0.118 0.882 10 N -0.714 5.714 11 C 0.590 3.410 12 O -0.512 6.512 13 C 0.010 3.990 14 C -0.096 4.096 15 C -0.118 4.118 16 C -0.050 4.050 17 C -0.143 4.143 18 C -0.040 4.040 19 C -0.077 4.077 20 O -0.537 6.537 21 Si 0.686 3.314 22 C -0.104 4.104 23 C 0.117 3.883 24 N -0.579 5.579 25 C -0.124 4.124 26 H 0.064 0.936 27 H 0.064 0.936 28 H 0.103 0.897 29 H 0.101 0.899 30 H 0.088 0.912 31 H 0.397 0.603 32 H 0.159 0.841 33 H 0.134 0.866 34 H 0.130 0.870 35 H 0.077 0.923 36 H 0.380 0.620 37 H -0.254 1.254 38 H -0.262 1.262 39 H 0.125 0.875 40 H 0.417 0.583 41 H 0.086 0.914 42 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.060 -5.007 2.247 5.488 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.390 6.390 5 C -0.133 4.133 6 H 0.141 0.859 7 C -0.170 4.170 8 C 0.017 3.983 9 H 0.136 0.864 10 N -0.365 5.365 11 C 0.377 3.623 12 O -0.386 6.386 13 C -0.099 4.099 14 C -0.122 4.122 15 C -0.122 4.122 16 C -0.068 4.068 17 C -0.161 4.161 18 C -0.042 4.042 19 C -0.186 4.186 20 O -0.344 6.344 21 Si 0.587 3.413 22 C -0.124 4.124 23 C 0.007 3.993 24 N -0.184 5.184 25 C -0.162 4.162 26 H 0.083 0.917 27 H 0.083 0.917 28 H 0.122 0.878 29 H 0.120 0.880 30 H 0.107 0.893 31 H 0.231 0.769 32 H 0.177 0.823 33 H 0.152 0.848 34 H 0.147 0.853 35 H 0.095 0.905 36 H 0.228 0.772 37 H -0.178 1.178 38 H -0.188 1.188 39 H 0.143 0.857 40 H 0.254 0.746 41 H 0.104 0.896 42 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges 0.191 -3.835 1.212 4.027 hybrid contribution -1.079 0.011 2.199 2.450 sum -0.888 -3.825 3.412 5.202 Atomic orbital electron populations 1.23331 0.75861 1.04053 1.02760 1.86517 1.23801 1.33315 1.83784 1.23527 0.91616 0.81467 0.72181 1.90694 1.66939 1.36417 1.44938 1.22705 0.87807 1.00948 1.01822 0.85853 1.23452 0.97742 1.01181 0.94589 1.21826 0.83179 0.96526 0.96724 0.86384 1.45560 1.08053 1.65659 1.17255 1.17174 0.81499 0.77993 0.85639 1.90894 1.84921 1.46298 1.16512 1.20008 0.95843 1.08282 0.85739 1.20982 0.89886 1.01385 0.99994 1.18217 0.94271 1.05752 0.93974 1.20356 0.92159 0.96011 0.98297 1.20419 0.99485 1.02882 0.93348 1.18933 0.92689 0.99032 0.93565 1.24822 1.11805 0.94584 0.87391 1.86590 1.79664 1.47154 1.20991 0.94914 0.73971 0.85182 0.87185 1.19820 0.94252 1.02408 0.95951 1.18272 0.83949 1.00753 0.96305 1.41862 1.08847 1.55106 1.12583 1.23357 0.96940 0.94901 1.00991 0.91731 0.91676 0.87820 0.88021 0.89293 0.76864 0.82308 0.84845 0.85250 0.90474 0.77204 1.17842 1.18788 0.85666 0.74554 0.89575 0.86637 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.32 10.57 -39.27 -0.41 -0.74 16 3 C 0.47 0.51 7.49 36.00 0.27 0.78 16 4 O -0.50 -2.00 15.65 -18.75 -0.29 -2.29 16 5 C -0.11 0.24 4.15 -90.82 -0.38 -0.14 16 6 H 0.12 -0.52 8.14 -51.93 -0.42 -0.94 16 7 C -0.13 0.26 7.45 -25.78 -0.19 0.07 16 8 C 0.12 -0.21 4.29 -67.14 -0.29 -0.50 16 9 H 0.12 -0.03 7.50 -51.93 -0.39 -0.42 16 10 N -0.71 1.47 5.26 -54.23 -0.29 1.18 16 11 C 0.59 0.70 7.80 -12.68 -0.10 0.61 16 12 O -0.51 -2.48 16.46 5.23 0.09 -2.40 16 13 C 0.01 0.01 6.97 -82.29 -0.57 -0.57 16 14 C -0.10 -0.16 10.53 -39.16 -0.41 -0.57 16 15 C -0.12 -0.19 6.16 -106.93 -0.66 -0.85 16 16 C -0.05 -0.02 10.06 -39.53 -0.40 -0.42 16 17 C -0.14 -0.03 8.59 -39.97 -0.34 -0.37 16 18 C -0.04 -0.03 5.43 -104.57 -0.57 -0.60 16 19 C -0.08 0.05 2.80 36.01 0.10 0.15 16 20 O -0.54 -0.30 12.73 -35.23 -0.45 -0.75 16 21 Si 0.69 -0.90 29.75 -169.99 -5.06 -5.96 16 22 C -0.10 -0.08 9.61 -39.42 -0.38 -0.46 16 23 C 0.12 0.12 7.25 -83.98 -0.61 -0.49 16 24 N -0.58 0.59 6.07 -7.36 -0.04 0.54 16 25 C -0.12 0.29 7.14 -25.94 -0.19 0.10 16 26 H 0.06 -0.05 8.13 -51.93 -0.42 -0.48 16 27 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 28 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 29 H 0.10 -0.18 8.10 -51.93 -0.42 -0.60 16 30 H 0.09 -0.17 8.14 -51.93 -0.42 -0.60 16 31 H 0.40 -1.91 7.76 -40.82 -0.32 -2.23 16 32 H 0.16 0.14 8.06 -52.48 -0.42 -0.28 16 33 H 0.13 -0.23 8.06 -52.49 -0.42 -0.65 16 34 H 0.13 -0.22 4.82 -52.48 -0.25 -0.47 16 35 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 36 H 0.38 -1.27 8.74 45.56 0.40 -0.87 16 37 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 38 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 39 H 0.13 -0.05 8.06 -52.49 -0.42 -0.47 16 40 H 0.42 -1.76 8.12 -40.82 -0.33 -2.10 16 41 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 42 H 0.12 -0.13 7.44 -51.93 -0.39 -0.51 16 LS Contribution 360.43 15.07 5.43 5.43 Total: 0.00 -10.47 360.43 -9.79 -20.25 By element: Atomic # 1 Polarization: -7.93 SS G_CDS: -5.11 Total: -13.04 kcal Atomic # 6 Polarization: 1.42 SS G_CDS: -3.65 Total: -2.23 kcal Atomic # 7 Polarization: 2.05 SS G_CDS: -0.33 Total: 1.72 kcal Atomic # 8 Polarization: -5.11 SS G_CDS: -1.07 Total: -6.18 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: -5.06 Total: -5.96 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -10.47 -9.79 -20.25 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_13158378.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.985 kcal (2) G-P(sol) polarization free energy of solvation -10.466 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.450 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.786 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.252 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.237 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds