Wall clock time and date at job start Sat Mar 6 2021 16:03:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45192 * 1 3 3 C 1.34227 * 117.00499 * 2 1 4 4 O 1.20833 * 119.99547 * 359.97438 * 3 2 1 5 5 C 1.50696 * 120.00654 * 179.97438 * 3 2 1 6 6 H 1.09001 * 112.84471 * 48.80314 * 5 3 2 7 7 C 1.53773 * 113.61925 * 180.02562 * 5 3 2 8 8 C 1.53779 * 87.08455 * 140.06522 * 7 5 3 9 9 H 1.09000 * 113.61289 * 219.93781 * 8 7 5 10 10 N 1.46502 * 113.61486 * 89.11612 * 8 7 5 11 11 C 1.34774 * 119.99884 * 155.00101 * 10 8 7 12 12 O 1.21513 * 120.00239 * 359.97438 * 11 10 8 13 13 C 1.48172 * 119.99625 * 179.97438 * 11 10 8 14 14 N 1.32718 * 119.72668 * 359.97438 * 13 11 10 15 15 C 1.31515 * 121.64155 * 180.02562 * 14 13 11 16 16 C 1.38556 * 120.90641 * 0.02562 * 15 14 13 17 17 C 1.50700 * 120.32394 * 179.97438 * 16 15 14 18 18 O 1.42903 * 109.47469 * 120.02068 * 17 16 15 19 19 Si 1.86295 * 109.47249 * 0.02562 * 17 16 15 20 20 C 1.38623 * 119.35381 * 359.97438 * 16 15 14 21 21 C 1.38595 * 118.48634 * 0.02562 * 20 16 15 22 22 C 1.53781 * 113.69133 * 277.54133 * 5 3 2 23 23 H 1.09005 * 109.47314 * 60.00150 * 1 2 3 24 24 H 1.08999 * 109.47567 * 179.97438 * 1 2 3 25 25 H 1.09006 * 109.47358 * 300.00197 * 1 2 3 26 26 H 1.09006 * 113.61370 * 25.50859 * 7 5 3 27 27 H 1.08998 * 113.61386 * 254.61686 * 7 5 3 28 28 H 0.97003 * 119.99950 * 335.00086 * 10 8 7 29 29 H 1.08001 * 119.54644 * 179.97438 * 15 14 13 30 30 H 1.09003 * 109.46810 * 240.01705 * 17 16 15 31 31 H 0.96701 * 113.99619 * 299.99750 * 18 17 16 32 32 H 1.48506 * 110.00175 * 180.02562 * 19 17 16 33 33 H 1.48499 * 110.00277 * 301.32192 * 19 17 16 34 34 H 1.07998 * 120.76123 * 179.97438 * 20 16 15 35 35 H 1.08000 * 120.46738 * 179.72634 * 21 20 16 36 36 H 1.08991 * 113.62140 * 105.45510 * 22 5 3 37 37 H 1.09004 * 113.60966 * 334.54809 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 1 4.0238 0.6361 -0.7550 7 6 4.1078 2.7141 0.0011 8 6 5.1821 2.2260 0.9873 9 1 5.3989 2.9374 1.7840 10 7 6.3908 1.7175 0.3340 11 6 7.5677 1.7302 0.9906 12 8 7.6264 2.1638 2.1242 13 6 8.7900 1.2153 0.3300 14 7 8.7196 0.7425 -0.9081 15 6 9.7804 0.2761 -1.5299 16 6 11.0194 0.2608 -0.9099 17 6 12.2262 -0.2772 -1.6345 18 8 13.2134 0.7502 -1.7441 19 14 11.7269 -0.8427 -3.3379 20 6 11.1381 0.7453 0.3835 21 6 10.0034 1.2307 1.0142 22 6 4.1925 1.1229 1.3969 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3634 -1.0276 -0.0005 25 1 -0.3634 0.5139 0.8900 26 1 3.4177 3.4401 0.4312 27 1 4.5098 3.0297 -0.9616 28 1 6.3440 1.3717 -0.5711 29 1 9.6843 -0.1010 -2.5374 30 1 12.6384 -1.1192 -1.0783 31 1 12.9150 1.5322 -2.2284 32 1 12.9082 -1.3761 -4.0626 33 1 10.6776 -1.8887 -3.2386 34 1 12.0927 0.7439 0.8885 35 1 10.0584 1.6117 2.0233 36 1 4.6630 0.1536 1.5614 37 1 3.5256 1.4141 2.2085 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_13287726.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:03:45 Heat of formation + Delta-G solvation = -79.158661 kcal Electronic energy + Delta-G solvation = -22618.430318 eV Core-core repulsion = 18942.864112 eV Total energy + Delta-G solvation = -3675.566205 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.114 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.14614 -41.70500 -40.53958 -39.09851 -37.98929 -37.30925 -34.66510 -33.57162 -33.01123 -29.50598 -28.11962 -26.93833 -26.78268 -25.09595 -24.09347 -22.55880 -22.02479 -20.44195 -19.49903 -18.77022 -18.57403 -17.85646 -17.72260 -17.35720 -16.83818 -16.74376 -16.48125 -16.23462 -16.01121 -15.60840 -15.09991 -14.92423 -14.60764 -14.44429 -14.32360 -14.16676 -13.72196 -13.63184 -13.47930 -13.15986 -12.85124 -12.69015 -12.20023 -11.93565 -11.82177 -11.77327 -11.39680 -11.31214 -11.13617 -10.74720 -10.70356 -10.36501 -10.14319 -5.21578 -0.63293 0.00081 1.05922 1.16608 1.44439 1.56288 1.71501 1.81603 1.86948 2.63237 2.86333 3.16189 3.20523 3.25202 3.37590 3.53906 3.60743 3.67046 3.72544 3.87682 3.98175 4.07009 4.16624 4.24408 4.25611 4.40628 4.47447 4.54128 4.59829 4.62427 4.69538 4.78137 4.80773 4.89595 4.93824 5.29436 5.39689 5.41216 6.23769 6.33998 6.55296 6.74334 7.05481 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.504 6.504 5 C -0.113 4.113 6 H 0.126 0.874 7 C -0.124 4.124 8 C 0.120 3.880 9 H 0.116 0.884 10 N -0.695 5.695 11 C 0.577 3.423 12 O -0.524 6.524 13 C 0.080 3.920 14 N -0.453 5.453 15 C 0.103 3.897 16 C -0.149 4.149 17 C -0.067 4.067 18 O -0.536 6.536 19 Si 0.688 3.312 20 C -0.053 4.053 21 C -0.106 4.106 22 C -0.131 4.131 23 H 0.064 0.936 24 H 0.103 0.897 25 H 0.064 0.936 26 H 0.114 0.886 27 H 0.088 0.912 28 H 0.413 0.587 29 H 0.164 0.836 30 H 0.121 0.879 31 H 0.381 0.619 32 H -0.249 1.249 33 H -0.252 1.252 34 H 0.148 0.852 35 H 0.153 0.847 36 H 0.087 0.913 37 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.720 -1.228 -3.521 3.798 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.313 3.687 4 O -0.391 6.391 5 C -0.132 4.132 6 H 0.144 0.856 7 C -0.161 4.161 8 C 0.014 3.986 9 H 0.134 0.866 10 N -0.347 5.347 11 C 0.362 3.638 12 O -0.399 6.399 13 C -0.058 4.058 14 N -0.164 5.164 15 C -0.056 4.056 16 C -0.151 4.151 17 C -0.179 4.179 18 O -0.341 6.341 19 Si 0.589 3.411 20 C -0.079 4.079 21 C -0.127 4.127 22 C -0.170 4.170 23 H 0.083 0.917 24 H 0.121 0.879 25 H 0.083 0.917 26 H 0.132 0.868 27 H 0.106 0.894 28 H 0.250 0.750 29 H 0.181 0.819 30 H 0.138 0.862 31 H 0.229 0.771 32 H -0.174 1.174 33 H -0.177 1.177 34 H 0.166 0.834 35 H 0.171 0.829 36 H 0.106 0.894 37 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -0.024 -1.706 -3.316 3.729 hybrid contribution 0.564 -0.418 0.512 0.869 sum 0.540 -2.123 -2.804 3.559 Atomic orbital electron populations 1.23321 0.75981 1.03983 1.02719 1.86520 1.23704 1.33376 1.83792 1.23564 0.91657 0.81416 0.72082 1.90689 1.66972 1.36418 1.45035 1.22661 0.87634 1.01107 1.01829 0.85587 1.23361 0.96839 0.94817 1.01128 1.21848 0.83475 0.96505 0.96750 0.86569 1.45496 1.06780 1.63341 1.19046 1.17841 0.82550 0.78146 0.85231 1.90830 1.85530 1.45998 1.17527 1.21111 0.94014 0.99399 0.91315 1.67500 1.32326 1.08236 1.08309 1.22619 0.87418 0.96117 0.99490 1.21669 0.96931 1.00211 0.96338 1.25056 0.88910 0.94343 1.09559 1.86541 1.38316 1.29739 1.79533 0.94769 0.81414 0.86733 0.78161 1.21564 0.99209 0.93697 0.93404 1.22233 0.91637 0.96992 1.01854 1.23391 0.97777 1.01168 0.94684 0.91738 0.87890 0.91740 0.86805 0.89384 0.74998 0.81891 0.86170 0.77105 1.17353 1.17707 0.83397 0.82916 0.89397 0.88166 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.51 10.56 -39.25 -0.41 -0.92 16 3 C 0.47 0.78 7.49 36.00 0.27 1.05 16 4 O -0.50 -2.23 15.65 -18.76 -0.29 -2.52 16 5 C -0.11 0.14 4.13 -90.97 -0.38 -0.24 16 6 H 0.13 -0.37 8.14 -51.93 -0.42 -0.79 16 7 C -0.12 0.19 7.15 -25.92 -0.19 0.00 16 8 C 0.12 -0.10 4.32 -67.14 -0.29 -0.39 16 9 H 0.12 0.03 7.46 -51.93 -0.39 -0.36 16 10 N -0.70 0.38 5.25 -53.87 -0.28 0.09 16 11 C 0.58 1.09 7.81 -12.18 -0.10 1.00 16 12 O -0.52 -2.54 15.92 5.35 0.09 -2.46 16 13 C 0.08 0.07 6.75 -83.01 -0.56 -0.49 16 14 N -0.45 0.01 9.54 -9.80 -0.09 -0.08 16 15 C 0.10 -0.16 9.84 -17.57 -0.17 -0.33 16 16 C -0.15 0.26 5.40 -104.36 -0.56 -0.30 16 17 C -0.07 0.16 2.83 36.01 0.10 0.27 16 18 O -0.54 0.97 12.78 -35.23 -0.45 0.52 16 19 Si 0.69 -2.14 29.82 -169.99 -5.07 -7.21 16 20 C -0.05 0.06 9.76 -39.31 -0.38 -0.32 16 21 C -0.11 -0.01 9.63 -39.05 -0.38 -0.39 16 22 C -0.13 0.16 7.43 -25.94 -0.19 -0.03 16 23 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 24 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 25 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 26 H 0.11 -0.06 7.44 -51.93 -0.39 -0.45 16 27 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 28 H 0.41 -0.84 8.03 -40.82 -0.33 -1.17 16 29 H 0.16 -0.63 4.89 -52.49 -0.26 -0.89 16 30 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 31 H 0.38 -2.13 8.70 45.56 0.40 -1.73 16 32 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 33 H -0.25 0.24 7.11 56.52 0.40 0.64 16 34 H 0.15 -0.35 8.06 -52.49 -0.42 -0.77 16 35 H 0.15 -0.02 7.64 -52.49 -0.40 -0.42 16 36 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 37 H 0.10 -0.12 8.10 -51.93 -0.42 -0.54 16 LS Contribution 323.97 15.07 4.88 4.88 Total: 0.00 -8.71 323.97 -7.75 -16.46 By element: Atomic # 1 Polarization: -5.27 SS G_CDS: -4.35 Total: -9.63 kcal Atomic # 6 Polarization: 2.62 SS G_CDS: -1.76 Total: 0.86 kcal Atomic # 7 Polarization: 0.39 SS G_CDS: -0.38 Total: 0.01 kcal Atomic # 8 Polarization: -4.31 SS G_CDS: -1.07 Total: -5.38 kcal Atomic # 14 Polarization: -2.14 SS G_CDS: -5.07 Total: -7.21 kcal Total LS contribution 4.88 Total: 4.88 kcal Total: -8.71 -7.75 -16.46 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_13287726.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.702 kcal (2) G-P(sol) polarization free energy of solvation -8.710 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.412 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.747 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.457 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.159 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds