Wall clock time and date at job start Sat Mar 6 2021 16:04:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34228 * 116.99998 * 2 1 4 4 O 1.20822 * 120.00365 * 359.97438 * 3 2 1 5 5 C 1.50703 * 119.99585 * 180.02562 * 3 2 1 6 6 H 1.08996 * 112.85061 * 48.79963 * 5 3 2 7 7 C 1.53785 * 113.61001 * 179.97438 * 5 3 2 8 8 C 1.53787 * 87.07922 * 140.06426 * 7 5 3 9 9 H 1.08999 * 113.60941 * 219.93340 * 8 7 5 10 10 N 1.46497 * 113.61411 * 89.11348 * 8 7 5 11 11 C 1.34777 * 119.99525 * 156.52516 * 10 8 7 12 12 O 1.21283 * 120.00463 * 0.02562 * 11 10 8 13 13 C 1.50700 * 119.99675 * 179.72583 * 11 10 8 14 14 C 1.53542 * 109.82245 * 279.41101 * 13 11 10 15 15 C 1.53032 * 108.56418 * 179.57427 * 14 13 11 16 16 C 1.50208 * 110.36484 * 49.47520 * 15 14 13 17 17 C 1.50699 * 118.54725 * 160.01378 * 16 15 14 18 18 O 1.42897 * 109.47341 * 69.97920 * 17 16 15 19 19 Si 1.86305 * 109.46864 * 189.98209 * 17 16 15 20 20 C 1.31110 * 122.90047 * 339.99131 * 16 15 14 21 21 N 1.38925 * 121.85350 * 0.40586 * 20 16 15 22 22 C 1.53782 * 87.17311 * 334.52146 * 8 7 5 23 23 H 1.08999 * 109.47277 * 60.00424 * 1 2 3 24 24 H 1.09002 * 109.47662 * 180.02562 * 1 2 3 25 25 H 1.09008 * 109.47373 * 300.00347 * 1 2 3 26 26 H 1.08995 * 113.61808 * 25.51372 * 7 5 3 27 27 H 1.09002 * 113.60904 * 254.61098 * 7 5 3 28 28 H 0.97000 * 120.00580 * 336.53261 * 10 8 7 29 29 H 1.08994 * 109.81687 * 40.27601 * 13 11 10 30 30 H 1.08994 * 109.62562 * 299.23602 * 14 13 11 31 31 H 1.09003 * 109.62118 * 59.79111 * 14 13 11 32 32 H 1.08999 * 109.27556 * 289.22209 * 15 14 13 33 33 H 1.09003 * 109.20320 * 169.68705 * 15 14 13 34 34 H 1.09004 * 109.47084 * 309.97776 * 17 16 15 35 35 H 0.96693 * 113.99820 * 59.99442 * 18 17 16 36 36 H 1.48497 * 109.99856 * 180.02562 * 19 17 16 37 37 H 1.48499 * 109.99626 * 301.31714 * 19 17 16 38 38 H 1.08002 * 119.07344 * 180.38009 * 20 16 15 39 39 H 0.97001 * 120.55983 * 166.66621 * 21 20 16 40 40 H 1.09000 * 113.61457 * 140.02206 * 22 8 7 41 41 H 1.08997 * 113.61654 * 270.92678 * 22 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2747 -0.0006 6 1 4.0233 0.6363 -0.7566 7 6 4.1078 2.7141 -0.0011 8 6 5.1828 2.2264 0.9845 9 1 5.4002 2.9383 1.7807 10 7 6.3909 1.7176 0.3306 11 6 7.5622 1.7021 0.9972 12 8 7.6160 2.1090 2.1385 13 6 8.8038 1.1730 0.3267 14 6 8.8139 -0.3613 0.3860 15 6 10.0789 -0.8674 -0.3109 16 6 11.2868 -0.1380 0.2040 17 6 12.6434 -0.7649 0.0104 18 8 12.9915 -0.7289 -1.3751 19 14 13.9111 0.1818 0.9941 20 6 11.2130 1.0202 0.8141 21 7 9.9978 1.6558 1.0360 22 6 4.1947 1.1229 1.3978 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3634 0.5139 0.8900 26 1 3.4181 3.4403 0.4291 27 1 4.5092 3.0292 -0.9643 28 1 6.3480 1.3919 -0.5821 29 1 8.8321 1.5029 -0.7117 30 1 8.8147 -0.6874 1.4260 31 1 7.9330 -0.7531 -0.1226 32 1 9.9885 -0.7028 -1.3846 33 1 10.1921 -1.9342 -0.1178 34 1 12.6175 -1.7998 0.3517 35 1 13.0334 0.1627 -1.7470 36 1 15.2535 -0.4261 0.8111 37 1 13.9337 1.6018 0.5601 38 1 12.1224 1.4932 1.1540 39 1 9.9379 2.4054 1.6487 40 1 4.6662 0.1541 1.5632 41 1 3.5288 1.4147 2.2098 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_15413834.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 16:04:26 Heat of formation + Delta-G solvation = -99.266425 kcal Electronic energy + Delta-G solvation = -24059.662381 eV Core-core repulsion = 20328.601281 eV Total energy + Delta-G solvation = -3731.061100 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.145 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -42.13798 -41.33108 -40.04743 -38.98611 -37.46757 -37.31733 -34.64933 -33.27441 -32.88625 -29.54606 -27.90767 -27.03000 -26.70020 -25.44677 -23.85352 -22.64614 -22.02998 -20.57131 -19.53962 -19.18214 -18.83128 -18.14474 -17.75116 -17.41175 -17.27258 -16.83811 -16.44392 -16.13817 -15.80007 -15.60919 -15.25689 -15.09887 -14.94556 -14.51238 -14.34956 -14.15353 -13.94071 -13.78270 -13.54171 -13.23684 -13.05355 -12.96188 -12.90141 -12.32254 -12.02743 -12.00854 -11.89884 -11.82746 -11.63396 -11.38648 -11.30490 -10.93308 -10.33154 -10.27554 -8.51996 -4.89270 1.09770 1.27265 1.38893 1.41554 1.60229 1.64121 1.70745 2.03534 2.54062 3.06845 3.14595 3.35003 3.48423 3.54932 3.61941 3.69420 3.80188 3.89478 3.91126 4.12159 4.20005 4.20385 4.30344 4.32684 4.46104 4.52629 4.54690 4.57322 4.61221 4.66315 4.69640 4.71709 4.81130 4.94335 5.15108 5.23227 5.30215 5.33971 5.50733 6.11509 6.28930 6.58354 6.67928 6.76917 6.95869 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.504 6.504 5 C -0.113 4.113 6 H 0.125 0.875 7 C -0.124 4.124 8 C 0.122 3.878 9 H 0.114 0.886 10 N -0.711 5.711 11 C 0.516 3.484 12 O -0.524 6.524 13 C 0.137 3.863 14 C -0.127 4.127 15 C -0.051 4.051 16 C -0.276 4.276 17 C -0.050 4.050 18 O -0.537 6.537 19 Si 0.670 3.330 20 C 0.139 3.861 21 N -0.731 5.731 22 C -0.131 4.131 23 H 0.064 0.936 24 H 0.103 0.897 25 H 0.064 0.936 26 H 0.113 0.887 27 H 0.086 0.914 28 H 0.404 0.596 29 H 0.090 0.910 30 H 0.079 0.921 31 H 0.079 0.921 32 H 0.066 0.934 33 H 0.075 0.925 34 H 0.110 0.890 35 H 0.371 0.629 36 H -0.261 1.261 37 H -0.264 1.264 38 H 0.135 0.865 39 H 0.410 0.590 40 H 0.088 0.912 41 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.794 -1.319 -0.944 2.418 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.391 6.391 5 C -0.132 4.132 6 H 0.143 0.857 7 C -0.162 4.162 8 C 0.016 3.984 9 H 0.132 0.868 10 N -0.363 5.363 11 C 0.302 3.698 12 O -0.399 6.399 13 C 0.027 3.973 14 C -0.166 4.166 15 C -0.089 4.089 16 C -0.287 4.287 17 C -0.161 4.161 18 O -0.343 6.343 19 Si 0.573 3.427 20 C 0.018 3.982 21 N -0.365 5.365 22 C -0.170 4.170 23 H 0.083 0.917 24 H 0.122 0.878 25 H 0.083 0.917 26 H 0.132 0.868 27 H 0.105 0.895 28 H 0.239 0.761 29 H 0.108 0.892 30 H 0.097 0.903 31 H 0.097 0.903 32 H 0.085 0.915 33 H 0.094 0.906 34 H 0.128 0.872 35 H 0.219 0.781 36 H -0.186 1.186 37 H -0.190 1.190 38 H 0.151 0.849 39 H 0.247 0.753 40 H 0.107 0.893 41 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -1.324 -0.942 -0.119 1.630 hybrid contribution -0.553 0.498 -1.461 1.639 sum -1.877 -0.444 -1.580 2.493 Atomic orbital electron populations 1.23330 0.75893 1.04044 1.02738 1.86517 1.23773 1.33322 1.83774 1.23549 0.91659 0.81452 0.72147 1.90691 1.66973 1.36428 1.44983 1.22705 0.87718 1.00975 1.01805 0.85671 1.23358 0.96918 0.94893 1.01022 1.21811 0.83495 0.96436 0.96634 0.86790 1.45630 1.07766 1.65200 1.17666 1.20641 0.84613 0.77904 0.86650 1.90753 1.85486 1.46221 1.17456 1.20989 0.84129 0.95956 0.96215 1.21887 0.99475 0.92164 1.03038 1.19936 0.90315 0.99523 0.99079 1.20901 0.96770 0.97325 1.13657 1.24719 0.97723 1.06714 0.86979 1.86577 1.91246 1.32936 1.23524 0.95283 0.79094 0.77965 0.90352 1.20505 0.88353 0.92533 0.96807 1.44272 1.04441 1.37522 1.50221 1.23440 0.97769 1.01161 0.94599 0.91724 0.87825 0.91723 0.86840 0.89496 0.76077 0.89213 0.90271 0.90281 0.91537 0.90626 0.87243 0.78149 1.18596 1.19021 0.84859 0.75350 0.89342 0.88242 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.26 10.56 -39.25 -0.41 -0.68 16 3 C 0.47 0.42 7.49 36.01 0.27 0.69 16 4 O -0.50 -1.93 15.65 -18.75 -0.29 -2.22 16 5 C -0.11 0.27 4.15 -90.81 -0.38 -0.10 16 6 H 0.13 -0.56 8.14 -51.93 -0.42 -0.99 16 7 C -0.12 0.33 7.15 -25.91 -0.19 0.15 16 8 C 0.12 -0.28 4.29 -67.12 -0.29 -0.57 16 9 H 0.11 -0.08 7.50 -51.93 -0.39 -0.46 16 10 N -0.71 2.26 5.26 -53.02 -0.28 1.98 16 11 C 0.52 -0.34 7.09 -10.98 -0.08 -0.41 16 12 O -0.52 -1.71 15.70 5.55 0.09 -1.62 16 13 C 0.14 -0.25 3.36 -68.51 -0.23 -0.48 16 14 C -0.13 0.27 5.48 -26.43 -0.14 0.12 16 15 C -0.05 0.06 5.85 -28.10 -0.16 -0.10 16 16 C -0.28 0.15 5.37 -101.33 -0.54 -0.40 16 17 C -0.05 0.01 2.81 36.01 0.10 0.11 16 18 O -0.54 -0.78 12.88 -35.23 -0.45 -1.23 16 19 Si 0.67 -0.43 29.97 -169.99 -5.09 -5.52 16 20 C 0.14 -0.11 9.62 -16.08 -0.15 -0.26 16 21 N -0.73 0.49 5.47 -55.34 -0.30 0.19 16 22 C -0.13 0.31 7.45 -25.77 -0.19 0.12 16 23 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 24 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 25 H 0.06 -0.06 8.14 -51.92 -0.42 -0.48 16 26 H 0.11 -0.15 7.44 -51.93 -0.39 -0.54 16 27 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 28 H 0.40 -2.34 8.70 -40.82 -0.36 -2.70 16 29 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 30 H 0.08 -0.04 8.14 -51.93 -0.42 -0.47 16 31 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 32 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 33 H 0.08 -0.07 8.14 -51.93 -0.42 -0.50 16 34 H 0.11 -0.04 7.96 -51.93 -0.41 -0.45 16 35 H 0.37 -0.51 8.70 45.56 0.40 -0.11 16 36 H -0.26 -0.79 7.11 56.52 0.40 -0.39 16 37 H -0.26 -0.27 6.82 56.52 0.39 0.12 16 38 H 0.13 -0.23 4.31 -52.49 -0.23 -0.46 16 39 H 0.41 -0.19 8.10 -40.82 -0.33 -0.52 16 40 H 0.09 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.10 -0.19 8.10 -51.93 -0.42 -0.61 16 LS Contribution 340.42 15.07 5.13 5.13 Total: 0.00 -8.68 340.42 -8.53 -17.21 By element: Atomic # 1 Polarization: -7.14 SS G_CDS: -5.99 Total: -13.12 kcal Atomic # 6 Polarization: 0.80 SS G_CDS: -0.92 Total: -0.12 kcal Atomic # 7 Polarization: 2.75 SS G_CDS: -0.58 Total: 2.17 kcal Atomic # 8 Polarization: -4.68 SS G_CDS: -1.07 Total: -5.75 kcal Atomic # 14 Polarization: -0.43 SS G_CDS: -5.09 Total: -5.52 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -8.68 -8.53 -17.21 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_15413834.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.058 kcal (2) G-P(sol) polarization free energy of solvation -8.680 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.738 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.528 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.209 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.266 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds