Wall clock time and date at job start Sat Mar 6 2021 16:03:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34229 * 117.00011 * 2 1 4 4 O 1.20824 * 120.00122 * 0.02562 * 3 2 1 5 5 C 1.50704 * 120.00114 * 180.02562 * 3 2 1 6 6 H 1.09003 * 112.84946 * 311.19925 * 5 3 2 7 7 C 1.53777 * 113.61230 * 82.50566 * 5 3 2 8 8 C 1.53775 * 87.07985 * 139.98063 * 7 5 3 9 9 H 1.08997 * 113.69477 * 220.00733 * 8 7 5 10 10 N 1.46506 * 113.61614 * 89.11678 * 8 7 5 11 11 C 1.34774 * 120.00048 * 107.49634 * 10 8 7 12 12 O 1.21611 * 120.00142 * 0.02562 * 11 10 8 13 13 C 1.47376 * 120.00121 * 180.02562 * 11 10 8 14 14 C 1.36418 * 127.19552 * 179.97438 * 13 11 10 15 15 C 1.50693 * 125.79835 * 0.02562 * 14 13 11 16 16 O 1.33654 * 108.39683 * 179.80752 * 14 13 11 17 17 C 1.34220 * 110.90714 * 0.39232 * 16 14 13 18 18 C 1.50694 * 125.43283 * 179.87509 * 17 16 14 19 19 O 1.42901 * 109.47118 * 244.68572 * 18 17 16 20 20 Si 1.86298 * 109.47775 * 4.68816 * 18 17 16 21 21 C 1.34168 * 109.12501 * 359.60493 * 17 16 14 22 22 C 1.53772 * 113.61542 * 180.02562 * 5 3 2 23 23 H 1.08995 * 109.47223 * 59.99470 * 1 2 3 24 24 H 1.09003 * 109.46619 * 179.97438 * 1 2 3 25 25 H 1.08997 * 109.47073 * 299.99201 * 1 2 3 26 26 H 1.09002 * 113.61640 * 25.43531 * 7 5 3 27 27 H 1.09002 * 113.61898 * 254.53223 * 7 5 3 28 28 H 0.97000 * 119.99728 * 287.51003 * 10 8 7 29 29 H 1.08998 * 109.47539 * 89.99742 * 15 14 13 30 30 H 1.08999 * 109.46936 * 209.99920 * 15 14 13 31 31 H 1.08999 * 109.47087 * 329.99357 * 15 14 13 32 32 H 1.09004 * 109.47407 * 124.68928 * 18 17 16 33 33 H 0.96708 * 114.00246 * 180.02562 * 19 18 17 34 34 H 1.48506 * 109.99834 * 300.00486 * 20 18 17 35 35 H 1.48502 * 110.00011 * 61.31751 * 20 18 17 36 36 H 1.08004 * 127.02549 * 180.25026 * 21 17 16 37 37 H 1.09001 * 113.61955 * 105.47151 * 22 5 3 38 38 H 1.09005 * 113.61584 * 334.56768 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2749 -0.0006 6 1 4.0240 0.6362 0.7549 7 6 4.1905 1.1239 -1.3979 8 6 5.1806 2.2271 -0.9886 9 1 5.3964 2.9394 -1.7849 10 7 6.3903 1.7180 -0.3376 11 6 7.5663 1.7313 -0.9958 12 8 7.6234 2.1663 -2.1300 13 6 8.7831 1.2187 -0.3411 14 6 10.0407 1.1621 -0.8665 15 6 10.4418 1.6211 -2.2447 16 8 10.8576 0.6347 0.0505 17 6 10.1854 0.3282 1.1711 18 6 10.7856 -0.2853 2.4097 19 8 10.2305 -1.5862 2.6139 20 14 12.6318 -0.4236 2.2024 21 6 8.8950 0.6606 1.0145 22 6 4.1078 2.7142 0.0001 23 1 -0.3633 0.5139 -0.8899 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3633 0.5137 0.8900 26 1 3.5225 1.4155 -2.2083 27 1 4.6608 0.1546 -1.5637 28 1 6.3448 1.3712 0.5672 29 1 10.7352 2.6702 -2.2072 30 1 11.2809 1.0215 -2.5974 31 1 9.5994 1.5035 -2.9262 32 1 10.5629 0.3440 3.2715 33 1 10.5719 -2.0413 3.3959 34 1 12.9487 -1.2792 1.0307 35 1 13.2250 0.9257 2.0211 36 1 8.1007 0.5427 1.7368 37 1 4.5113 3.0285 0.9627 38 1 3.4171 3.4407 -0.4280 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_13308374.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:03:59 Heat of formation + Delta-G solvation = -103.914388 kcal Electronic energy + Delta-G solvation = -23608.910103 eV Core-core repulsion = 19807.240268 eV Total energy + Delta-G solvation = -3801.669835 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.118 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -43.78176 -41.97841 -40.69307 -39.05809 -38.03448 -37.31543 -34.63285 -33.87765 -33.16569 -29.72466 -29.28394 -27.20042 -26.93463 -25.73969 -24.27994 -22.72725 -22.10944 -20.85133 -20.26054 -18.98513 -18.78570 -18.34308 -17.80823 -17.37355 -17.31006 -17.01882 -16.92160 -15.97666 -15.89376 -15.79931 -15.29972 -15.00655 -14.72766 -14.25901 -14.23283 -14.12348 -14.09130 -13.93415 -13.70880 -13.48277 -13.17579 -13.12876 -12.84847 -12.59618 -12.12409 -11.92902 -11.82330 -11.78018 -11.31499 -11.03200 -10.90925 -10.58145 -10.17200 -9.58661 -5.16115 0.25734 0.78624 1.06813 1.15851 1.45615 1.60849 1.70806 1.96474 2.03891 2.29348 3.14336 3.15731 3.24921 3.47743 3.57615 3.68258 3.69669 3.72555 3.96247 4.05951 4.13743 4.16100 4.23884 4.36658 4.40379 4.51465 4.53706 4.58259 4.59618 4.66410 4.69216 4.78555 4.78753 4.92729 5.08294 5.18478 5.38829 5.45653 5.89644 6.37244 6.41916 6.73380 7.17452 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.504 6.504 5 C -0.113 4.113 6 H 0.125 0.875 7 C -0.132 4.132 8 C 0.124 3.876 9 H 0.116 0.884 10 N -0.708 5.708 11 C 0.599 3.401 12 O -0.535 6.535 13 C -0.253 4.253 14 C 0.097 3.903 15 C -0.087 4.087 16 O -0.175 6.175 17 C -0.013 4.013 18 C -0.035 4.035 19 O -0.543 6.543 20 Si 0.708 3.292 21 C -0.142 4.142 22 C -0.124 4.124 23 H 0.064 0.936 24 H 0.103 0.897 25 H 0.064 0.936 26 H 0.099 0.901 27 H 0.088 0.912 28 H 0.402 0.598 29 H 0.093 0.907 30 H 0.080 0.920 31 H 0.113 0.887 32 H 0.096 0.904 33 H 0.391 0.609 34 H -0.249 1.249 35 H -0.252 1.252 36 H 0.160 0.840 37 H 0.086 0.914 38 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.891 -2.766 5.414 6.367 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.313 3.687 4 O -0.391 6.391 5 C -0.132 4.132 6 H 0.143 0.857 7 C -0.171 4.171 8 C 0.018 3.982 9 H 0.134 0.866 10 N -0.359 5.359 11 C 0.388 3.612 12 O -0.413 6.413 13 C -0.257 4.257 14 C 0.044 3.956 15 C -0.143 4.143 16 O -0.073 6.073 17 C -0.061 4.061 18 C -0.145 4.145 19 O -0.351 6.351 20 Si 0.607 3.393 21 C -0.162 4.162 22 C -0.162 4.162 23 H 0.083 0.917 24 H 0.121 0.879 25 H 0.083 0.917 26 H 0.118 0.882 27 H 0.106 0.894 28 H 0.237 0.763 29 H 0.111 0.889 30 H 0.099 0.901 31 H 0.132 0.868 32 H 0.113 0.887 33 H 0.240 0.760 34 H -0.173 1.173 35 H -0.177 1.177 36 H 0.178 0.822 37 H 0.104 0.896 38 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 2.359 -1.902 3.505 4.634 hybrid contribution -1.120 -0.027 0.592 1.267 sum 1.239 -1.930 4.097 4.695 Atomic orbital electron populations 1.23323 0.75961 1.04002 1.02716 1.86523 1.23722 1.33351 1.83787 1.23563 0.91657 0.81426 0.72088 1.90686 1.66971 1.36422 1.45039 1.22656 0.87651 1.01050 1.01854 0.85744 1.23404 0.97839 1.01281 0.94561 1.21795 0.83380 0.96367 0.96641 0.86610 1.45435 1.07168 1.64761 1.18554 1.17106 0.81934 0.77246 0.84932 1.90785 1.85844 1.46790 1.17843 1.21065 0.94387 1.13803 0.96480 1.22954 0.87452 0.93909 0.91312 1.20722 1.04556 1.02142 0.86887 1.83703 1.39250 1.62822 1.21519 1.21049 0.91465 1.05664 0.87911 1.23790 1.10913 0.87135 0.92636 1.86462 1.69307 1.27747 1.51584 0.95255 0.73890 0.83176 0.86940 1.22536 0.96265 1.01541 0.95828 1.23375 0.96994 0.94810 1.01061 0.91739 0.87863 0.91739 0.88224 0.89382 0.76262 0.88856 0.90072 0.86839 0.88669 0.75980 1.17299 1.17696 0.82216 0.89559 0.86841 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.57 10.57 -39.26 -0.41 -0.99 16 3 C 0.47 0.88 7.48 36.01 0.27 1.15 16 4 O -0.50 -2.34 15.65 -18.75 -0.29 -2.63 16 5 C -0.11 0.12 4.14 -90.96 -0.38 -0.26 16 6 H 0.12 -0.36 8.14 -51.93 -0.42 -0.78 16 7 C -0.13 0.11 7.43 -25.92 -0.19 -0.08 16 8 C 0.12 -0.06 4.33 -67.10 -0.29 -0.35 16 9 H 0.12 0.10 7.46 -51.93 -0.39 -0.29 16 10 N -0.71 0.17 5.26 -54.09 -0.28 -0.11 16 11 C 0.60 1.68 7.81 -12.54 -0.10 1.58 16 12 O -0.53 -2.92 14.44 5.27 0.08 -2.85 16 13 C -0.25 -0.67 6.31 -103.27 -0.65 -1.33 16 14 C 0.10 0.30 7.37 -34.97 -0.26 0.04 16 15 C -0.09 -0.08 9.89 36.00 0.36 0.27 16 16 O -0.18 -0.63 8.90 7.64 0.07 -0.56 16 17 C -0.01 -0.03 6.22 -35.74 -0.22 -0.25 16 18 C -0.04 0.04 2.96 36.00 0.11 0.15 16 19 O -0.54 0.72 12.86 -35.23 -0.45 0.27 16 20 Si 0.71 -1.06 32.09 -169.99 -5.46 -6.52 16 21 C -0.14 -0.17 10.48 -37.45 -0.39 -0.57 16 22 C -0.12 0.16 7.15 -25.91 -0.19 -0.03 16 23 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 24 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 25 H 0.06 -0.02 8.13 -51.93 -0.42 -0.45 16 26 H 0.10 -0.08 8.09 -51.93 -0.42 -0.50 16 27 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 28 H 0.40 -1.02 7.87 -40.82 -0.32 -1.34 16 29 H 0.09 0.00 8.14 -51.93 -0.42 -0.43 16 30 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.11 0.20 6.48 -51.93 -0.34 -0.13 16 32 H 0.10 -0.36 7.96 -51.93 -0.41 -0.77 16 33 H 0.39 -2.63 8.74 45.56 0.40 -2.23 16 34 H -0.25 -0.62 7.11 56.52 0.40 -0.22 16 35 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 36 H 0.16 -0.25 7.74 -52.48 -0.41 -0.66 16 37 H 0.09 -0.19 8.14 -51.93 -0.42 -0.62 16 38 H 0.11 -0.02 7.43 -51.93 -0.39 -0.41 16 LS Contribution 333.02 15.07 5.02 5.02 Total: 0.00 -10.40 333.02 -7.46 -17.86 By element: Atomic # 1 Polarization: -6.01 SS G_CDS: -4.85 Total: -10.86 kcal Atomic # 6 Polarization: 2.24 SS G_CDS: -0.87 Total: 1.37 kcal Atomic # 7 Polarization: 0.17 SS G_CDS: -0.28 Total: -0.11 kcal Atomic # 8 Polarization: -5.74 SS G_CDS: -1.02 Total: -6.76 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.46 Total: -6.52 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -10.40 -7.46 -17.86 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_13308374.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.059 kcal (2) G-P(sol) polarization free energy of solvation -10.398 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.456 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.458 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.856 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.914 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds