Wall clock time and date at job start Sat Mar 6 2021 16:03:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34222 * 116.99867 * 2 1 4 4 O 1.20830 * 120.00323 * 359.72425 * 3 2 1 5 5 C 1.50706 * 120.00024 * 180.02562 * 3 2 1 6 6 H 1.09000 * 112.84306 * 310.92373 * 5 3 2 7 7 C 1.53774 * 113.61363 * 82.22530 * 5 3 2 8 8 C 1.53776 * 87.08297 * 139.98346 * 7 5 3 9 9 H 1.08994 * 113.61749 * 220.01736 * 8 7 5 10 10 N 1.46501 * 113.61456 * 89.11236 * 8 7 5 11 11 C 1.34778 * 119.99771 * 107.50672 * 10 8 7 12 12 O 1.21623 * 120.00053 * 359.97438 * 11 10 8 13 13 C 1.47260 * 120.00008 * 180.02562 * 11 10 8 14 14 C 1.36772 * 126.94322 * 0.02562 * 13 11 10 15 15 N 1.34657 * 108.40178 * 180.02562 * 14 13 11 16 16 C 1.46495 * 124.85473 * 179.97438 * 15 14 13 17 17 C 1.36455 * 110.29214 * 0.02562 * 15 14 13 18 18 C 1.50702 * 125.56699 * 179.97438 * 17 15 14 19 19 O 1.42903 * 109.47167 * 30.00067 * 18 17 15 20 20 Si 1.86306 * 109.46888 * 149.99970 * 18 17 15 21 21 C 1.34477 * 108.85805 * 359.70962 * 17 15 14 22 22 C 1.53779 * 113.61440 * 179.72523 * 5 3 2 23 23 H 1.09001 * 109.47271 * 60.00074 * 1 2 3 24 24 H 1.09002 * 109.47225 * 180.02562 * 1 2 3 25 25 H 1.09009 * 109.46864 * 300.00062 * 1 2 3 26 26 H 1.09006 * 113.61632 * 254.53278 * 7 5 3 27 27 H 1.08998 * 113.61806 * 25.43216 * 7 5 3 28 28 H 0.97001 * 120.00180 * 287.50872 * 10 8 7 29 29 H 1.08005 * 125.80049 * 0.02562 * 14 13 11 30 30 H 1.08998 * 109.47368 * 90.02583 * 16 15 14 31 31 H 1.09000 * 109.47303 * 210.02759 * 16 15 14 32 32 H 1.09000 * 109.47349 * 330.02540 * 16 15 14 33 33 H 1.09001 * 109.47624 * 269.99745 * 18 17 15 34 34 H 0.96699 * 114.00109 * 179.97438 * 19 18 17 35 35 H 1.48502 * 109.99992 * 299.99862 * 20 18 17 36 36 H 1.48494 * 110.00188 * 61.31984 * 20 18 17 37 37 H 1.08006 * 126.83466 * 180.26945 * 21 17 15 38 38 H 1.08997 * 113.61503 * 334.56521 * 22 5 3 39 39 H 1.09003 * 113.61665 * 105.47378 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1959 0.0000 4 8 1.4033 2.2093 -0.0050 5 6 3.5663 1.2749 -0.0006 6 1 4.0237 0.6397 0.7581 7 6 4.1909 1.1170 -1.3969 8 6 5.1809 2.2222 -0.9928 9 1 5.3959 2.9299 -1.7933 10 7 6.3903 1.7163 -0.3389 11 6 7.5665 1.7264 -0.9969 12 8 7.6238 2.1552 -2.1336 13 6 8.7821 1.2174 -0.3398 14 6 8.8800 0.7051 0.9245 15 7 10.1615 0.3536 1.1428 16 6 10.6684 -0.2346 2.3850 17 6 10.9206 0.6247 0.0417 18 6 12.4000 0.3682 -0.0878 19 8 12.7607 -0.7562 0.7169 20 14 12.8154 0.0157 -1.8694 21 6 10.1318 1.1528 -0.9108 22 6 4.1077 2.7142 -0.0073 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3634 -1.0277 0.0005 25 1 -0.3633 0.5139 0.8901 26 1 4.6612 0.1469 -1.5578 27 1 3.5231 1.4046 -2.2090 28 1 6.3445 1.3739 0.5675 29 1 8.0676 0.6002 1.6284 30 1 10.5989 -1.3208 2.3276 31 1 11.7094 0.0559 2.5262 32 1 10.0741 0.1236 3.2256 33 1 12.9518 1.2466 0.2469 34 1 13.7009 -0.9797 0.6817 35 1 12.0694 -1.1799 -2.3379 36 1 12.4744 1.1896 -2.7124 37 1 10.4326 1.4689 -1.8988 38 1 3.4172 3.4384 -0.4394 39 1 4.5110 3.0335 0.9538 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_13287730.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:03:48 Heat of formation + Delta-G solvation = -67.492502 kcal Electronic energy + Delta-G solvation = -23385.224304 eV Core-core repulsion = 19682.852503 eV Total energy + Delta-G solvation = -3702.371801 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.49668 -41.90116 -40.50563 -38.85642 -37.81614 -37.28466 -34.33039 -33.73450 -31.56049 -29.43458 -27.88762 -26.92512 -26.87513 -26.07914 -23.91055 -22.38290 -21.14768 -20.55478 -20.29150 -18.86582 -18.48328 -18.42804 -17.82293 -17.35807 -16.91203 -16.82937 -16.70234 -15.87274 -15.55366 -15.47943 -15.30481 -14.96251 -14.84090 -14.44572 -14.18714 -13.72595 -13.67579 -13.48798 -13.47611 -13.29055 -13.23533 -13.08040 -12.81230 -12.73558 -11.91175 -11.86968 -11.77608 -11.76514 -11.28130 -10.85262 -10.71817 -10.07304 -9.61936 -9.22873 -5.02922 0.72325 0.99924 1.17825 1.41055 1.68864 1.72442 1.86653 2.07506 2.17573 2.60974 3.05465 3.20339 3.29988 3.59385 3.66529 3.72905 3.74184 3.78957 3.97870 4.12508 4.16814 4.22534 4.24581 4.31464 4.39478 4.45592 4.55167 4.58059 4.61881 4.70357 4.75887 4.83602 4.86601 4.91089 5.02105 5.40297 5.53456 5.65163 5.94800 6.10884 6.38206 6.58223 6.75120 7.40384 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.504 6.504 5 C -0.113 4.113 6 H 0.124 0.876 7 C -0.133 4.133 8 C 0.125 3.875 9 H 0.115 0.885 10 N -0.716 5.716 11 C 0.596 3.404 12 O -0.538 6.538 13 C -0.227 4.227 14 C 0.052 3.948 15 N -0.421 5.421 16 C 0.075 3.925 17 C 0.028 3.972 18 C -0.047 4.047 19 O -0.552 6.552 20 Si 0.707 3.293 21 C -0.145 4.145 22 C -0.124 4.124 23 H 0.064 0.936 24 H 0.103 0.897 25 H 0.064 0.936 26 H 0.087 0.913 27 H 0.098 0.902 28 H 0.398 0.602 29 H 0.173 0.827 30 H 0.079 0.921 31 H 0.096 0.904 32 H 0.079 0.921 33 H 0.079 0.921 34 H 0.388 0.612 35 H -0.252 1.252 36 H -0.252 1.252 37 H 0.150 0.850 38 H 0.112 0.888 39 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.714 -3.528 5.427 8.008 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.391 6.391 5 C -0.132 4.132 6 H 0.142 0.858 7 C -0.172 4.172 8 C 0.019 3.981 9 H 0.133 0.867 10 N -0.367 5.367 11 C 0.385 3.615 12 O -0.415 6.415 13 C -0.237 4.237 14 C -0.084 4.084 15 N -0.095 5.095 16 C -0.066 4.066 17 C -0.081 4.081 18 C -0.156 4.156 19 O -0.360 6.360 20 Si 0.606 3.394 21 C -0.169 4.169 22 C -0.162 4.162 23 H 0.083 0.917 24 H 0.121 0.879 25 H 0.082 0.918 26 H 0.106 0.894 27 H 0.117 0.883 28 H 0.233 0.767 29 H 0.190 0.810 30 H 0.097 0.903 31 H 0.115 0.885 32 H 0.098 0.902 33 H 0.097 0.903 34 H 0.236 0.764 35 H -0.177 1.177 36 H -0.176 1.176 37 H 0.167 0.833 38 H 0.131 0.869 39 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 3.743 -3.140 4.221 6.456 hybrid contribution -0.855 -0.010 1.102 1.395 sum 2.888 -3.150 5.323 6.826 Atomic orbital electron populations 1.23321 0.76001 1.03972 1.02713 1.86520 1.23695 1.33397 1.83812 1.23594 0.91697 0.81406 0.72076 1.90687 1.66981 1.36421 1.45038 1.22656 0.87528 1.01089 1.01890 0.85828 1.23411 0.97904 1.01378 0.94459 1.21741 0.83493 0.96247 0.96587 0.86739 1.45490 1.07326 1.65719 1.18162 1.17349 0.81849 0.77111 0.85161 1.90794 1.85859 1.46801 1.18032 1.20195 0.94014 1.13993 0.95508 1.21928 0.86976 1.01939 0.97603 1.43493 1.06882 1.46254 1.12823 1.22187 1.01858 0.99606 0.82963 1.19799 0.92431 1.07631 0.88250 1.24397 0.90875 0.91498 1.08876 1.86415 1.31493 1.48414 1.69629 0.95646 0.89494 0.81521 0.72724 1.21597 0.91017 1.05469 0.98788 1.23371 0.97082 0.94703 1.01088 0.91727 0.87890 0.91767 0.89426 0.88333 0.76735 0.80990 0.90289 0.88522 0.90204 0.90289 0.76364 1.17653 1.17623 0.83252 0.86945 0.89620 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.63 10.57 -39.24 -0.41 -1.04 16 3 C 0.47 0.97 7.48 36.01 0.27 1.24 16 4 O -0.50 -2.46 15.65 -18.75 -0.29 -2.75 16 5 C -0.11 0.09 4.14 -90.96 -0.38 -0.28 16 6 H 0.12 -0.36 8.14 -51.93 -0.42 -0.79 16 7 C -0.13 0.04 7.43 -25.93 -0.19 -0.15 16 8 C 0.13 0.03 4.32 -67.12 -0.29 -0.26 16 9 H 0.11 0.22 7.46 -51.93 -0.39 -0.16 16 10 N -0.72 -0.08 5.25 -54.14 -0.28 -0.37 16 11 C 0.60 2.40 7.81 -12.59 -0.10 2.30 16 12 O -0.54 -4.41 16.57 5.26 0.09 -4.33 16 13 C -0.23 -0.72 6.29 -103.35 -0.65 -1.37 16 14 C 0.05 0.01 10.83 -16.84 -0.18 -0.18 16 15 N -0.42 -0.28 3.09 -119.90 -0.37 -0.65 16 16 C 0.07 -0.17 9.81 59.84 0.59 0.41 16 17 C 0.03 0.06 6.18 -81.86 -0.51 -0.45 16 18 C -0.05 0.05 2.86 36.01 0.10 0.15 16 19 O -0.55 1.26 10.29 -35.23 -0.36 0.90 16 20 Si 0.71 -0.79 31.22 -169.99 -5.31 -6.09 16 21 C -0.14 -0.59 9.49 -37.50 -0.36 -0.94 16 22 C -0.12 0.11 7.15 -25.92 -0.19 -0.07 16 23 H 0.06 0.00 8.13 -51.93 -0.42 -0.43 16 24 H 0.10 -0.26 8.14 -51.93 -0.42 -0.69 16 25 H 0.06 -0.01 8.14 -51.92 -0.42 -0.44 16 26 H 0.09 -0.01 8.14 -51.93 -0.42 -0.44 16 27 H 0.10 -0.01 8.09 -51.93 -0.42 -0.43 16 28 H 0.40 -1.18 7.64 -40.82 -0.31 -1.49 16 29 H 0.17 -0.68 7.45 -52.48 -0.39 -1.07 16 30 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 31 H 0.10 -0.23 6.73 -51.93 -0.35 -0.58 16 32 H 0.08 -0.34 8.13 -51.93 -0.42 -0.76 16 33 H 0.08 -0.21 7.96 -51.93 -0.41 -0.62 16 34 H 0.39 -2.73 8.74 45.56 0.40 -2.33 16 35 H -0.25 -0.75 7.11 56.52 0.40 -0.35 16 36 H -0.25 -0.47 6.89 56.52 0.39 -0.08 16 37 H 0.15 0.70 6.73 -52.48 -0.35 0.34 16 38 H 0.11 0.03 7.43 -51.93 -0.39 -0.36 16 39 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 LS Contribution 334.33 15.07 5.04 5.04 Total: 0.00 -11.79 334.33 -7.92 -19.71 By element: Atomic # 1 Polarization: -6.67 SS G_CDS: -5.21 Total: -11.88 kcal Atomic # 6 Polarization: 2.27 SS G_CDS: -0.81 Total: 1.46 kcal Atomic # 7 Polarization: -0.36 SS G_CDS: -0.65 Total: -1.01 kcal Atomic # 8 Polarization: -6.24 SS G_CDS: -0.98 Total: -7.22 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: -5.31 Total: -6.09 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -11.79 -7.92 -19.71 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_13287730.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.781 kcal (2) G-P(sol) polarization free energy of solvation -11.789 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.570 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.923 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.711 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.493 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds