Wall clock time and date at job start Sat Mar 6 2021 16:03:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34234 * 116.99938 * 2 1 4 4 O 1.20822 * 119.99973 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00068 * 179.97438 * 3 2 1 6 6 H 1.09009 * 112.84773 * 311.19965 * 5 3 2 7 7 C 1.53782 * 113.61507 * 82.49880 * 5 3 2 8 8 C 1.53779 * 87.07810 * 139.98162 * 7 5 3 9 9 H 1.09005 * 113.61979 * 220.01828 * 8 7 5 10 10 N 1.46508 * 113.69114 * 89.12977 * 8 7 5 11 11 C 1.34772 * 119.99803 * 107.46261 * 10 8 7 12 12 O 1.21548 * 120.00469 * 0.02562 * 11 10 8 13 13 C 1.47844 * 119.99879 * 180.02562 * 11 10 8 14 14 C 1.39524 * 120.55713 * 359.97438 * 13 11 10 15 15 N 1.31692 * 120.56596 * 179.97438 * 14 13 11 16 16 C 1.31928 * 121.87989 * 0.02562 * 15 14 13 17 17 C 1.38352 * 121.07904 * 359.97438 * 16 15 14 18 18 C 1.50701 * 120.34585 * 179.97438 * 17 16 15 19 19 O 1.42900 * 109.46998 * 120.00441 * 18 17 16 20 20 Si 1.86294 * 109.47257 * 0.02562 * 18 17 16 21 21 C 1.38356 * 119.30199 * 359.70865 * 17 16 15 22 22 C 1.53773 * 113.61589 * 180.02562 * 5 3 2 23 23 H 1.08999 * 109.47008 * 59.99921 * 1 2 3 24 24 H 1.09006 * 109.46832 * 179.97438 * 1 2 3 25 25 H 1.08996 * 109.47465 * 299.99911 * 1 2 3 26 26 H 1.08995 * 113.61690 * 254.53076 * 7 5 3 27 27 H 1.09002 * 113.61008 * 25.44098 * 7 5 3 28 28 H 0.97001 * 120.00093 * 287.46437 * 10 8 7 29 29 H 1.07996 * 119.71806 * 0.02562 * 14 13 11 30 30 H 1.07999 * 119.45935 * 180.02562 * 16 15 14 31 31 H 1.08997 * 109.46913 * 240.00006 * 18 17 16 32 32 H 0.96695 * 114.00182 * 300.00043 * 19 18 17 33 33 H 1.48506 * 110.00154 * 179.97438 * 20 18 17 34 34 H 1.48497 * 109.99936 * 301.31421 * 20 18 17 35 35 H 1.08004 * 120.85378 * 180.30006 * 21 17 16 36 36 H 1.08997 * 113.61339 * 334.56910 * 22 5 3 37 37 H 1.09001 * 113.61427 * 105.46959 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0233 0.6365 0.7567 7 6 4.1917 1.1232 -1.3961 8 6 5.1814 2.2266 -0.9865 9 1 5.3969 2.9380 -1.7839 10 7 6.3913 1.7197 -0.3343 11 6 7.5675 1.7332 -0.9921 12 8 7.6247 2.1664 -2.1263 13 6 8.7884 1.2211 -0.3341 14 6 8.7363 0.7217 0.9677 15 7 9.8236 0.2651 1.5538 16 6 10.9938 0.2602 0.9446 17 6 11.1288 0.7382 -0.3467 18 6 12.4737 0.7253 -1.0266 19 8 12.4014 -0.0722 -2.2101 20 14 13.7467 0.0073 0.1286 21 6 10.0151 1.2230 -1.0091 22 6 4.1077 2.7142 0.0011 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3634 0.5138 0.8899 26 1 4.6621 0.1539 -1.5610 27 1 3.5243 1.4145 -2.2073 28 1 6.3459 1.3743 0.5710 29 1 7.7961 0.7088 1.4989 30 1 11.8604 -0.1240 1.4621 31 1 12.7565 1.7440 -1.2917 32 1 12.1541 -0.9931 -2.0494 33 1 15.0774 -0.0115 -0.5304 34 1 13.8091 0.8089 1.3771 35 1 10.0910 1.5977 -2.0192 36 1 3.4174 3.4405 -0.4278 37 1 4.5104 3.0289 0.9639 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_13287814.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:03:56 Heat of formation + Delta-G solvation = -78.041886 kcal Electronic energy + Delta-G solvation = -22682.072771 eV Core-core repulsion = 19006.554993 eV Total energy + Delta-G solvation = -3675.517778 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.114 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.22712 -41.73669 -40.60223 -39.12421 -38.02173 -37.35908 -34.76542 -33.80597 -32.92368 -29.49359 -27.44758 -27.27438 -27.00494 -25.62133 -23.92444 -22.60834 -21.92867 -20.56557 -19.45281 -18.79863 -18.23495 -18.00263 -17.80623 -17.65465 -17.37985 -16.84307 -16.54389 -16.15473 -15.91414 -15.63405 -15.13521 -14.82731 -14.72433 -14.44712 -14.28719 -14.23007 -13.80351 -13.59481 -13.53905 -13.21244 -12.90498 -12.80069 -12.16498 -12.00479 -11.89146 -11.81203 -11.42739 -11.36654 -11.11350 -10.70218 -10.62670 -10.40879 -10.25580 -5.19060 -0.64789 -0.08047 1.08781 1.11785 1.47707 1.62285 1.66713 1.76854 1.86052 2.55993 2.94428 3.08560 3.17681 3.25001 3.31072 3.49851 3.53795 3.59445 3.65564 3.68697 3.91082 4.03619 4.12406 4.13606 4.21465 4.32922 4.36555 4.48200 4.54697 4.58691 4.62115 4.71518 4.77161 4.81293 4.87404 5.22289 5.31885 5.35558 6.19564 6.39396 6.56184 6.69574 6.95793 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.503 6.503 5 C -0.113 4.113 6 H 0.126 0.874 7 C -0.131 4.131 8 C 0.122 3.878 9 H 0.117 0.883 10 N -0.709 5.709 11 C 0.570 3.430 12 O -0.523 6.523 13 C -0.189 4.189 14 C 0.140 3.860 15 N -0.477 5.477 16 C 0.129 3.871 17 C -0.179 4.179 18 C -0.065 4.065 19 O -0.536 6.536 20 Si 0.689 3.311 21 C 0.013 3.987 22 C -0.124 4.124 23 H 0.064 0.936 24 H 0.103 0.897 25 H 0.064 0.936 26 H 0.088 0.912 27 H 0.100 0.900 28 H 0.402 0.598 29 H 0.161 0.839 30 H 0.163 0.837 31 H 0.121 0.879 32 H 0.381 0.619 33 H -0.248 1.248 34 H -0.253 1.253 35 H 0.153 0.847 36 H 0.114 0.886 37 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.182 -4.329 2.997 5.268 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.391 6.391 5 C -0.133 4.133 6 H 0.143 0.857 7 C -0.170 4.170 8 C 0.017 3.983 9 H 0.135 0.865 10 N -0.361 5.361 11 C 0.356 3.644 12 O -0.399 6.399 13 C -0.194 4.194 14 C -0.019 4.019 15 N -0.185 5.185 16 C -0.027 4.027 17 C -0.181 4.181 18 C -0.176 4.176 19 O -0.341 6.341 20 Si 0.590 3.410 21 C -0.014 4.014 22 C -0.162 4.162 23 H 0.083 0.917 24 H 0.122 0.878 25 H 0.083 0.917 26 H 0.107 0.893 27 H 0.119 0.881 28 H 0.238 0.762 29 H 0.178 0.822 30 H 0.180 0.820 31 H 0.138 0.862 32 H 0.228 0.772 33 H -0.173 1.173 34 H -0.177 1.177 35 H 0.171 0.829 36 H 0.132 0.868 37 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 0.485 -3.336 3.186 4.638 hybrid contribution -0.698 0.638 -0.479 1.060 sum -0.213 -2.698 2.707 3.828 Atomic orbital electron populations 1.23328 0.75905 1.04032 1.02736 1.86519 1.23762 1.33319 1.83782 1.23542 0.91644 0.81452 0.72147 1.90691 1.66961 1.36430 1.44971 1.22665 0.87765 1.01013 1.01810 0.85658 1.23400 0.97763 1.01176 0.94670 1.21838 0.83256 0.96526 0.96728 0.86519 1.45563 1.07361 1.64746 1.18475 1.17998 0.82686 0.78092 0.85614 1.90834 1.85693 1.45608 1.17728 1.20992 0.95132 1.06287 0.96994 1.23030 0.97330 0.90955 0.90576 1.67728 0.98708 1.15386 1.36640 1.22916 0.95631 0.93107 0.91068 1.21449 0.97693 1.02565 0.96422 1.25033 0.98400 1.00052 0.94108 1.86548 1.92306 1.25373 1.29867 0.94817 0.78640 0.89882 0.77688 1.21634 0.89634 0.90066 1.00033 1.23381 0.96919 0.94894 1.01049 0.91729 0.87835 0.91722 0.89297 0.88127 0.76236 0.82169 0.82003 0.86218 0.77182 1.17274 1.17747 0.82920 0.86757 0.89444 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.30 10.57 -39.27 -0.41 -0.71 16 3 C 0.47 0.48 7.48 36.01 0.27 0.75 16 4 O -0.50 -1.99 15.65 -18.75 -0.29 -2.28 16 5 C -0.11 0.25 4.14 -90.96 -0.38 -0.13 16 6 H 0.13 -0.55 8.14 -51.92 -0.42 -0.97 16 7 C -0.13 0.28 7.43 -25.92 -0.19 0.08 16 8 C 0.12 -0.22 4.32 -67.10 -0.29 -0.51 16 9 H 0.12 -0.03 7.46 -51.93 -0.39 -0.42 16 10 N -0.71 1.63 5.22 -53.94 -0.28 1.35 16 11 C 0.57 0.42 7.78 -12.33 -0.10 0.32 16 12 O -0.52 -2.43 16.02 5.32 0.09 -2.34 16 13 C -0.19 0.05 5.89 -104.82 -0.62 -0.57 16 14 C 0.14 -0.21 10.71 -17.13 -0.18 -0.39 16 15 N -0.48 0.03 10.35 -12.91 -0.13 -0.11 16 16 C 0.13 -0.15 9.84 -17.47 -0.17 -0.32 16 17 C -0.18 0.18 5.39 -104.54 -0.56 -0.38 16 18 C -0.06 0.10 2.84 36.01 0.10 0.20 16 19 O -0.54 0.48 12.77 -35.23 -0.45 0.03 16 20 Si 0.69 -1.78 29.82 -169.99 -5.07 -6.85 16 21 C 0.01 0.00 9.31 -38.87 -0.36 -0.36 16 22 C -0.12 0.30 7.15 -25.90 -0.19 0.11 16 23 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 24 H 0.10 -0.33 8.14 -51.93 -0.42 -0.76 16 25 H 0.06 -0.05 8.13 -51.93 -0.42 -0.48 16 26 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 27 H 0.10 -0.18 8.09 -51.93 -0.42 -0.60 16 28 H 0.40 -2.05 6.77 -40.82 -0.28 -2.33 16 29 H 0.16 -0.78 6.42 -52.49 -0.34 -1.11 16 30 H 0.16 -0.53 4.88 -52.49 -0.26 -0.79 16 31 H 0.12 -0.14 7.96 -51.93 -0.41 -0.56 16 32 H 0.38 -1.84 8.70 45.56 0.40 -1.44 16 33 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 34 H -0.25 0.11 7.11 56.52 0.40 0.51 16 35 H 0.15 0.17 7.74 -52.48 -0.41 -0.24 16 36 H 0.11 -0.13 7.43 -51.93 -0.39 -0.51 16 37 H 0.09 -0.30 8.14 -51.93 -0.42 -0.73 16 LS Contribution 321.74 15.07 4.85 4.85 Total: 0.00 -10.01 321.74 -7.53 -17.53 By element: Atomic # 1 Polarization: -7.09 SS G_CDS: -4.22 Total: -11.31 kcal Atomic # 6 Polarization: 1.44 SS G_CDS: -1.60 Total: -0.16 kcal Atomic # 7 Polarization: 1.66 SS G_CDS: -0.42 Total: 1.25 kcal Atomic # 8 Polarization: -4.24 SS G_CDS: -1.07 Total: -5.31 kcal Atomic # 14 Polarization: -1.78 SS G_CDS: -5.07 Total: -6.85 kcal Total LS contribution 4.85 Total: 4.85 kcal Total: -10.01 -7.53 -17.53 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_13287814.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.509 kcal (2) G-P(sol) polarization free energy of solvation -10.005 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.514 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.528 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.533 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.042 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds