Wall clock time and date at job start Sat Mar 6 2021 16:04:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34228 * 116.99985 * 2 1 4 4 O 1.20826 * 120.00319 * 359.97438 * 3 2 1 5 5 C 1.50706 * 120.00394 * 179.97438 * 3 2 1 6 6 H 1.09005 * 112.84456 * 50.33787 * 5 3 2 7 7 C 1.53777 * 113.61758 * 181.52931 * 5 3 2 8 8 C 1.53781 * 87.08039 * 139.98447 * 7 5 3 9 9 H 1.08994 * 113.61209 * 219.93347 * 8 7 5 10 10 N 1.46497 * 113.61211 * 89.11716 * 8 7 5 11 11 C 1.34774 * 119.99715 * 155.00093 * 10 8 7 12 12 O 1.21283 * 120.00359 * 359.97438 * 11 10 8 13 13 C 1.50711 * 119.99963 * 180.02562 * 11 10 8 14 14 C 1.50694 * 109.46819 * 179.97438 * 13 11 10 15 15 C 1.34849 * 125.89373 * 274.68553 * 14 13 11 16 16 C 1.40887 * 107.41793 * 179.89108 * 15 14 13 17 17 C 1.34851 * 107.41939 * 0.38098 * 16 15 14 18 18 C 1.50697 * 125.89061 * 179.73662 * 17 16 15 19 19 O 1.42900 * 109.47138 * 120.04103 * 18 17 16 20 20 Si 1.86301 * 109.47416 * 0.03848 * 18 17 16 21 21 N 1.36338 * 108.21485 * 359.76980 * 17 16 15 22 22 C 1.53776 * 113.61737 * 279.14251 * 5 3 2 23 23 H 1.09002 * 109.47379 * 299.99940 * 1 2 3 24 24 H 1.09001 * 109.46782 * 180.02562 * 1 2 3 25 25 H 1.09004 * 109.47085 * 60.00143 * 1 2 3 26 26 H 1.08996 * 113.61478 * 254.53401 * 7 5 3 27 27 H 1.08999 * 113.61164 * 25.43422 * 7 5 3 28 28 H 0.97004 * 120.00227 * 334.99691 * 10 8 7 29 29 H 1.08999 * 109.46451 * 299.99924 * 13 11 10 30 30 H 1.08998 * 109.46797 * 59.99478 * 13 11 10 31 31 H 1.08003 * 126.28727 * 0.02944 * 15 14 13 32 32 H 1.08008 * 126.28967 * 180.17391 * 16 15 14 33 33 H 1.09005 * 109.46840 * 240.04098 * 18 17 16 34 34 H 0.96694 * 114.00151 * 299.99673 * 19 18 17 35 35 H 1.48495 * 109.99993 * 180.02562 * 20 18 17 36 36 H 1.48503 * 109.99967 * 301.32213 * 20 18 17 37 37 H 0.97004 * 125.63434 * 180.02562 * 21 17 16 38 38 H 1.09002 * 113.61432 * 334.56248 * 22 5 3 39 39 H 1.08997 * 113.61475 * 105.46299 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2750 0.0006 6 1 4.0229 0.6567 -0.7724 7 6 4.1077 2.7138 0.0381 8 6 5.1821 2.2004 1.0113 9 1 5.3990 2.8912 1.8260 10 7 6.3907 1.7090 0.3451 11 6 7.5677 1.7048 1.0017 12 8 7.6263 2.1083 2.1439 13 6 8.8112 1.1998 0.3162 14 6 9.9816 1.3019 1.2599 15 6 10.7488 2.3939 1.4528 16 6 11.7225 2.0608 2.4150 17 6 11.5185 0.7752 2.7673 18 6 12.3305 -0.0062 3.7679 19 8 11.4821 -0.4465 4.8300 20 14 13.6773 1.0801 4.4585 21 7 10.4513 0.3041 2.0616 22 6 4.1927 1.0840 1.3919 23 1 -0.3634 0.5138 0.8900 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5138 -0.8900 26 1 4.5098 3.0541 -0.9161 27 1 3.4177 3.4283 0.4868 28 1 6.3439 1.3866 -0.5686 29 1 8.6683 0.1592 0.0250 30 1 9.0068 1.8018 -0.5712 31 1 10.6360 3.3492 0.9616 32 1 12.4930 2.7139 2.7975 33 1 12.7771 -0.8710 3.2772 34 1 11.0501 0.2719 5.3120 35 1 14.4857 0.3210 5.4461 36 1 14.5478 1.5704 3.3599 37 1 10.0863 -0.5927 2.1205 38 1 3.5260 1.3521 2.2115 39 1 4.6632 0.1104 1.5290 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_14644196.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:04:24 Heat of formation + Delta-G solvation = -77.496357 kcal Electronic energy + Delta-G solvation = -23076.913757 eV Core-core repulsion = 19374.108156 eV Total energy + Delta-G solvation = -3702.805601 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -42.32982 -41.97473 -40.74579 -39.12440 -37.64540 -37.34872 -34.44383 -33.00276 -31.85580 -29.76317 -29.14589 -27.00992 -26.96336 -25.14639 -22.75610 -22.13034 -21.29049 -20.99809 -20.47903 -19.04673 -18.83301 -18.18500 -17.70707 -17.37007 -17.29181 -16.71792 -16.39190 -16.21064 -15.61017 -15.18336 -15.10622 -14.88280 -14.55391 -14.32448 -14.17315 -14.02775 -13.92057 -13.77568 -13.62007 -13.41335 -13.21604 -12.87237 -12.78939 -11.99719 -11.96527 -11.88399 -11.86308 -11.81535 -11.35180 -10.95007 -10.59598 -10.20304 -9.71454 -8.89940 -4.93530 1.12082 1.13892 1.31410 1.55476 1.67061 1.70977 1.88543 1.97012 2.23266 2.49556 3.11271 3.20287 3.48020 3.52717 3.60161 3.64827 3.84593 3.88219 3.92594 3.98425 4.12957 4.20815 4.32405 4.35988 4.43595 4.50089 4.56157 4.58962 4.61220 4.69306 4.72764 4.82201 4.88245 5.32021 5.35381 5.35567 5.40381 6.05393 6.19787 6.33761 6.55935 6.66149 6.69662 7.14616 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.503 6.503 5 C -0.112 4.112 6 H 0.125 0.875 7 C -0.124 4.124 8 C 0.123 3.877 9 H 0.114 0.886 10 N -0.718 5.718 11 C 0.515 3.485 12 O -0.517 6.517 13 C -0.071 4.071 14 C 0.034 3.966 15 C -0.172 4.172 16 C -0.188 4.188 17 C -0.010 4.010 18 C -0.050 4.050 19 O -0.547 6.547 20 Si 0.720 3.280 21 N -0.535 5.535 22 C -0.132 4.132 23 H 0.064 0.936 24 H 0.103 0.897 25 H 0.064 0.936 26 H 0.086 0.914 27 H 0.112 0.888 28 H 0.402 0.598 29 H 0.100 0.900 30 H 0.118 0.882 31 H 0.137 0.863 32 H 0.141 0.859 33 H 0.109 0.891 34 H 0.383 0.617 35 H -0.256 1.256 36 H -0.255 1.255 37 H 0.412 0.588 38 H 0.098 0.902 39 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.925 -1.261 -3.142 3.510 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.312 3.688 4 O -0.391 6.391 5 C -0.131 4.131 6 H 0.143 0.857 7 C -0.162 4.162 8 C 0.017 3.983 9 H 0.132 0.868 10 N -0.370 5.370 11 C 0.301 3.699 12 O -0.391 6.391 13 C -0.112 4.112 14 C -0.080 4.080 15 C -0.197 4.197 16 C -0.213 4.213 17 C -0.123 4.123 18 C -0.160 4.160 19 O -0.353 6.353 20 Si 0.620 3.380 21 N -0.130 5.130 22 C -0.171 4.171 23 H 0.083 0.917 24 H 0.121 0.879 25 H 0.083 0.917 26 H 0.105 0.895 27 H 0.130 0.870 28 H 0.237 0.763 29 H 0.118 0.882 30 H 0.136 0.864 31 H 0.154 0.846 32 H 0.159 0.841 33 H 0.127 0.873 34 H 0.231 0.769 35 H -0.181 1.181 36 H -0.179 1.179 37 H 0.249 0.751 38 H 0.116 0.884 39 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -0.089 -1.284 -2.391 2.715 hybrid contribution -0.932 -1.067 -1.099 1.793 sum -1.021 -2.351 -3.490 4.330 Atomic orbital electron populations 1.23327 0.75926 1.04013 1.02743 1.86517 1.23754 1.33373 1.83808 1.23582 0.91697 0.81434 0.72136 1.90692 1.66980 1.36417 1.44964 1.22655 0.87612 1.01064 1.01813 0.85729 1.23358 0.97027 0.94693 1.01145 1.21812 0.83605 0.96216 0.96648 0.86782 1.45699 1.07458 1.66369 1.17510 1.20635 0.84198 0.78224 0.86881 1.90778 1.85561 1.45219 1.17537 1.20128 0.89297 1.03987 0.97799 1.19454 0.99054 0.89970 0.99475 1.20594 0.98206 0.97939 1.02943 1.20656 1.03099 0.94455 1.03087 1.20841 0.94621 0.95592 1.01260 1.24836 0.99518 1.03846 0.87799 1.86462 1.64681 1.37387 1.46732 0.93946 0.76778 0.84445 0.82847 1.41783 1.25555 1.12808 1.32825 1.23425 0.97914 1.01085 0.94673 0.91723 0.87858 0.91722 0.89513 0.86975 0.76331 0.88163 0.86372 0.84557 0.84120 0.87319 0.76942 1.18088 1.17912 0.75104 0.88361 0.89550 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.35 10.57 -39.25 -0.41 -0.77 16 3 C 0.47 0.55 7.48 36.01 0.27 0.82 16 4 O -0.50 -2.07 15.66 -18.75 -0.29 -2.36 16 5 C -0.11 0.23 4.13 -90.96 -0.38 -0.14 16 6 H 0.12 -0.53 8.14 -51.93 -0.42 -0.95 16 7 C -0.12 0.28 7.14 -25.92 -0.19 0.09 16 8 C 0.12 -0.22 4.33 -67.03 -0.29 -0.51 16 9 H 0.11 0.01 7.46 -51.93 -0.39 -0.37 16 10 N -0.72 2.08 5.26 -52.93 -0.28 1.80 16 11 C 0.51 -0.13 7.82 -10.98 -0.09 -0.22 16 12 O -0.52 -2.30 15.63 5.55 0.09 -2.21 16 13 C -0.07 0.18 6.24 -29.03 -0.18 0.00 16 14 C 0.03 0.03 5.66 -81.79 -0.46 -0.43 16 15 C -0.17 -0.33 10.76 -39.78 -0.43 -0.76 16 16 C -0.19 -0.32 9.37 -39.78 -0.37 -0.70 16 17 C -0.01 -0.01 6.50 -81.79 -0.53 -0.55 16 18 C -0.05 -0.02 3.08 36.00 0.11 0.09 16 19 O -0.55 -0.53 12.88 -35.23 -0.45 -0.99 16 20 Si 0.72 -0.39 30.59 -169.99 -5.20 -5.59 16 21 N -0.54 -0.46 6.07 -5.44 -0.03 -0.49 16 22 C -0.13 0.25 7.44 -25.83 -0.19 0.06 16 23 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 24 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 25 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 26 H 0.09 -0.29 8.14 -51.93 -0.42 -0.72 16 27 H 0.11 -0.10 7.45 -51.93 -0.39 -0.49 16 28 H 0.40 -2.34 8.70 -40.82 -0.36 -2.70 16 29 H 0.10 -0.48 8.14 -51.93 -0.42 -0.90 16 30 H 0.12 -0.55 8.14 -51.93 -0.42 -0.97 16 31 H 0.14 0.10 8.06 -52.48 -0.42 -0.32 16 32 H 0.14 0.01 6.22 -52.48 -0.33 -0.32 16 33 H 0.11 0.05 7.96 -51.93 -0.41 -0.37 16 34 H 0.38 -0.81 8.70 45.56 0.40 -0.41 16 35 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 36 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 37 H 0.41 -0.30 8.96 -40.82 -0.37 -0.67 16 38 H 0.10 -0.14 8.09 -51.93 -0.42 -0.56 16 39 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 LS Contribution 338.13 15.07 5.10 5.10 Total: 0.00 -10.55 338.13 -8.41 -18.96 By element: Atomic # 1 Polarization: -6.98 SS G_CDS: -5.26 Total: -12.25 kcal Atomic # 6 Polarization: 0.46 SS G_CDS: -1.66 Total: -1.20 kcal Atomic # 7 Polarization: 1.63 SS G_CDS: -0.31 Total: 1.31 kcal Atomic # 8 Polarization: -5.25 SS G_CDS: -1.08 Total: -6.33 kcal Atomic # 14 Polarization: -0.39 SS G_CDS: -5.20 Total: -5.59 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -10.55 -8.41 -18.96 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_14644196.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.540 kcal (2) G-P(sol) polarization free energy of solvation -10.546 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.086 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.410 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.956 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.496 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds