Wall clock time and date at job start Sat Mar 6 2021 16:03:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34234 * 116.99938 * 2 1 4 4 O 1.20822 * 119.99973 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00068 * 179.97438 * 3 2 1 6 6 H 1.09009 * 112.84773 * 311.19965 * 5 3 2 7 7 C 1.53782 * 113.61507 * 82.49880 * 5 3 2 8 8 C 1.53779 * 87.07810 * 139.98162 * 7 5 3 9 9 H 1.09005 * 113.61979 * 220.01828 * 8 7 5 10 10 N 1.46508 * 113.69114 * 89.12977 * 8 7 5 11 11 C 1.34772 * 119.99803 * 107.46261 * 10 8 7 12 12 O 1.21548 * 120.00469 * 0.02562 * 11 10 8 13 13 C 1.47844 * 119.99879 * 180.02562 * 11 10 8 14 14 C 1.39524 * 120.55713 * 359.97438 * 13 11 10 15 15 N 1.31692 * 120.56596 * 179.97438 * 14 13 11 16 16 C 1.31928 * 121.87989 * 0.02562 * 15 14 13 17 17 C 1.38352 * 121.07904 * 359.97438 * 16 15 14 18 18 C 1.50701 * 120.34585 * 179.97438 * 17 16 15 19 19 O 1.42900 * 109.46998 * 120.00441 * 18 17 16 20 20 Si 1.86294 * 109.47257 * 0.02562 * 18 17 16 21 21 C 1.38356 * 119.30199 * 359.70865 * 17 16 15 22 22 C 1.53773 * 113.61589 * 180.02562 * 5 3 2 23 23 H 1.08999 * 109.47008 * 59.99921 * 1 2 3 24 24 H 1.09006 * 109.46832 * 179.97438 * 1 2 3 25 25 H 1.08996 * 109.47465 * 299.99911 * 1 2 3 26 26 H 1.08995 * 113.61690 * 254.53076 * 7 5 3 27 27 H 1.09002 * 113.61008 * 25.44098 * 7 5 3 28 28 H 0.97001 * 120.00093 * 287.46437 * 10 8 7 29 29 H 1.07996 * 119.71806 * 0.02562 * 14 13 11 30 30 H 1.07999 * 119.45935 * 180.02562 * 16 15 14 31 31 H 1.08997 * 109.46913 * 240.00006 * 18 17 16 32 32 H 0.96695 * 114.00182 * 300.00043 * 19 18 17 33 33 H 1.48506 * 110.00154 * 179.97438 * 20 18 17 34 34 H 1.48497 * 109.99936 * 301.31421 * 20 18 17 35 35 H 1.08004 * 120.85378 * 180.30006 * 21 17 16 36 36 H 1.08997 * 113.61339 * 334.56910 * 22 5 3 37 37 H 1.09001 * 113.61427 * 105.46959 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0233 0.6365 0.7567 7 6 4.1917 1.1232 -1.3961 8 6 5.1814 2.2266 -0.9865 9 1 5.3969 2.9380 -1.7839 10 7 6.3913 1.7197 -0.3343 11 6 7.5675 1.7332 -0.9921 12 8 7.6247 2.1664 -2.1263 13 6 8.7884 1.2211 -0.3341 14 6 8.7363 0.7217 0.9677 15 7 9.8236 0.2651 1.5538 16 6 10.9938 0.2602 0.9446 17 6 11.1288 0.7382 -0.3467 18 6 12.4737 0.7253 -1.0266 19 8 12.4014 -0.0722 -2.2101 20 14 13.7467 0.0073 0.1286 21 6 10.0151 1.2230 -1.0091 22 6 4.1077 2.7142 0.0011 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3634 0.5138 0.8899 26 1 4.6621 0.1539 -1.5610 27 1 3.5243 1.4145 -2.2073 28 1 6.3459 1.3743 0.5710 29 1 7.7961 0.7088 1.4989 30 1 11.8604 -0.1240 1.4621 31 1 12.7565 1.7440 -1.2917 32 1 12.1541 -0.9931 -2.0494 33 1 15.0774 -0.0115 -0.5304 34 1 13.8091 0.8089 1.3771 35 1 10.0910 1.5977 -2.0192 36 1 3.4174 3.4405 -0.4278 37 1 4.5104 3.0289 0.9639 There are 53 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 53 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12121848_13287814.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:03:56 Heat of formation + Delta-G solvation = -80.784992 kcal Electronic energy + Delta-G solvation = -22682.191721 eV Core-core repulsion = 19006.554993 eV Total energy + Delta-G solvation = -3675.636728 eV No. of doubly occupied orbitals = 53 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.114 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.19731 -41.71456 -40.59530 -39.12285 -37.92478 -37.45586 -34.76550 -33.74598 -32.83365 -29.44410 -27.35764 -27.18465 -26.85476 -25.56493 -23.84982 -22.59379 -21.89238 -20.49877 -19.39710 -18.78647 -18.15805 -17.95490 -17.74069 -17.61612 -17.39455 -16.75579 -16.49068 -16.13629 -15.88097 -15.51375 -15.10456 -14.77368 -14.65389 -14.39577 -14.27791 -14.19159 -13.72391 -13.49844 -13.45309 -13.14645 -12.86583 -12.71247 -12.15583 -11.88519 -11.84051 -11.77597 -11.48930 -11.39241 -11.08438 -10.61896 -10.57656 -10.34664 -10.15169 -5.01430 -0.57346 -0.01941 1.06706 1.23659 1.60943 1.63823 1.72695 1.84224 1.98115 2.63274 3.11193 3.21398 3.31047 3.38497 3.44536 3.63708 3.67147 3.72682 3.74503 3.78536 4.06248 4.11847 4.25960 4.27106 4.28548 4.46577 4.47946 4.62798 4.67576 4.69641 4.77293 4.84527 4.88091 4.93143 4.98534 5.32421 5.34833 5.41531 6.32194 6.65266 6.65475 6.71811 7.00794 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.467 3.533 4 O -0.539 6.539 5 C -0.105 4.105 6 H 0.156 0.844 7 C -0.128 4.128 8 C 0.122 3.878 9 H 0.097 0.903 10 N -0.690 5.690 11 C 0.570 3.430 12 O -0.571 6.571 13 C -0.196 4.196 14 C 0.148 3.852 15 N -0.493 5.493 16 C 0.130 3.870 17 C -0.177 4.177 18 C -0.074 4.074 19 O -0.554 6.554 20 Si 0.784 3.216 21 C -0.002 4.002 22 C -0.118 4.118 23 H 0.059 0.941 24 H 0.128 0.872 25 H 0.061 0.939 26 H 0.094 0.906 27 H 0.093 0.907 28 H 0.419 0.581 29 H 0.195 0.805 30 H 0.183 0.817 31 H 0.111 0.889 32 H 0.397 0.603 33 H -0.297 1.297 34 H -0.276 1.276 35 H 0.136 0.864 36 H 0.099 0.901 37 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.230 -5.544 4.643 7.235 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.312 3.688 4 O -0.429 6.429 5 C -0.124 4.124 6 H 0.174 0.826 7 C -0.167 4.167 8 C 0.016 3.984 9 H 0.115 0.885 10 N -0.343 5.343 11 C 0.358 3.642 12 O -0.450 6.450 13 C -0.201 4.201 14 C -0.010 4.010 15 N -0.201 5.201 16 C -0.026 4.026 17 C -0.179 4.179 18 C -0.183 4.183 19 O -0.362 6.362 20 Si 0.688 3.312 21 C -0.028 4.028 22 C -0.156 4.156 23 H 0.078 0.922 24 H 0.146 0.854 25 H 0.080 0.920 26 H 0.113 0.887 27 H 0.111 0.889 28 H 0.258 0.742 29 H 0.212 0.788 30 H 0.199 0.801 31 H 0.129 0.871 32 H 0.247 0.753 33 H -0.224 1.224 34 H -0.202 1.202 35 H 0.154 0.846 36 H 0.117 0.883 37 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges 0.390 -4.587 4.861 6.696 hybrid contribution -0.695 1.019 -1.028 1.606 sum -0.305 -3.569 3.833 5.246 Atomic orbital electron populations 1.23514 0.75189 1.05558 1.02383 1.86522 1.24642 1.33244 1.83478 1.24158 0.92758 0.80958 0.70924 1.90677 1.67978 1.37493 1.46739 1.22818 0.85685 1.01542 1.02358 0.82620 1.23361 0.97399 1.01184 0.94724 1.21748 0.83428 0.96499 0.96686 0.88469 1.45392 1.06313 1.63608 1.18939 1.18180 0.83549 0.77448 0.85068 1.90815 1.86397 1.47984 1.19851 1.20949 0.94416 1.07064 0.97673 1.23491 0.98294 0.89361 0.89843 1.67814 0.99245 1.16042 1.36987 1.23221 0.96165 0.92389 0.90803 1.21435 0.97381 1.02509 0.96565 1.25233 0.98793 0.99963 0.94353 1.86509 1.92419 1.26796 1.30521 0.93739 0.74752 0.88011 0.74652 1.21637 0.90700 0.90785 0.99709 1.23306 0.96093 0.94663 1.01501 0.92244 0.85414 0.91980 0.88725 0.88864 0.74228 0.78826 0.80062 0.87146 0.75287 1.22435 1.20206 0.84622 0.88255 0.87648 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.15 16 2 O -0.36 -0.47 10.57 -51.46 -0.54 -1.02 16 3 C 0.47 0.93 7.48 71.24 0.53 1.46 16 4 O -0.54 -4.69 15.65 21.98 0.34 -4.35 16 5 C -0.11 0.57 4.14 -11.02 -0.05 0.53 16 6 H 0.16 -1.79 8.14 -2.38 -0.02 -1.81 16 7 C -0.13 0.55 7.43 31.12 0.23 0.79 16 8 C 0.12 -0.43 4.32 45.53 0.20 -0.23 16 9 H 0.10 0.11 7.46 -2.38 -0.02 0.09 16 10 N -0.69 3.72 5.22 -442.84 -2.31 1.41 16 11 C 0.57 1.08 7.78 86.79 0.68 1.76 16 12 O -0.57 -6.36 16.02 -3.87 -0.06 -6.42 16 13 C -0.20 0.10 5.89 -19.99 -0.12 -0.02 16 14 C 0.15 -0.68 10.71 85.02 0.91 0.23 16 15 N -0.49 0.82 10.35 -194.76 -2.01 -1.20 16 16 C 0.13 -0.43 9.84 84.71 0.83 0.40 16 17 C -0.18 0.34 5.39 -19.81 -0.11 0.23 16 18 C -0.07 0.20 2.84 71.24 0.20 0.40 16 19 O -0.55 0.67 12.77 -148.98 -1.90 -1.23 16 20 Si 0.78 -4.24 29.82 68.60 2.05 -2.19 16 21 C 0.00 0.00 9.31 22.73 0.21 0.21 16 22 C -0.12 0.61 7.15 31.13 0.22 0.83 16 23 H 0.06 -0.05 8.13 -2.39 -0.02 -0.07 16 24 H 0.13 -0.93 8.14 -2.38 -0.02 -0.95 16 25 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 26 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 27 H 0.09 -0.25 8.09 -2.39 -0.02 -0.27 16 28 H 0.42 -5.22 6.77 -92.71 -0.63 -5.85 16 29 H 0.20 -2.45 6.42 -2.91 -0.02 -2.47 16 30 H 0.18 -1.48 4.88 -2.91 -0.01 -1.49 16 31 H 0.11 -0.13 7.96 -2.39 -0.02 -0.15 16 32 H 0.40 -3.83 8.70 -74.06 -0.64 -4.47 16 33 H -0.30 -0.80 7.11 99.48 0.71 -0.09 16 34 H -0.28 0.43 7.11 99.48 0.71 1.14 16 35 H 0.14 0.63 7.74 -2.91 -0.02 0.61 16 36 H 0.10 -0.14 7.43 -2.39 -0.02 -0.16 16 37 H 0.11 -0.91 8.14 -2.39 -0.02 -0.93 16 Total: 0.00 -25.16 321.74 0.39 -24.77 By element: Atomic # 1 Polarization: -17.40 SS G_CDS: -0.10 Total: -17.50 kcal Atomic # 6 Polarization: 2.79 SS G_CDS: 4.94 Total: 7.73 kcal Atomic # 7 Polarization: 4.54 SS G_CDS: -4.33 Total: 0.21 kcal Atomic # 8 Polarization: -10.85 SS G_CDS: -2.16 Total: -13.02 kcal Atomic # 14 Polarization: -4.24 SS G_CDS: 2.05 Total: -2.19 kcal Total: -25.16 0.39 -24.77 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_13287814.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.018 kcal (2) G-P(sol) polarization free energy of solvation -25.161 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.179 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.394 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.767 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.785 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds