Wall clock time and date at job start Sat Mar 6 2021 16:04:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34234 * 116.99938 * 2 1 4 4 O 1.20822 * 119.99973 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00068 * 179.97438 * 3 2 1 6 6 H 1.08999 * 112.85013 * 48.79797 * 5 3 2 7 7 C 1.53773 * 113.61589 * 180.02562 * 5 3 2 8 8 C 1.53783 * 87.08167 * 139.98020 * 7 5 3 9 9 H 1.09005 * 113.61207 * 219.93782 * 8 7 5 10 10 N 1.46498 * 113.61279 * 89.11761 * 8 7 5 11 11 C 1.34782 * 119.99713 * 154.99822 * 10 8 7 12 12 O 1.21651 * 120.00245 * 0.02562 * 11 10 8 13 13 C 1.47041 * 119.99975 * 179.97438 * 11 10 8 14 14 C 1.36226 * 123.49550 * 179.70775 * 13 11 10 15 15 Cl 1.73598 * 124.60211 * 0.02562 * 14 13 11 16 16 S 1.70442 * 110.78981 * 179.89227 * 14 13 11 17 17 C 1.75499 * 92.46748 * 0.31766 * 16 14 13 18 18 C 1.50700 * 124.68366 * 179.85795 * 17 16 14 19 19 O 1.42900 * 109.47094 * 119.95663 * 18 17 16 20 20 Si 1.86295 * 109.47372 * 359.95662 * 18 17 16 21 21 C 1.32692 * 110.62871 * 359.81848 * 17 16 14 22 22 C 1.53782 * 87.08248 * 334.56531 * 8 7 5 23 23 H 1.08999 * 109.47008 * 59.99921 * 1 2 3 24 24 H 1.09006 * 109.46832 * 179.97438 * 1 2 3 25 25 H 1.08996 * 109.47465 * 299.99911 * 1 2 3 26 26 H 1.09003 * 113.61414 * 254.52677 * 7 5 3 27 27 H 1.09000 * 113.61305 * 25.43121 * 7 5 3 28 28 H 0.96990 * 120.00174 * 334.99983 * 10 8 7 29 29 H 1.08998 * 109.46899 * 239.95679 * 18 17 16 30 30 H 0.96697 * 114.00146 * 299.99546 * 19 18 17 31 31 H 1.48501 * 110.00291 * 58.68162 * 20 18 17 32 32 H 1.48503 * 110.00029 * 180.02562 * 20 18 17 33 33 H 1.07993 * 123.45056 * 180.02562 * 21 17 16 34 34 H 1.08997 * 113.61322 * 270.88478 * 22 8 7 35 35 H 1.08998 * 113.60983 * 139.97830 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0239 0.6362 -0.7548 7 6 4.1077 2.7142 0.0011 8 6 5.1806 2.2266 0.9890 9 1 5.3964 2.9385 1.7858 10 7 6.3902 1.7179 0.3377 11 6 7.5663 1.7310 0.9959 12 8 7.6233 2.1648 2.1310 13 6 8.7803 1.2198 0.3424 14 6 10.0052 1.2045 0.9383 15 17 10.3271 1.7779 2.5450 16 16 11.1780 0.5427 -0.1065 17 6 10.0035 0.2847 -1.3847 18 6 10.3194 -0.3123 -2.7319 19 8 9.5510 -1.5028 -2.9173 20 14 12.1341 -0.7248 -2.8183 21 6 8.7988 0.6873 -1.0009 22 6 4.1905 1.1232 1.3979 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3634 0.5138 0.8899 26 1 4.5112 3.0293 -0.9612 27 1 3.4171 3.4403 0.4299 28 1 6.3447 1.3717 -0.5672 29 1 10.0723 0.4052 -3.5143 30 1 9.7200 -2.1871 -2.2553 31 1 12.4904 -1.6779 -1.7367 32 1 12.4586 -1.3138 -4.1423 33 1 7.9219 0.6231 -1.6279 34 1 3.5226 1.4144 2.2085 35 1 4.6609 0.1539 1.5630 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12121848_13431040.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:04:16 Heat of formation + Delta-G solvation = -87.429389 kcal Electronic energy + Delta-G solvation = -23379.493585 eV Core-core repulsion = 19498.347099 eV Total energy + Delta-G solvation = -3881.146486 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.036 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.07169 -41.09091 -39.55166 -38.74587 -37.94985 -37.45137 -36.99301 -34.33846 -31.64913 -29.48752 -27.44218 -26.84624 -26.80886 -25.49924 -22.53959 -22.28575 -20.90016 -20.42914 -19.46814 -18.84351 -18.06285 -17.89509 -17.66438 -17.41676 -16.85523 -16.49914 -16.10623 -15.99261 -15.75418 -15.19549 -15.01152 -14.67800 -14.50855 -14.36357 -14.20596 -13.91770 -13.68177 -13.45637 -13.14042 -12.93325 -12.84203 -12.57398 -12.47052 -12.12693 -11.87886 -11.82590 -11.79234 -11.75924 -11.38958 -11.01454 -10.72902 -10.23289 -9.85835 -9.64439 -5.03502 -0.61232 -0.16721 0.50653 0.73321 1.05865 1.06732 1.21113 1.54972 1.72045 1.91737 2.06209 2.15615 3.22555 3.26073 3.32217 3.49358 3.66298 3.76080 3.83940 3.91508 4.05458 4.24935 4.27479 4.38730 4.49569 4.56791 4.63118 4.67481 4.72428 4.78032 4.83566 4.88813 4.99556 4.99966 5.33737 5.47039 6.42955 6.43979 6.64460 7.12699 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.468 3.532 4 O -0.538 6.538 5 C -0.105 4.105 6 H 0.153 0.847 7 C -0.117 4.117 8 C 0.125 3.875 9 H 0.097 0.903 10 N -0.691 5.691 11 C 0.575 3.425 12 O -0.556 6.556 13 C -0.166 4.166 14 C -0.139 4.139 15 Cl 0.002 6.998 16 S 0.262 5.738 17 C -0.226 4.226 18 C -0.026 4.026 19 O -0.534 6.534 20 Si 0.701 3.299 21 C -0.067 4.067 22 C -0.128 4.128 23 H 0.062 0.938 24 H 0.127 0.873 25 H 0.059 0.941 26 H 0.104 0.896 27 H 0.099 0.901 28 H 0.417 0.583 29 H 0.151 0.849 30 H 0.390 0.610 31 H -0.260 1.260 32 H -0.270 1.270 33 H 0.183 0.817 34 H 0.092 0.908 35 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.115 -2.747 -5.330 6.358 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.280 6.280 3 C 0.312 3.688 4 O -0.428 6.428 5 C -0.124 4.124 6 H 0.170 0.830 7 C -0.155 4.155 8 C 0.019 3.981 9 H 0.115 0.885 10 N -0.344 5.344 11 C 0.362 3.638 12 O -0.435 6.435 13 C -0.186 4.186 14 C -0.285 4.285 15 Cl 0.031 6.969 16 S 0.528 5.472 17 C -0.343 4.343 18 C -0.138 4.138 19 O -0.343 6.343 20 Si 0.603 3.397 21 C -0.095 4.095 22 C -0.167 4.167 23 H 0.081 0.919 24 H 0.145 0.855 25 H 0.078 0.922 26 H 0.122 0.878 27 H 0.118 0.882 28 H 0.255 0.745 29 H 0.168 0.832 30 H 0.240 0.760 31 H -0.185 1.185 32 H -0.195 1.195 33 H 0.200 0.800 34 H 0.111 0.889 35 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 3.874 -2.677 -4.844 6.756 hybrid contribution -2.586 -0.548 0.398 2.673 sum 1.288 -3.225 -4.446 5.642 Atomic orbital electron populations 1.23514 0.75171 1.05540 1.02416 1.86523 1.24671 1.33273 1.83494 1.24149 0.92726 0.80962 0.70931 1.90673 1.67946 1.37450 1.46720 1.22793 0.85679 1.01607 1.02274 0.82965 1.23289 0.96149 0.94516 1.01496 1.21692 0.83471 0.96286 0.96616 0.88452 1.45333 1.06243 1.63872 1.18914 1.17663 0.83192 0.77839 0.85146 1.90872 1.86197 1.47303 1.19159 1.20288 0.92783 1.09004 0.96484 1.25824 1.00477 1.07399 0.94849 1.98430 1.94721 1.86422 1.17328 1.83331 1.07878 1.54674 1.01343 1.24869 0.97341 1.10425 1.01680 1.24447 1.06998 0.89172 0.93226 1.86623 1.64885 1.26369 1.56376 0.94565 0.75181 0.89392 0.80547 1.21144 0.99281 0.96886 0.92190 1.23362 0.97523 1.01174 0.94664 0.91948 0.85451 0.92201 0.87773 0.88238 0.74489 0.83159 0.76021 1.18490 1.19540 0.79967 0.88916 0.89075 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.17 16 2 O -0.36 -0.84 10.57 -51.46 -0.54 -1.38 16 3 C 0.47 1.42 7.48 71.24 0.53 1.96 16 4 O -0.54 -5.12 15.65 21.98 0.34 -4.78 16 5 C -0.10 0.42 4.14 -11.01 -0.05 0.37 16 6 H 0.15 -1.45 8.14 -2.39 -0.02 -1.47 16 7 C -0.12 0.46 7.15 31.12 0.22 0.68 16 8 C 0.13 -0.26 4.32 45.52 0.20 -0.06 16 9 H 0.10 0.23 7.46 -2.38 -0.02 0.21 16 10 N -0.69 2.41 5.24 -443.64 -2.33 0.09 16 11 C 0.58 2.09 7.79 86.55 0.67 2.76 16 12 O -0.56 -6.61 14.51 -4.19 -0.06 -6.67 16 13 C -0.17 -0.09 5.98 -19.84 -0.12 -0.21 16 14 C -0.14 -0.33 6.87 67.35 0.46 0.13 16 15 Cl 0.00 0.01 27.20 -2.72 -0.07 -0.06 16 16 S 0.26 -0.95 20.17 -56.49 -1.14 -2.09 16 17 C -0.23 1.42 5.68 24.52 0.14 1.56 16 18 C -0.03 0.21 2.95 71.24 0.21 0.42 16 19 O -0.53 2.95 12.85 -148.98 -1.91 1.04 16 20 Si 0.70 -4.55 30.91 68.60 2.12 -2.43 16 21 C -0.07 0.39 9.71 22.70 0.22 0.61 16 22 C -0.13 0.35 7.43 31.12 0.23 0.59 16 23 H 0.06 -0.05 8.13 -2.39 -0.02 -0.07 16 24 H 0.13 -0.84 8.14 -2.38 -0.02 -0.86 16 25 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 26 H 0.10 -0.76 8.14 -2.39 -0.02 -0.78 16 27 H 0.10 -0.04 7.43 -2.39 -0.02 -0.06 16 28 H 0.42 -4.18 7.24 -92.72 -0.67 -4.85 16 29 H 0.15 -1.68 7.96 -2.39 -0.02 -1.69 16 30 H 0.39 -4.05 8.70 -74.06 -0.64 -4.69 16 31 H -0.26 0.69 7.11 99.48 0.71 1.39 16 32 H -0.27 -0.10 7.11 99.48 0.71 0.60 16 33 H 0.18 -2.11 7.10 -2.91 -0.02 -2.13 16 34 H 0.09 -0.12 8.09 -2.39 -0.02 -0.14 16 35 H 0.09 -0.28 8.14 -2.39 -0.02 -0.30 16 Total: 0.00 -21.39 334.18 0.22 -21.18 By element: Atomic # 1 Polarization: -14.75 SS G_CDS: -0.11 Total: -14.86 kcal Atomic # 6 Polarization: 6.05 SS G_CDS: 3.92 Total: 9.97 kcal Atomic # 7 Polarization: 2.41 SS G_CDS: -2.33 Total: 0.09 kcal Atomic # 8 Polarization: -9.61 SS G_CDS: -2.17 Total: -11.79 kcal Atomic # 14 Polarization: -4.55 SS G_CDS: 2.12 Total: -2.43 kcal Atomic # 16 Polarization: -0.95 SS G_CDS: -1.14 Total: -2.09 kcal Atomic # 17 Polarization: 0.01 SS G_CDS: -0.07 Total: -0.06 kcal Total: -21.39 0.22 -21.18 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_13431040.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.251 kcal (2) G-P(sol) polarization free energy of solvation -21.394 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.646 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.216 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.178 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.429 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds