Wall clock time and date at job start Sat Mar 6 2021 16:04:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34228 * 117.00422 * 2 1 4 4 O 1.20832 * 119.99661 * 0.02562 * 3 2 1 5 5 C 1.50697 * 120.00193 * 179.97438 * 3 2 1 6 6 H 1.09002 * 112.84782 * 50.33763 * 5 3 2 7 7 C 1.53786 * 113.61519 * 181.53173 * 5 3 2 8 8 C 1.53783 * 87.08050 * 140.06465 * 7 5 3 9 9 H 1.08993 * 113.61424 * 220.01734 * 8 7 5 10 10 N 1.46499 * 113.61210 * 89.20097 * 8 7 5 11 11 C 1.34776 * 119.99999 * 154.99616 * 10 8 7 12 12 O 1.21614 * 119.99969 * 0.02562 * 11 10 8 13 13 C 1.47377 * 120.00004 * 179.97438 * 11 10 8 14 14 C 1.36417 * 127.19339 * 359.68785 * 13 11 10 15 15 O 1.33651 * 108.40012 * 179.89200 * 14 13 11 16 16 C 1.34213 * 110.90484 * 0.38623 * 15 14 13 17 17 C 1.50700 * 125.43686 * 179.76074 * 16 15 14 18 18 O 1.42897 * 109.47114 * 120.00470 * 17 16 15 19 19 Si 1.86298 * 109.47167 * 0.02562 * 17 16 15 20 20 C 1.34176 * 109.12779 * 359.76696 * 16 15 14 21 21 C 1.53781 * 113.61630 * 279.14121 * 5 3 2 22 22 H 1.08997 * 109.47255 * 299.99851 * 1 2 3 23 23 H 1.09007 * 109.46533 * 59.99810 * 1 2 3 24 24 H 1.09000 * 109.47550 * 179.97438 * 1 2 3 25 25 H 1.08992 * 113.61675 * 254.61723 * 7 5 3 26 26 H 1.09005 * 113.61030 * 25.43373 * 7 5 3 27 27 H 0.96999 * 120.00027 * 335.00632 * 10 8 7 28 28 H 1.08000 * 125.80125 * 0.02562 * 14 13 11 29 29 H 1.09011 * 109.47357 * 240.00130 * 17 16 15 30 30 H 0.96703 * 114.00003 * 299.99397 * 18 17 16 31 31 H 1.48501 * 109.99997 * 179.97438 * 19 17 16 32 32 H 1.48495 * 110.00394 * 301.31884 * 19 17 16 33 33 H 1.08002 * 127.02783 * 180.02562 * 20 16 15 34 34 H 1.08999 * 113.61567 * 334.48200 * 21 5 3 35 35 H 1.08998 * 113.61196 * 105.38554 * 21 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2747 0.0006 6 1 4.0228 0.6565 -0.7724 7 6 4.1079 2.7136 0.0382 8 6 5.1835 2.1997 1.0097 9 1 5.4005 2.8893 1.8253 10 7 6.3920 1.7104 0.3417 11 6 7.5696 1.7063 0.9973 12 8 7.6288 2.1083 2.1435 13 6 8.7853 1.2135 0.3255 14 6 8.8855 0.7263 -0.9448 15 8 10.1594 0.3893 -1.1680 16 6 10.9147 0.6273 -0.0844 17 6 12.3944 0.3629 0.0246 18 8 13.0779 1.5870 0.3012 19 14 13.0182 -0.3471 -1.5808 20 6 10.1422 1.1382 0.8864 21 6 4.1927 1.0837 1.3920 22 1 -0.3633 0.5138 0.8900 23 1 -0.3632 0.5139 -0.8901 24 1 -0.3634 -1.0276 -0.0005 25 1 4.5086 3.0544 -0.9164 26 1 3.4178 3.4282 0.4869 27 1 6.3447 1.3895 -0.5724 28 1 8.0739 0.6314 -1.6509 29 1 12.5783 -0.3463 0.8317 30 1 12.9586 2.2660 -0.3770 31 1 14.4764 -0.6117 -1.4865 32 1 12.2929 -1.6038 -1.8964 33 1 10.4535 1.4343 1.8773 34 1 3.5265 1.3533 2.2115 35 1 4.6619 0.1095 1.5295 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12121848_13456056.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:04:19 Heat of formation + Delta-G solvation = -102.600194 kcal Electronic energy + Delta-G solvation = -21444.511013 eV Core-core repulsion = 17798.435785 eV Total energy + Delta-G solvation = -3646.075228 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.103 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -43.70081 -42.02278 -40.78973 -39.08294 -37.99175 -37.45245 -34.70856 -33.68428 -31.72149 -29.42823 -27.29175 -26.84692 -26.52641 -24.91178 -22.51157 -22.30222 -21.16679 -20.47620 -19.32381 -18.81834 -17.96421 -17.76440 -17.48233 -17.45975 -17.18419 -16.92464 -16.15407 -16.02995 -15.61253 -15.39892 -15.05868 -14.65452 -14.26501 -14.23462 -14.00944 -13.73039 -13.60704 -13.47205 -13.12239 -12.85700 -12.80179 -12.20334 -11.88431 -11.83866 -11.76951 -11.39260 -11.27843 -10.94829 -10.62580 -10.22786 -9.75856 -4.96212 0.27892 0.82993 1.06826 1.20690 1.53170 1.72433 1.84016 1.93801 1.98592 2.22833 3.21895 3.31483 3.32354 3.49290 3.61719 3.66806 3.76082 3.99025 4.06292 4.25445 4.27954 4.28967 4.39060 4.49586 4.53430 4.62968 4.67870 4.71582 4.81042 4.88695 4.92346 4.99415 5.14372 5.34650 5.44958 5.85872 6.44959 6.64625 6.65065 7.13295 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.467 3.533 4 O -0.539 6.539 5 C -0.103 4.103 6 H 0.158 0.842 7 C -0.115 4.115 8 C 0.122 3.878 9 H 0.092 0.908 10 N -0.691 5.691 11 C 0.592 3.408 12 O -0.584 6.584 13 C -0.269 4.269 14 C 0.070 3.930 15 O -0.164 6.164 16 C -0.053 4.053 17 C -0.038 4.038 18 O -0.546 6.546 19 Si 0.799 3.201 20 C -0.152 4.152 21 C -0.130 4.130 22 H 0.058 0.942 23 H 0.062 0.938 24 H 0.127 0.873 25 H 0.108 0.892 26 H 0.097 0.903 27 H 0.420 0.580 28 H 0.267 0.733 29 H 0.129 0.871 30 H 0.400 0.600 31 H -0.287 1.287 32 H -0.286 1.286 33 H 0.142 0.858 34 H 0.091 0.909 35 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.709 -2.427 -7.869 8.266 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.312 3.688 4 O -0.429 6.429 5 C -0.122 4.122 6 H 0.176 0.824 7 C -0.153 4.153 8 C 0.017 3.983 9 H 0.111 0.889 10 N -0.343 5.343 11 C 0.381 3.619 12 O -0.465 6.465 13 C -0.274 4.274 14 C 0.000 4.000 15 O -0.059 6.059 16 C -0.101 4.101 17 C -0.147 4.147 18 O -0.354 6.354 19 Si 0.703 3.297 20 C -0.172 4.172 21 C -0.169 4.169 22 H 0.077 0.923 23 H 0.081 0.919 24 H 0.145 0.855 25 H 0.126 0.874 26 H 0.116 0.884 27 H 0.258 0.742 28 H 0.282 0.718 29 H 0.146 0.854 30 H 0.251 0.749 31 H -0.214 1.214 32 H -0.213 1.213 33 H 0.160 0.840 34 H 0.109 0.891 35 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -0.219 -2.964 -7.181 7.771 hybrid contribution -0.887 0.019 0.926 1.282 sum -1.105 -2.945 -6.254 7.001 Atomic orbital electron populations 1.23512 0.75198 1.05533 1.02398 1.86519 1.24637 1.33283 1.83489 1.24179 0.92785 0.80948 0.70927 1.90680 1.67984 1.37481 1.46725 1.22807 0.85582 1.01497 1.02268 0.82430 1.23280 0.95935 0.94531 1.01582 1.21747 0.83588 0.96348 0.96662 0.88938 1.45262 1.06031 1.65177 1.17808 1.17495 0.82862 0.76608 0.84936 1.90806 1.86562 1.49349 1.19745 1.21410 0.94353 1.14234 0.97404 1.25379 0.85014 0.93629 0.96023 1.83719 1.18940 1.65887 1.37368 1.22738 0.95386 1.06297 0.85690 1.24665 0.83878 0.92267 1.13854 1.86545 1.71115 1.24954 1.52795 0.93180 0.76291 0.81849 0.78397 1.22547 0.91244 1.02851 1.00561 1.23416 0.97488 1.01071 0.94938 0.92286 0.91908 0.85458 0.87391 0.88415 0.74194 0.71767 0.85409 0.74893 1.21427 1.21261 0.84034 0.89088 0.88976 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.14 16 2 O -0.36 -0.46 10.56 -51.40 -0.54 -1.01 16 3 C 0.47 0.89 7.48 71.24 0.53 1.42 16 4 O -0.54 -4.65 15.66 21.95 0.34 -4.31 16 5 C -0.10 0.57 4.13 -11.01 -0.05 0.53 16 6 H 0.16 -1.92 8.14 -2.39 -0.02 -1.94 16 7 C -0.12 0.61 7.14 31.12 0.22 0.83 16 8 C 0.12 -0.35 4.33 45.61 0.20 -0.15 16 9 H 0.09 0.24 7.46 -2.39 -0.02 0.22 16 10 N -0.69 3.56 5.26 -442.91 -2.33 1.23 16 11 C 0.59 2.18 7.81 86.65 0.68 2.86 16 12 O -0.58 -8.46 16.58 -4.07 -0.07 -8.53 16 13 C -0.27 -0.10 6.31 -18.99 -0.12 -0.22 16 14 C 0.07 -0.57 11.61 67.39 0.78 0.22 16 15 O -0.16 0.71 8.89 4.50 0.04 0.75 16 16 C -0.05 0.03 6.20 24.76 0.15 0.18 16 17 C -0.04 0.08 2.97 71.24 0.21 0.29 16 18 O -0.55 0.65 12.86 -148.98 -1.92 -1.27 16 19 Si 0.80 -3.47 32.08 68.60 2.20 -1.27 16 20 C -0.15 -0.60 10.88 23.65 0.26 -0.34 16 21 C -0.13 0.47 7.45 31.21 0.23 0.70 16 22 H 0.06 -0.05 8.13 -2.39 -0.02 -0.07 16 23 H 0.06 -0.10 8.13 -2.38 -0.02 -0.12 16 24 H 0.13 -0.93 8.14 -2.39 -0.02 -0.95 16 25 H 0.11 -1.01 8.14 -2.39 -0.02 -1.03 16 26 H 0.10 -0.13 7.45 -2.38 -0.02 -0.15 16 27 H 0.42 -5.82 7.67 -92.71 -0.71 -6.53 16 28 H 0.27 -5.34 7.47 -2.91 -0.02 -5.36 16 29 H 0.13 -0.21 7.96 -2.38 -0.02 -0.23 16 30 H 0.40 -3.83 8.70 -74.06 -0.64 -4.48 16 31 H -0.29 -0.63 7.11 99.48 0.71 0.07 16 32 H -0.29 -0.35 7.11 99.48 0.71 0.36 16 33 H 0.14 1.03 8.06 -2.91 -0.02 1.01 16 34 H 0.09 -0.16 8.09 -2.39 -0.02 -0.18 16 35 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 Total: 0.00 -28.54 314.70 1.85 -26.69 By element: Atomic # 1 Polarization: -19.58 SS G_CDS: -0.18 Total: -19.76 kcal Atomic # 6 Polarization: 3.17 SS G_CDS: 4.30 Total: 7.47 kcal Atomic # 7 Polarization: 3.56 SS G_CDS: -2.33 Total: 1.23 kcal Atomic # 8 Polarization: -12.22 SS G_CDS: -2.14 Total: -14.37 kcal Atomic # 14 Polarization: -3.47 SS G_CDS: 2.20 Total: -1.27 kcal Total: -28.54 1.85 -26.69 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_13456056.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.910 kcal (2) G-P(sol) polarization free energy of solvation -28.540 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.450 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.850 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.691 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.600 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds