Wall clock time and date at job start Sat Mar 6 2021 16:04:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34228 * 116.99985 * 2 1 4 4 O 1.20826 * 120.00319 * 359.97438 * 3 2 1 5 5 C 1.50706 * 120.00394 * 179.97438 * 3 2 1 6 6 H 1.09005 * 112.84456 * 50.33787 * 5 3 2 7 7 C 1.53777 * 113.61758 * 181.52931 * 5 3 2 8 8 C 1.53781 * 87.08039 * 139.98447 * 7 5 3 9 9 H 1.08994 * 113.61209 * 219.93347 * 8 7 5 10 10 N 1.46497 * 113.61211 * 89.11716 * 8 7 5 11 11 C 1.34774 * 119.99715 * 155.00093 * 10 8 7 12 12 O 1.21283 * 120.00359 * 359.97438 * 11 10 8 13 13 C 1.50711 * 119.99963 * 180.02562 * 11 10 8 14 14 C 1.50694 * 109.46819 * 179.97438 * 13 11 10 15 15 C 1.34849 * 125.89373 * 274.68553 * 14 13 11 16 16 C 1.40887 * 107.41793 * 179.89108 * 15 14 13 17 17 C 1.34851 * 107.41939 * 0.38098 * 16 15 14 18 18 C 1.50697 * 125.89061 * 179.73662 * 17 16 15 19 19 O 1.42900 * 109.47138 * 120.04103 * 18 17 16 20 20 Si 1.86301 * 109.47416 * 0.03848 * 18 17 16 21 21 N 1.36338 * 108.21485 * 359.76980 * 17 16 15 22 22 C 1.53776 * 113.61737 * 279.14251 * 5 3 2 23 23 H 1.09002 * 109.47379 * 299.99940 * 1 2 3 24 24 H 1.09001 * 109.46782 * 180.02562 * 1 2 3 25 25 H 1.09004 * 109.47085 * 60.00143 * 1 2 3 26 26 H 1.08996 * 113.61478 * 254.53401 * 7 5 3 27 27 H 1.08999 * 113.61164 * 25.43422 * 7 5 3 28 28 H 0.97004 * 120.00227 * 334.99691 * 10 8 7 29 29 H 1.08999 * 109.46451 * 299.99924 * 13 11 10 30 30 H 1.08998 * 109.46797 * 59.99478 * 13 11 10 31 31 H 1.08003 * 126.28727 * 0.02944 * 15 14 13 32 32 H 1.08008 * 126.28967 * 180.17391 * 16 15 14 33 33 H 1.09005 * 109.46840 * 240.04098 * 18 17 16 34 34 H 0.96694 * 114.00151 * 299.99673 * 19 18 17 35 35 H 1.48495 * 109.99993 * 180.02562 * 20 18 17 36 36 H 1.48503 * 109.99967 * 301.32213 * 20 18 17 37 37 H 0.97004 * 125.63434 * 180.02562 * 21 17 16 38 38 H 1.09002 * 113.61432 * 334.56248 * 22 5 3 39 39 H 1.08997 * 113.61475 * 105.46299 * 22 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2750 0.0006 6 1 4.0229 0.6567 -0.7724 7 6 4.1077 2.7138 0.0381 8 6 5.1821 2.2004 1.0113 9 1 5.3990 2.8912 1.8260 10 7 6.3907 1.7090 0.3451 11 6 7.5677 1.7048 1.0017 12 8 7.6263 2.1083 2.1439 13 6 8.8112 1.1998 0.3162 14 6 9.9816 1.3019 1.2599 15 6 10.7488 2.3939 1.4528 16 6 11.7225 2.0608 2.4150 17 6 11.5185 0.7752 2.7673 18 6 12.3305 -0.0062 3.7679 19 8 11.4821 -0.4465 4.8300 20 14 13.6773 1.0801 4.4585 21 7 10.4513 0.3041 2.0616 22 6 4.1927 1.0840 1.3919 23 1 -0.3634 0.5138 0.8900 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5138 -0.8900 26 1 4.5098 3.0541 -0.9161 27 1 3.4177 3.4283 0.4868 28 1 6.3439 1.3866 -0.5686 29 1 8.6683 0.1592 0.0250 30 1 9.0068 1.8018 -0.5712 31 1 10.6360 3.3492 0.9616 32 1 12.4930 2.7139 2.7975 33 1 12.7771 -0.8710 3.2772 34 1 11.0501 0.2719 5.3120 35 1 14.4857 0.3210 5.4461 36 1 14.5478 1.5704 3.3599 37 1 10.0863 -0.5927 2.1205 38 1 3.5260 1.3521 2.2115 39 1 4.6632 0.1104 1.5290 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12121848_14644196.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:04:23 Heat of formation + Delta-G solvation = -80.482635 kcal Electronic energy + Delta-G solvation = -23077.043252 eV Core-core repulsion = 19374.108156 eV Total energy + Delta-G solvation = -3702.935096 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.130 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.33226 -41.98273 -40.74365 -39.09599 -37.68526 -37.45484 -34.40000 -32.92389 -31.89552 -29.73718 -29.10061 -26.92184 -26.83199 -25.14994 -22.73888 -22.08934 -21.33242 -21.00121 -20.40016 -19.04268 -18.84815 -18.18224 -17.68676 -17.39646 -17.24026 -16.67845 -16.34777 -16.20142 -15.53407 -15.20557 -15.08304 -14.84118 -14.58910 -14.30492 -14.17907 -14.06611 -13.90369 -13.76221 -13.52432 -13.37581 -13.14334 -12.84239 -12.69019 -12.06898 -11.97881 -11.88393 -11.82088 -11.75353 -11.38511 -10.97937 -10.63476 -10.10790 -9.77218 -8.93333 -4.92347 1.05762 1.12040 1.31266 1.62675 1.68421 1.72258 1.88992 1.92893 2.28440 2.52527 3.23736 3.33731 3.51299 3.66686 3.71407 3.76687 3.82593 4.03185 4.08599 4.24523 4.25130 4.26919 4.40194 4.50375 4.51934 4.63357 4.65866 4.67284 4.73833 4.82124 4.83500 4.89725 5.02815 5.28002 5.31650 5.33545 5.53674 6.02107 6.15860 6.53927 6.64074 6.65688 6.70275 7.28348 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.364 6.364 3 C 0.466 3.534 4 O -0.540 6.540 5 C -0.104 4.104 6 H 0.156 0.844 7 C -0.118 4.118 8 C 0.125 3.875 9 H 0.091 0.909 10 N -0.700 5.700 11 C 0.515 3.485 12 O -0.571 6.571 13 C -0.067 4.067 14 C 0.033 3.967 15 C -0.201 4.201 16 C -0.204 4.204 17 C -0.021 4.021 18 C -0.053 4.053 19 O -0.561 6.561 20 Si 0.799 3.201 21 N -0.536 5.536 22 C -0.129 4.129 23 H 0.059 0.941 24 H 0.128 0.872 25 H 0.062 0.938 26 H 0.104 0.896 27 H 0.094 0.906 28 H 0.420 0.580 29 H 0.130 0.870 30 H 0.145 0.855 31 H 0.141 0.859 32 H 0.150 0.850 33 H 0.107 0.893 34 H 0.395 0.605 35 H -0.294 1.294 36 H -0.284 1.284 37 H 0.419 0.581 38 H 0.088 0.912 39 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.052 -2.122 -4.487 5.074 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.067 4.067 2 O -0.280 6.280 3 C 0.311 3.689 4 O -0.429 6.429 5 C -0.122 4.122 6 H 0.173 0.827 7 C -0.156 4.156 8 C 0.019 3.981 9 H 0.109 0.891 10 N -0.353 5.353 11 C 0.303 3.697 12 O -0.449 6.449 13 C -0.107 4.107 14 C -0.081 4.081 15 C -0.225 4.225 16 C -0.229 4.229 17 C -0.135 4.135 18 C -0.163 4.163 19 O -0.368 6.368 20 Si 0.703 3.297 21 N -0.132 5.132 22 C -0.168 4.168 23 H 0.077 0.923 24 H 0.146 0.854 25 H 0.080 0.920 26 H 0.123 0.877 27 H 0.113 0.887 28 H 0.259 0.741 29 H 0.148 0.852 30 H 0.163 0.837 31 H 0.159 0.841 32 H 0.167 0.833 33 H 0.125 0.875 34 H 0.245 0.755 35 H -0.222 1.222 36 H -0.211 1.211 37 H 0.256 0.744 38 H 0.106 0.894 39 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -0.256 -2.169 -3.776 4.362 hybrid contribution -0.935 -0.819 -0.682 1.418 sum -1.191 -2.988 -4.458 5.498 Atomic orbital electron populations 1.23515 0.75192 1.05556 1.02393 1.86520 1.24657 1.33293 1.83502 1.24220 0.92848 0.80941 0.70907 1.90676 1.68007 1.37490 1.46748 1.22801 0.85481 1.01543 1.02397 0.82687 1.23277 0.96293 0.94435 1.01604 1.21661 0.84028 0.96030 0.96413 0.89074 1.45523 1.06364 1.65290 1.18117 1.21018 0.85202 0.77285 0.86234 1.90766 1.86367 1.47839 1.19969 1.20257 0.86744 1.06247 0.97411 1.19936 0.99421 0.89480 0.99275 1.20860 0.99089 0.98780 1.03808 1.20913 1.03579 0.94932 1.03431 1.20959 0.95115 0.95698 1.01690 1.24949 0.99666 1.03932 0.87714 1.86425 1.64921 1.38516 1.46953 0.92920 0.74475 0.82607 0.79667 1.41880 1.25415 1.13232 1.32653 1.23382 0.97617 1.01189 0.94618 0.92253 0.85409 0.91959 0.87739 0.88706 0.74138 0.85175 0.83736 0.84106 0.83255 0.87509 0.75528 1.22165 1.21091 0.74370 0.89391 0.88951 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.15 16 2 O -0.36 -0.61 10.57 -51.40 -0.54 -1.15 16 3 C 0.47 1.12 7.48 71.24 0.53 1.65 16 4 O -0.54 -4.94 15.66 21.96 0.34 -4.59 16 5 C -0.10 0.53 4.13 -11.01 -0.05 0.49 16 6 H 0.16 -1.74 8.14 -2.38 -0.02 -1.76 16 7 C -0.12 0.58 7.14 31.12 0.22 0.80 16 8 C 0.12 -0.46 4.33 45.58 0.20 -0.26 16 9 H 0.09 0.15 7.46 -2.39 -0.02 0.14 16 10 N -0.70 5.07 5.26 -439.76 -2.31 2.76 16 11 C 0.52 -0.68 7.82 87.66 0.69 0.00 16 12 O -0.57 -5.47 15.63 -3.04 -0.05 -5.52 16 13 C -0.07 0.46 6.24 29.10 0.18 0.64 16 14 C 0.03 0.04 5.66 41.08 0.23 0.27 16 15 C -0.20 -0.83 10.76 22.14 0.24 -0.59 16 16 C -0.20 -0.82 9.37 22.14 0.21 -0.62 16 17 C -0.02 -0.07 6.50 41.08 0.27 0.20 16 18 C -0.05 -0.07 3.08 71.23 0.22 0.15 16 19 O -0.56 -1.22 12.88 -148.98 -1.92 -3.14 16 20 Si 0.80 -0.35 30.59 68.60 2.10 1.75 16 21 N -0.54 -0.84 6.07 -171.13 -1.04 -1.88 16 22 C -0.13 0.52 7.44 31.18 0.23 0.75 16 23 H 0.06 -0.04 8.13 -2.39 -0.02 -0.06 16 24 H 0.13 -0.91 8.14 -2.39 -0.02 -0.93 16 25 H 0.06 -0.07 8.13 -2.38 -0.02 -0.09 16 26 H 0.10 -0.87 8.14 -2.39 -0.02 -0.89 16 27 H 0.09 -0.07 7.45 -2.39 -0.02 -0.09 16 28 H 0.42 -6.08 8.70 -92.70 -0.81 -6.89 16 29 H 0.13 -1.65 8.14 -2.39 -0.02 -1.67 16 30 H 0.14 -1.73 8.14 -2.39 -0.02 -1.75 16 31 H 0.14 0.28 8.06 -2.91 -0.02 0.26 16 32 H 0.15 0.12 6.22 -2.91 -0.02 0.10 16 33 H 0.11 0.14 7.96 -2.38 -0.02 0.12 16 34 H 0.39 -1.57 8.70 -74.06 -0.64 -2.22 16 35 H -0.29 -1.72 7.11 99.48 0.71 -1.02 16 36 H -0.28 -1.26 7.11 99.48 0.71 -0.55 16 37 H 0.42 -0.77 8.96 -92.71 -0.83 -1.60 16 38 H 0.09 -0.16 8.09 -2.39 -0.02 -0.18 16 39 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 Total: 0.00 -26.48 338.13 -0.19 -26.67 By element: Atomic # 1 Polarization: -18.41 SS G_CDS: -1.14 Total: -19.55 kcal Atomic # 6 Polarization: 0.28 SS G_CDS: 4.37 Total: 4.65 kcal Atomic # 7 Polarization: 4.23 SS G_CDS: -3.35 Total: 0.88 kcal Atomic # 8 Polarization: -12.23 SS G_CDS: -2.17 Total: -14.39 kcal Atomic # 14 Polarization: -0.35 SS G_CDS: 2.10 Total: 1.75 kcal Total: -26.48 -0.19 -26.67 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_14644196.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.816 kcal (2) G-P(sol) polarization free energy of solvation -26.476 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.292 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.191 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.667 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.483 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds