Wall clock time and date at job start Sat Mar 6 2021 16:04:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45192 * 1 3 3 C 1.34233 * 117.00369 * 2 1 4 4 O 1.20822 * 119.99583 * 359.97438 * 3 2 1 5 5 C 1.50700 * 120.00053 * 179.97438 * 3 2 1 6 6 H 1.08993 * 112.91004 * 311.24954 * 5 3 2 7 7 C 1.53962 * 113.66521 * 82.55365 * 5 3 2 8 8 C 1.53782 * 87.11063 * 139.88647 * 7 5 3 9 9 H 1.09001 * 113.61250 * 220.08565 * 8 7 5 10 10 N 1.46501 * 113.61142 * 89.18830 * 8 7 5 11 11 C 1.34769 * 120.00014 * 107.50467 * 10 8 7 12 12 O 1.21594 * 120.00013 * 359.97438 * 11 10 8 13 13 C 1.47542 * 120.00264 * 179.97438 * 11 10 8 14 14 C 1.40128 * 120.19335 * 179.72213 * 13 11 10 15 15 O 1.35657 * 120.15375 * 359.97438 * 14 13 11 16 16 C 1.38714 * 119.69995 * 179.79020 * 14 13 11 17 17 C 1.50697 * 119.95826 * 180.20298 * 16 14 13 18 18 O 1.42902 * 109.47452 * 285.27902 * 17 16 14 19 19 Si 1.86299 * 109.47000 * 165.27746 * 17 16 14 20 20 C 1.38055 * 120.08213 * 0.48522 * 16 14 13 21 21 C 1.38544 * 120.38695 * 359.74245 * 20 16 14 22 22 C 1.50706 * 119.84870 * 180.02562 * 21 20 16 23 23 C 1.37787 * 120.30739 * 0.02562 * 21 20 16 24 24 C 1.53781 * 87.08260 * 334.63747 * 8 7 5 25 25 H 1.09001 * 109.47107 * 300.00189 * 1 2 3 26 26 H 1.09006 * 109.46965 * 60.00398 * 1 2 3 27 27 H 1.08998 * 109.47542 * 179.97438 * 1 2 3 28 28 H 1.08997 * 113.53543 * 25.33321 * 7 5 3 29 29 H 1.08998 * 113.73879 * 254.46919 * 7 5 3 30 30 H 0.97001 * 119.99973 * 287.49325 * 10 8 7 31 31 H 0.96696 * 114.00379 * 89.99501 * 15 14 13 32 32 H 1.09002 * 109.47406 * 45.28002 * 17 16 14 33 33 H 0.96703 * 113.99666 * 180.02562 * 18 17 16 34 34 H 1.48500 * 110.00124 * 298.68550 * 19 17 16 35 35 H 1.48501 * 109.99743 * 60.00123 * 19 17 16 36 36 H 1.07997 * 119.80420 * 179.72300 * 20 16 14 37 37 H 1.08998 * 109.47124 * 270.02544 * 22 21 20 38 38 H 1.09002 * 109.46887 * 30.02414 * 22 21 20 39 39 H 1.08995 * 109.47423 * 150.02297 * 22 21 20 40 40 H 1.07994 * 120.04778 * 179.97438 * 23 21 20 41 41 H 1.09002 * 113.61445 * 139.98212 * 24 8 7 42 42 H 1.09002 * 113.61408 * 270.79943 * 24 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 1 4.0244 0.6361 0.7557 7 6 4.1936 1.1243 -1.3974 8 6 5.1817 2.2291 -0.9876 9 1 5.3955 2.9413 -1.7846 10 7 6.3921 1.7218 -0.3364 11 6 7.5682 1.7374 -0.9943 12 8 7.6246 2.1720 -2.1285 13 6 8.7872 1.2270 -0.3384 14 6 10.0111 1.2359 -1.0208 15 8 10.0809 1.7135 -2.2886 16 6 11.1517 0.7576 -0.3927 17 6 12.4717 0.7687 -1.1196 18 8 12.4869 -0.2748 -2.0957 19 14 13.8542 0.4987 0.0997 20 6 11.0779 0.2661 0.8952 21 6 9.8689 0.2512 1.5715 22 6 9.8023 -0.2875 2.9774 23 6 8.7268 0.7268 0.9647 24 6 4.1078 2.7142 0.0005 25 1 -0.3633 0.5139 0.8900 26 1 -0.3633 0.5138 -0.8901 27 1 -0.3634 -1.0276 -0.0005 28 1 3.5253 1.4149 -2.2079 29 1 4.6657 0.1562 -1.5646 30 1 6.3470 1.3749 0.5683 31 1 10.2702 2.6603 -2.3424 32 1 12.6062 1.7308 -1.6141 33 1 13.3088 -0.3272 -2.6026 34 1 13.8690 1.5947 1.1017 35 1 13.6824 -0.8097 0.7807 36 1 11.9679 -0.1093 1.3783 37 1 9.5919 -1.3566 2.9472 38 1 10.7566 -0.1190 3.4766 39 1 9.0106 0.2233 3.5252 40 1 7.7865 0.7128 1.4956 41 1 4.5105 3.0293 0.9631 42 1 3.4169 3.4406 -0.4275 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_13422088.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:04:07 Heat of formation + Delta-G solvation = -131.986974 kcal Electronic energy + Delta-G solvation = -27109.757254 eV Core-core repulsion = 23023.106341 eV Total energy + Delta-G solvation = -4086.650913 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.134 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -42.11829 -41.57876 -40.39425 -38.95287 -38.04490 -37.53855 -37.30436 -34.56508 -33.25207 -32.66906 -29.44460 -27.73866 -27.19108 -26.94583 -26.79398 -25.09215 -22.56040 -21.87274 -21.68288 -20.48078 -19.50235 -18.97174 -18.43792 -18.24473 -17.77108 -17.66135 -17.36209 -16.75830 -16.69548 -16.01262 -15.94463 -15.53341 -15.28486 -15.10826 -14.84018 -14.76626 -14.66485 -14.30071 -14.23294 -13.79608 -13.72343 -13.50356 -13.24479 -13.17816 -13.04396 -12.87135 -12.74899 -12.45696 -12.00457 -11.94415 -11.84538 -11.79442 -11.67717 -11.33153 -10.83071 -10.31933 -10.27085 -10.10822 -9.58623 -5.06398 -0.40547 -0.00201 1.14030 1.17902 1.54068 1.68294 1.70710 1.85035 1.93477 2.50477 3.09011 3.13652 3.21978 3.26814 3.44597 3.51756 3.60923 3.67402 3.77977 3.92985 3.94712 4.01562 4.14987 4.17666 4.22827 4.30610 4.38194 4.48202 4.51836 4.52718 4.57924 4.60370 4.66323 4.69484 4.77923 4.84684 4.88951 4.90327 5.10911 5.23642 5.37445 5.41566 5.50428 6.35605 6.62879 6.71807 6.72749 7.15370 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.470 3.530 4 O -0.504 6.504 5 C -0.113 4.113 6 H 0.124 0.876 7 C -0.132 4.132 8 C 0.124 3.876 9 H 0.116 0.884 10 N -0.713 5.713 11 C 0.565 3.435 12 O -0.512 6.512 13 C -0.164 4.164 14 C 0.194 3.806 15 O -0.465 6.465 16 C -0.108 4.108 17 C -0.063 4.063 18 O -0.538 6.538 19 Si 0.684 3.316 20 C -0.081 4.081 21 C -0.097 4.097 22 C -0.117 4.117 23 C -0.066 4.066 24 C -0.124 4.124 25 H 0.064 0.936 26 H 0.064 0.936 27 H 0.103 0.897 28 H 0.099 0.901 29 H 0.088 0.912 30 H 0.400 0.600 31 H 0.394 0.606 32 H 0.072 0.928 33 H 0.382 0.618 34 H -0.253 1.253 35 H -0.249 1.249 36 H 0.130 0.870 37 H 0.077 0.923 38 H 0.069 0.931 39 H 0.073 0.927 40 H 0.133 0.867 41 H 0.085 0.915 42 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.349 -0.767 3.888 5.189 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.313 3.687 4 O -0.391 6.391 5 C -0.133 4.133 6 H 0.142 0.858 7 C -0.171 4.171 8 C 0.018 3.982 9 H 0.134 0.866 10 N -0.366 5.366 11 C 0.352 3.648 12 O -0.387 6.387 13 C -0.168 4.168 14 C 0.147 3.853 15 O -0.275 6.275 16 C -0.109 4.109 17 C -0.174 4.174 18 O -0.344 6.344 19 Si 0.585 3.415 20 C -0.098 4.098 21 C -0.097 4.097 22 C -0.173 4.173 23 C -0.085 4.085 24 C -0.162 4.162 25 H 0.083 0.917 26 H 0.083 0.917 27 H 0.121 0.879 28 H 0.118 0.882 29 H 0.106 0.894 30 H 0.235 0.765 31 H 0.252 0.748 32 H 0.090 0.910 33 H 0.229 0.771 34 H -0.178 1.178 35 H -0.174 1.174 36 H 0.147 0.853 37 H 0.095 0.905 38 H 0.088 0.912 39 H 0.092 0.908 40 H 0.151 0.849 41 H 0.104 0.896 42 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 2.646 -0.940 3.967 4.860 hybrid contribution -0.836 0.358 0.534 1.055 sum 1.810 -0.582 4.501 4.886 Atomic orbital electron populations 1.23325 0.75938 1.04016 1.02724 1.86520 1.23741 1.33347 1.83785 1.23546 0.91637 0.81434 0.72107 1.90686 1.66958 1.36424 1.45021 1.22681 0.87680 1.01017 1.01873 0.85798 1.23438 0.97815 1.01312 0.94526 1.21777 0.83345 0.96414 0.96619 0.86613 1.45582 1.07358 1.65141 1.18529 1.17978 0.82675 0.78415 0.85684 1.90846 1.85618 1.44993 1.17213 1.20332 0.94242 1.06862 0.95347 1.18186 0.89708 0.93903 0.83515 1.84811 1.93359 1.28783 1.20593 1.19730 0.94185 1.02811 0.94137 1.24517 1.00463 0.93961 0.98426 1.86553 1.42771 1.52410 1.52681 0.95093 0.85678 0.80804 0.79902 1.21023 0.97900 0.97105 0.93813 1.19769 0.92468 1.00045 0.97413 1.20839 1.03405 1.01615 0.91477 1.21109 0.98394 0.96065 0.92949 1.23368 0.97010 0.94817 1.01024 0.91741 0.91722 0.87852 0.88218 0.89356 0.76458 0.74814 0.90960 0.77082 1.17779 1.17378 0.85291 0.90452 0.91200 0.90819 0.84938 0.89595 0.86826 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.54 10.56 -39.27 -0.41 -0.96 16 3 C 0.47 0.82 7.49 36.01 0.27 1.09 16 4 O -0.50 -2.28 15.65 -18.75 -0.29 -2.57 16 5 C -0.11 0.14 4.15 -90.86 -0.38 -0.24 16 6 H 0.12 -0.40 8.14 -51.93 -0.42 -0.83 16 7 C -0.13 0.11 7.44 -25.82 -0.19 -0.09 16 8 C 0.12 -0.07 4.32 -67.12 -0.29 -0.36 16 9 H 0.12 0.10 7.47 -51.93 -0.39 -0.29 16 10 N -0.71 0.50 5.21 -54.05 -0.28 0.21 16 11 C 0.57 1.50 7.76 -12.47 -0.10 1.40 16 12 O -0.51 -3.14 14.76 -16.59 -0.24 -3.39 16 13 C -0.16 -0.33 5.89 -104.85 -0.62 -0.95 16 14 C 0.19 0.61 6.69 -38.70 -0.26 0.35 16 15 O -0.46 -1.68 10.91 -40.55 -0.44 -2.12 16 16 C -0.11 -0.24 5.30 -104.51 -0.55 -0.80 16 17 C -0.06 -0.01 2.36 36.00 0.09 0.07 16 18 O -0.54 -0.69 12.86 -35.23 -0.45 -1.15 16 19 Si 0.68 -1.05 30.19 -169.99 -5.13 -6.18 16 20 C -0.08 -0.12 8.30 -39.54 -0.33 -0.44 16 21 C -0.10 -0.01 5.87 -104.67 -0.61 -0.62 16 22 C -0.12 0.26 10.00 36.01 0.36 0.62 16 23 C -0.07 0.03 9.18 -39.20 -0.36 -0.33 16 24 C -0.12 0.19 7.15 -25.92 -0.19 0.00 16 25 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 26 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 27 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 28 H 0.10 -0.06 8.09 -51.93 -0.42 -0.48 16 29 H 0.09 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.40 -1.36 6.73 -40.82 -0.27 -1.63 16 31 H 0.39 -0.13 9.06 45.56 0.41 0.28 16 32 H 0.07 -0.10 7.84 -51.93 -0.41 -0.51 16 33 H 0.38 -1.48 8.74 45.56 0.40 -1.08 16 34 H -0.25 -0.17 7.11 56.52 0.40 0.24 16 35 H -0.25 -0.27 6.74 56.52 0.38 0.11 16 36 H 0.13 0.09 4.87 -52.49 -0.26 -0.16 16 37 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 38 H 0.07 -0.17 8.08 -51.93 -0.42 -0.59 16 39 H 0.07 -0.27 8.08 -51.93 -0.42 -0.68 16 40 H 0.13 -0.48 6.40 -52.49 -0.34 -0.82 16 41 H 0.09 -0.23 8.14 -51.93 -0.42 -0.65 16 42 H 0.11 -0.04 7.43 -51.93 -0.39 -0.43 16 LS Contribution 356.24 15.07 5.37 5.37 Total: 0.00 -11.59 356.24 -8.66 -20.24 By element: Atomic # 1 Polarization: -5.54 SS G_CDS: -4.67 Total: -10.22 kcal Atomic # 6 Polarization: 2.85 SS G_CDS: -2.09 Total: 0.76 kcal Atomic # 7 Polarization: 0.50 SS G_CDS: -0.28 Total: 0.21 kcal Atomic # 8 Polarization: -8.34 SS G_CDS: -1.85 Total: -10.19 kcal Atomic # 14 Polarization: -1.05 SS G_CDS: -5.13 Total: -6.18 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -11.59 -8.66 -20.24 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_13422088.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.743 kcal (2) G-P(sol) polarization free energy of solvation -11.586 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.328 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.659 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.244 kcal (6) G-S(sol) free energy of system = (1) + (5) -131.987 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds