Wall clock time and date at job start Sat Mar 6 2021 16:03:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34232 * 116.99674 * 2 1 4 4 O 1.20825 * 119.99890 * 0.02562 * 3 2 1 5 5 C 1.50696 * 119.99645 * 180.02562 * 3 2 1 6 6 H 1.09004 * 112.85292 * 48.80654 * 5 3 2 7 7 C 1.53785 * 113.61298 * 180.02562 * 5 3 2 8 8 C 1.53783 * 87.08398 * 139.98021 * 7 5 3 9 9 H 1.08992 * 113.61450 * 219.93450 * 8 7 5 10 10 N 1.46500 * 113.61385 * 89.11516 * 8 7 5 11 11 C 1.34774 * 119.99934 * 156.53557 * 10 8 7 12 12 O 1.21580 * 119.99908 * 359.97438 * 11 10 8 13 13 C 1.47570 * 119.99689 * 180.02562 * 11 10 8 14 14 C 1.40215 * 120.11758 * 179.97438 * 13 11 10 15 15 O 1.35648 * 120.00175 * 0.02562 * 14 13 11 16 16 C 1.38813 * 119.99397 * 180.02562 * 14 13 11 17 17 C 1.37775 * 120.24556 * 359.97438 * 16 14 13 18 18 C 1.39844 * 120.24138 * 0.02562 * 17 16 14 19 19 C 1.47826 * 119.99592 * 179.97438 * 18 17 16 20 20 C 1.35935 * 125.92790 * 359.71013 * 19 18 17 21 21 C 1.40971 * 106.73483 * 179.91298 * 20 19 18 22 22 C 1.34702 * 107.03474 * 0.35291 * 21 20 19 23 23 C 1.50699 * 125.66721 * 179.75832 * 22 21 20 24 24 O 1.42896 * 109.47381 * 300.00099 * 23 22 21 25 25 Si 1.86306 * 109.47043 * 180.02562 * 23 22 21 26 26 O 1.34344 * 108.66696 * 359.78408 * 22 21 20 27 27 C 1.39166 * 120.00517 * 0.02562 * 18 17 16 28 28 C 1.53789 * 87.17050 * 334.52779 * 8 7 5 29 29 H 1.09000 * 109.46905 * 299.99905 * 1 2 3 30 30 H 1.09005 * 109.47116 * 59.99914 * 1 2 3 31 31 H 1.09001 * 109.46854 * 179.97438 * 1 2 3 32 32 H 1.09001 * 113.61309 * 25.43209 * 7 5 3 33 33 H 1.09002 * 113.69164 * 254.53874 * 7 5 3 34 34 H 0.97008 * 119.99744 * 336.52616 * 10 8 7 35 35 H 0.96699 * 113.99720 * 270.01605 * 15 14 13 36 36 H 1.08006 * 119.87893 * 180.02562 * 16 14 13 37 37 H 1.08003 * 119.87629 * 179.74219 * 17 16 14 38 38 H 1.07998 * 126.63478 * 0.02562 * 20 19 18 39 39 H 1.08008 * 126.47936 * 180.10183 * 21 20 19 40 40 H 1.09003 * 109.46906 * 60.00200 * 23 22 21 41 41 H 0.96694 * 113.99931 * 179.97438 * 24 23 22 42 42 H 1.48500 * 109.99659 * 298.68201 * 25 23 22 43 43 H 1.48497 * 110.00119 * 59.99913 * 25 23 22 44 44 H 1.07999 * 120.12794 * 180.02562 * 27 18 17 45 45 H 1.09002 * 113.61224 * 140.02457 * 28 8 7 46 46 H 1.09006 * 113.61152 * 270.92397 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 4.0234 0.6366 -0.7568 7 6 4.1077 2.7143 0.0001 8 6 5.1815 2.2264 0.9870 9 1 5.3978 2.9379 1.7837 10 7 6.3905 1.7179 0.3345 11 6 7.5609 1.7021 1.0026 12 8 7.6134 2.1102 2.1466 13 6 8.7789 1.1904 0.3451 14 6 9.9980 1.1733 1.0376 15 8 10.0592 1.6271 2.3144 16 6 11.1423 0.6919 0.4164 17 6 11.0857 0.2293 -0.8801 18 6 9.8752 0.2417 -1.5802 19 6 9.8208 -0.2554 -2.9713 20 6 10.8694 -0.7435 -3.6854 21 6 10.3662 -1.1006 -4.9529 22 6 9.0513 -0.8084 -4.9521 23 6 8.1037 -1.0187 -6.1048 24 8 8.5477 -0.2596 -7.2311 25 14 6.3954 -0.4597 -5.6144 26 8 8.7250 -0.2978 -3.7530 27 6 8.7220 0.7231 -0.9677 28 6 4.1929 1.1225 1.3985 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 3.4174 3.4402 0.4298 33 1 4.5105 3.0312 -0.9619 34 1 6.3487 1.3924 -0.5784 35 1 10.2569 2.5708 2.3873 36 1 12.0802 0.6792 0.9518 37 1 11.9805 -0.1401 -1.3590 38 1 11.8903 -0.8409 -3.3466 39 1 10.9295 -1.5242 -5.7714 40 1 8.0790 -2.0766 -6.3665 41 1 7.9839 -0.3477 -8.0117 42 1 5.9091 -1.2628 -4.4638 43 1 6.4160 0.9811 -5.2555 44 1 7.7860 0.7332 -1.5064 45 1 4.6644 0.1538 1.5641 46 1 3.5258 1.4140 2.2098 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_13259648.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:03:39 Heat of formation + Delta-G solvation = -107.564150 kcal Electronic energy + Delta-G solvation = -33565.411374 eV Core-core repulsion = 28776.458901 eV Total energy + Delta-G solvation = -4788.952473 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.134 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -43.76657 -42.10391 -41.43380 -40.22265 -38.83906 -38.11434 -37.82765 -37.32115 -34.64806 -34.18300 -32.86590 -32.33481 -30.19550 -29.42709 -27.16231 -26.96551 -26.42022 -25.33154 -23.66241 -23.10793 -22.47016 -21.87939 -21.25469 -20.51919 -19.64795 -19.15061 -18.78926 -18.71759 -17.99773 -17.64803 -17.36721 -17.30921 -17.12282 -16.68694 -16.53003 -16.25064 -15.95839 -15.88369 -15.51878 -15.40639 -14.99371 -14.68930 -14.52713 -14.41083 -14.23589 -14.15008 -13.95226 -13.80700 -13.62462 -13.47496 -13.27974 -13.19538 -13.13057 -12.87721 -12.73507 -12.15853 -12.00136 -11.89589 -11.82043 -11.79369 -11.34070 -11.11135 -10.86815 -10.71008 -10.43196 -10.38772 -10.16837 -8.95676 -5.19740 -0.62688 -0.29937 0.69505 1.04158 1.13228 1.35675 1.51842 1.57471 1.68182 1.85920 1.89362 1.89644 2.55447 3.01816 3.10406 3.12586 3.20198 3.33994 3.46485 3.55235 3.58544 3.66088 3.73483 3.90810 3.92009 3.93697 4.05705 4.14504 4.17443 4.22346 4.29817 4.37036 4.49320 4.52286 4.54539 4.57800 4.63044 4.67091 4.71837 4.76092 4.77919 4.86953 4.94380 5.03876 5.09235 5.34792 5.36490 5.38658 5.39884 5.93899 6.30943 6.38127 6.61519 6.71071 7.10268 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.503 6.503 5 C -0.115 4.115 6 H 0.123 0.877 7 C -0.124 4.124 8 C 0.124 3.876 9 H 0.116 0.884 10 N -0.714 5.714 11 C 0.565 3.435 12 O -0.511 6.511 13 C -0.164 4.164 14 C 0.181 3.819 15 O -0.475 6.475 16 C -0.147 4.147 17 C -0.051 4.051 18 C -0.033 4.033 19 C 0.032 3.968 20 C -0.185 4.185 21 C -0.164 4.164 22 C -0.009 4.009 23 C -0.034 4.034 24 O -0.543 6.543 25 Si 0.704 3.296 26 O -0.173 6.173 27 C -0.055 4.055 28 C -0.131 4.131 29 H 0.064 0.936 30 H 0.064 0.936 31 H 0.103 0.897 32 H 0.115 0.885 33 H 0.085 0.915 34 H 0.399 0.601 35 H 0.400 0.600 36 H 0.147 0.853 37 H 0.141 0.859 38 H 0.157 0.843 39 H 0.157 0.843 40 H 0.095 0.905 41 H 0.391 0.609 42 H -0.251 1.251 43 H -0.249 1.249 44 H 0.132 0.868 45 H 0.088 0.912 46 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.134 -2.997 -6.050 6.753 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.313 3.687 4 O -0.390 6.390 5 C -0.134 4.134 6 H 0.141 0.859 7 C -0.162 4.162 8 C 0.018 3.982 9 H 0.134 0.866 10 N -0.367 5.367 11 C 0.352 3.648 12 O -0.386 6.386 13 C -0.168 4.168 14 C 0.135 3.865 15 O -0.286 6.286 16 C -0.166 4.166 17 C -0.069 4.069 18 C -0.033 4.033 19 C -0.017 4.017 20 C -0.204 4.204 21 C -0.183 4.183 22 C -0.058 4.058 23 C -0.144 4.144 24 O -0.350 6.350 25 Si 0.603 3.397 26 O -0.071 6.071 27 C -0.074 4.074 28 C -0.170 4.170 29 H 0.083 0.917 30 H 0.083 0.917 31 H 0.122 0.878 32 H 0.133 0.867 33 H 0.104 0.896 34 H 0.235 0.765 35 H 0.259 0.741 36 H 0.165 0.835 37 H 0.159 0.841 38 H 0.175 0.825 39 H 0.174 0.826 40 H 0.113 0.887 41 H 0.240 0.760 42 H -0.175 1.175 43 H -0.173 1.173 44 H 0.149 0.851 45 H 0.106 0.894 46 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -0.516 -2.359 -3.906 4.592 hybrid contribution 0.509 -0.088 -0.720 0.886 sum -0.008 -2.447 -4.626 5.233 Atomic orbital electron populations 1.23330 0.75911 1.04019 1.02741 1.86524 1.23763 1.33316 1.83785 1.23523 0.91590 0.81456 0.72128 1.90687 1.66927 1.36402 1.45002 1.22709 0.87784 1.01010 1.01879 0.85929 1.23368 0.97005 0.94834 1.01034 1.21791 0.83351 0.96411 0.96601 0.86573 1.45630 1.07909 1.65682 1.17484 1.17961 0.82626 0.78330 0.85844 1.90844 1.85389 1.45734 1.16617 1.20238 0.94775 1.07083 0.94712 1.18582 0.90518 0.93806 0.83639 1.84751 1.93292 1.30168 1.20436 1.21410 0.98748 1.01718 0.94680 1.21137 0.96629 0.95713 0.93465 1.17577 0.94350 1.02433 0.88951 1.20289 0.84569 1.05268 0.91588 1.21869 0.99822 1.04523 0.94189 1.21539 0.93505 1.04740 0.98497 1.21349 0.95501 1.03473 0.85487 1.23753 1.06001 0.99194 0.85475 1.86455 1.55707 1.70151 1.22710 0.95203 0.77420 0.81276 0.85804 1.83923 1.35837 1.65156 1.22228 1.21258 0.98082 0.95090 0.92965 1.23452 0.97790 1.01274 0.94477 0.91705 0.91721 0.87846 0.86689 0.89619 0.76503 0.74065 0.83485 0.84085 0.82529 0.82570 0.88744 0.75997 1.17507 1.17270 0.85063 0.89363 0.88105 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.61 10.57 -39.26 -0.41 -1.03 16 3 C 0.47 0.96 7.49 36.00 0.27 1.23 16 4 O -0.50 -2.36 15.65 -18.75 -0.29 -2.65 16 5 C -0.11 0.07 4.15 -90.82 -0.38 -0.31 16 6 H 0.12 -0.27 8.14 -51.93 -0.42 -0.70 16 7 C -0.12 0.12 7.15 -25.92 -0.19 -0.07 16 8 C 0.12 -0.03 4.30 -67.11 -0.29 -0.32 16 9 H 0.12 0.11 7.50 -51.93 -0.39 -0.28 16 10 N -0.71 0.03 5.21 -54.05 -0.28 -0.25 16 11 C 0.57 1.47 7.76 -12.45 -0.10 1.38 16 12 O -0.51 -2.93 14.76 -16.66 -0.25 -3.18 16 13 C -0.16 -0.26 5.88 -104.89 -0.62 -0.88 16 14 C 0.18 0.26 6.72 -38.63 -0.26 0.00 16 15 O -0.47 -0.95 11.55 -40.60 -0.47 -1.42 16 16 C -0.15 0.08 9.96 -39.54 -0.39 -0.32 16 17 C -0.05 0.04 9.54 -39.15 -0.37 -0.34 16 18 C -0.03 -0.03 5.87 -105.03 -0.62 -0.64 16 19 C 0.03 0.06 7.03 -36.49 -0.26 -0.19 16 20 C -0.19 -0.19 10.26 -39.37 -0.40 -0.60 16 21 C -0.16 -0.26 10.77 -39.80 -0.43 -0.68 16 22 C -0.01 -0.02 6.25 -35.56 -0.22 -0.24 16 23 C -0.03 0.04 2.98 36.00 0.11 0.14 16 24 O -0.54 0.59 12.84 -35.23 -0.45 0.14 16 25 Si 0.70 -1.31 32.10 -169.99 -5.46 -6.77 16 26 O -0.17 -0.50 8.78 4.58 0.04 -0.46 16 27 C -0.06 -0.04 9.20 -38.78 -0.36 -0.39 16 28 C -0.13 0.07 7.45 -25.77 -0.19 -0.12 16 29 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 30 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 31 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 32 H 0.11 -0.01 7.44 -51.93 -0.39 -0.40 16 33 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 34 H 0.40 -0.79 6.73 -40.82 -0.27 -1.06 16 35 H 0.40 -0.71 9.06 45.56 0.41 -0.30 16 36 H 0.15 -0.36 8.06 -52.48 -0.42 -0.79 16 37 H 0.14 -0.43 6.96 -52.48 -0.37 -0.80 16 38 H 0.16 -0.25 7.25 -52.49 -0.38 -0.63 16 39 H 0.16 0.00 8.06 -52.48 -0.42 -0.43 16 40 H 0.09 -0.32 7.96 -51.93 -0.41 -0.73 16 41 H 0.39 -2.55 8.74 45.56 0.40 -2.15 16 42 H -0.25 -0.17 7.11 56.52 0.40 0.23 16 43 H -0.25 -0.42 7.11 56.52 0.40 -0.01 16 44 H 0.13 -0.10 6.24 -52.49 -0.33 -0.43 16 45 H 0.09 -0.02 8.14 -51.93 -0.42 -0.45 16 46 H 0.10 -0.05 8.10 -51.93 -0.42 -0.47 16 LS Contribution 399.89 15.07 6.03 6.03 Total: 0.00 -12.54 399.89 -9.90 -22.44 By element: Atomic # 1 Polarization: -6.83 SS G_CDS: -4.72 Total: -11.55 kcal Atomic # 6 Polarization: 2.33 SS G_CDS: -3.62 Total: -1.30 kcal Atomic # 7 Polarization: 0.03 SS G_CDS: -0.28 Total: -0.25 kcal Atomic # 8 Polarization: -6.76 SS G_CDS: -1.84 Total: -8.60 kcal Atomic # 14 Polarization: -1.31 SS G_CDS: -5.46 Total: -6.77 kcal Total LS contribution 6.03 Total: 6.03 kcal Total: -12.54 -9.90 -22.44 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_13259648.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.124 kcal (2) G-P(sol) polarization free energy of solvation -12.544 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.668 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.896 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.440 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.564 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds